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Berliner AJ, Zezulka S, Hutchinson GA, Bertoldo S, Cockell CS, Arkin AP. Domains of life sciences in spacefaring: what, where, and how to get involved. NPJ Microgravity 2024; 10:12. [PMID: 38287000 PMCID: PMC10825151 DOI: 10.1038/s41526-024-00354-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2023] [Accepted: 01/11/2024] [Indexed: 01/31/2024] Open
Affiliation(s)
- Aaron J Berliner
- Center for the Utilization of Biological Engineering in Space (CUBES), Berkeley, CA, USA.
- Department of Bioengineering, University of California Berkeley, Berkeley, CA, USA.
- Program in Aerospace Engineering, University of California Berkeley, Berkeley, CA, USA.
| | - Spencer Zezulka
- Center for the Utilization of Biological Engineering in Space (CUBES), Berkeley, CA, USA
- Department of Bioengineering, University of California Berkeley, Berkeley, CA, USA
- School of Information, University of California Berkeley, Berkeley, CA, USA
| | - Gwyneth A Hutchinson
- Center for the Utilization of Biological Engineering in Space (CUBES), Berkeley, CA, USA
- Department of Bioengineering, University of California Berkeley, Berkeley, CA, USA
| | - Sophia Bertoldo
- Center for the Utilization of Biological Engineering in Space (CUBES), Berkeley, CA, USA
- Department of Bioengineering, University of California Berkeley, Berkeley, CA, USA
| | - Charles S Cockell
- UK Centre for Astrobiology, School of Physics and Astronomy, University of Edinburgh, Edinburgh, UK
| | - Adam P Arkin
- Center for the Utilization of Biological Engineering in Space (CUBES), Berkeley, CA, USA.
- Department of Bioengineering, University of California Berkeley, Berkeley, CA, USA.
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Dossey AT, Oppert B, Chu FC, Lorenzen MD, Scheffler B, Simpson S, Koren S, Johnston JS, Kataoka K, Ide K. Genome and Genetic Engineering of the House Cricket (Acheta domesticus): A Resource for Sustainable Agriculture. Biomolecules 2023; 13:biom13040589. [PMID: 37189337 DOI: 10.3390/biom13040589] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2023] [Revised: 03/10/2023] [Accepted: 03/11/2023] [Indexed: 03/29/2023] Open
Abstract
Background: The house cricket, Acheta domesticus, is one of the most farmed insects worldwide and the foundation of an emerging industry using insects as a sustainable food source. Edible insects present a promising alternative for protein production amid a plethora of reports on climate change and biodiversity loss largely driven by agriculture. As with other crops, genetic resources are needed to improve crickets for food and other applications. Methods: We present the first high quality annotated genome assembly of A. domesticus from long read data and scaffolded to chromosome level, providing information needed for genetic manipulation. Results: Gene groups related to immunity were annotated and will be useful for improving value to insect farmers. Metagenome scaffolds in the A. domesticus assembly, including Invertebrate Iridescent Virus 6 (IIV6), were submitted as host-associated sequences. We demonstrate both CRISPR/Cas9-mediated knock-in and knock-out of A. domesticus and discuss implications for the food, pharmaceutical, and other industries. RNAi was demonstrated to disrupt the function of the vermilion eye-color gene producing a useful white-eye biomarker phenotype. Conclusions: We are utilizing these data to develop technologies for downstream commercial applications, including more nutritious and disease-resistant crickets, as well as lines producing valuable bioproducts, such as vaccines and antibiotics.
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Lewandowski K, Stryjska A. What food will we be eating on our journey to Mars? BIOTECHNOL BIOTEC EQ 2022. [DOI: 10.1080/13102818.2022.2060135] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022] Open
Affiliation(s)
- Krzysztof Lewandowski
- Department of Technical Systems Maintenance and Operation, Faculty of Mechanical Engineering, Wroclaw University of Science and Technology, Wrocław, Poland
| | - Aleksandra Stryjska
- Division of Natural and Applied Sciences, Duke Kunshan University, Kunshan, PR China
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Kelly S, Verheyen C, Cowley A, Bogaerts A. Producing oxygen and fertilizer with the Martian atmosphere by using microwave plasma. Chem 2022. [DOI: 10.1016/j.chempr.2022.07.015] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
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Berliner AJ, Lipsky I, Ho D, Hilzinger JM, Vengerova G, Makrygiorgos G, McNulty MJ, Yates K, Averesch NJH, Cockell CS, Wallentine T, Seefeldt LC, Criddle CS, Nandi S, McDonald KA, Menezes AA, Mesbah A, Arkin AP. Space bioprocess engineering on the horizon. COMMUNICATIONS ENGINEERING 2022; 1:13. [PMCID: PMC10955938 DOI: 10.1038/s44172-022-00012-9] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/12/2022] [Accepted: 05/17/2022] [Indexed: 06/04/2024]
Abstract
Space bioprocess engineering (SBE) is an emerging multi-disciplinary field to design, realize, and manage biologically-driven technologies specifically with the goal of supporting life on long term space missions. SBE considers synthetic biology and bioprocess engineering under the extreme constraints of the conditions of space. A coherent strategy for the long term development of this field is lacking. In this Perspective, we describe the need for an expanded mandate to explore biotechnological needs of the future missions. We then identify several key parameters—metrics, deployment, and training—which together form a pathway towards the successful development and implementation of SBE technologies of the future. Space bioprocess engineering integrates synthetic biology and bioprocess engineering with the specific goal to support human life in long term space missions. In this Perspective, Berliner and colleagues describe a pathway towards the development and implementation of space bioprocessing technologies of the future.
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Affiliation(s)
- Aaron J. Berliner
- Center for the Utilization of Biological Engineering in Space (CUBES), Berkeley, CA USA
- Department of Bioengineering, University of California Berkeley, Berkeley, CA USA
| | - Isaac Lipsky
- Center for the Utilization of Biological Engineering in Space (CUBES), Berkeley, CA USA
- Department of Bioengineering, University of California Berkeley, Berkeley, CA USA
| | - Davian Ho
- Center for the Utilization of Biological Engineering in Space (CUBES), Berkeley, CA USA
- Department of Bioengineering, University of California Berkeley, Berkeley, CA USA
| | - Jacob M. Hilzinger
- Center for the Utilization of Biological Engineering in Space (CUBES), Berkeley, CA USA
- Department of Bioengineering, University of California Berkeley, Berkeley, CA USA
| | - Gretchen Vengerova
- Center for the Utilization of Biological Engineering in Space (CUBES), Berkeley, CA USA
- Department of Bioengineering, University of California Berkeley, Berkeley, CA USA
| | - Georgios Makrygiorgos
- Center for the Utilization of Biological Engineering in Space (CUBES), Berkeley, CA USA
- Department of Chemical and Biomolecular Engineering, University of California Berkeley, Berkeley, CA USA
| | - Matthew J. McNulty
- Center for the Utilization of Biological Engineering in Space (CUBES), Berkeley, CA USA
- Department of Chemical Engineering, University of California, Davis, Davis, CA USA
| | - Kevin Yates
- Center for the Utilization of Biological Engineering in Space (CUBES), Berkeley, CA USA
- Department of Chemical Engineering, University of California, Davis, Davis, CA USA
| | - Nils J. H. Averesch
- Center for the Utilization of Biological Engineering in Space (CUBES), Berkeley, CA USA
- Department of Civil and Environmental Engineering, Stanford University, Stanford, CA USA
| | - Charles S. Cockell
- Center for the Utilization of Biological Engineering in Space (CUBES), Berkeley, CA USA
- UK Centre for Astrobiology, School of Physics and Astronomy, University of Edinburgh, Edinburgh, UK
| | - Tyler Wallentine
- Center for the Utilization of Biological Engineering in Space (CUBES), Berkeley, CA USA
- Department of Chemistry and Biochemistry, Utah State University, Logan, UT USA
| | - Lance C. Seefeldt
- Center for the Utilization of Biological Engineering in Space (CUBES), Berkeley, CA USA
- Department of Chemistry and Biochemistry, Utah State University, Logan, UT USA
| | - Craig S. Criddle
- Center for the Utilization of Biological Engineering in Space (CUBES), Berkeley, CA USA
- Department of Civil and Environmental Engineering, Stanford University, Stanford, CA USA
| | - Somen Nandi
- Center for the Utilization of Biological Engineering in Space (CUBES), Berkeley, CA USA
- Department of Chemical Engineering, University of California, Davis, Davis, CA USA
- Global HealthShare Initiative, Davis, CA USA
| | - Karen A. McDonald
- Center for the Utilization of Biological Engineering in Space (CUBES), Berkeley, CA USA
- Department of Chemical Engineering, University of California, Davis, Davis, CA USA
| | - Amor A. Menezes
- Center for the Utilization of Biological Engineering in Space (CUBES), Berkeley, CA USA
- Department of Mechanical and Aerospace Engineering, University of Florida, Gainesville, FL USA
| | - Ali Mesbah
- Center for the Utilization of Biological Engineering in Space (CUBES), Berkeley, CA USA
- Department of Chemical and Biomolecular Engineering, University of California Berkeley, Berkeley, CA USA
| | - Adam P. Arkin
- Center for the Utilization of Biological Engineering in Space (CUBES), Berkeley, CA USA
- Department of Bioengineering, University of California Berkeley, Berkeley, CA USA
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Food production in hostile environments. FOOD SCIENCE AND TECHNOLOGY 2022. [DOI: 10.1002/fsat.3602_4.x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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Duri LG, Pannico A, Petropoulos SA, Caporale AG, Adamo P, Graziani G, Ritieni A, De Pascale S, Rouphael Y. Bioactive Compounds and Antioxidant Activity of Lettuce Grown in Different Mixtures of Monogastric-Based Manure With Lunar and Martian Soils. Front Nutr 2022; 9:890786. [PMID: 35571954 PMCID: PMC9101051 DOI: 10.3389/fnut.2022.890786] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2022] [Accepted: 03/31/2022] [Indexed: 11/15/2022] Open
Abstract
The supplementation of bioactive compounds in astronaut's diets is undeniable, especially in the extreme and inhospitable habitat of future space settlements. This study aims to enhance the Martian and Lunar regolith fertility (testing two commercial simulants) through the provision of organic matter (manure) as established by in situ resource utilization (ISRU) approach. In this perspective, we obtained 8 different substrates after mixing Mojave Mars Simulant (MMS-1) or Lunar Highlands Simulant (LHS-1), with four different rates of manure (0, 10, 30, and 50%, w/w) from monogastric animals. Then, we assessed how these substrates can modulate fresh yield, organic acid, carotenoid content, antioxidant activity, and phenolic profile of lettuce plants (Lactuca sativa L.). Regarding fresh biomass production, MMS-1-amended substrates recorded higher yields than LHS-1-ones; plants grown on a 70:30 MMS-1/manure mixture produced the highest foliar biomass. Moreover, we found an increase in lutein and β-carotene content by + 181 and + 263%, respectively, when applying the highest percentage of manure (50%) compared with pure simulants or less-amended mixtures. The 50:50 MMS-1/manure treatment also contained the highest amounts of individual and total organic acids, especially malate content. The highest antioxidant activity for the ABTS assay was recorded when no manure was added. The highest content of total hydroxycinnamic acids was observed when no manure was added, whereas ferulic acid content (most abundant compound) was the highest in 70:30 simulant/manure treatment, as well as in pure LHS-1 simulant. The flavonoid content was the highest in pure-simulant treatment (for most of the compounds), resulting in the highest total flavonoid and total phenol content. Our findings indicate that the addition of manure at specific rates (30%) may increase the biomass production of lettuce plants cultivated in MMS-1 simulant, while the phytochemical composition is variably affected by manure addition, depending on the stimulant. Therefore, the agronomic practice of manure amendment showed promising results; however, it must be tested with other species or in combination with other factors, such as fertilization rates and biostimulants application, to verify its applicability in space colonies for food production purposes.
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Affiliation(s)
- Luigi G. Duri
- Department of Agricultural Sciences, University of Naples Federico II, Portici, Italy
| | - Antonio Pannico
- Department of Agricultural Sciences, University of Naples Federico II, Portici, Italy
| | - Spyridon A. Petropoulos
- Department of Agriculture, Crop Production and Rural Environment, University of Thessaly, Volos, Greece
| | - Antonio G. Caporale
- Department of Agricultural Sciences, University of Naples Federico II, Portici, Italy
| | - Paola Adamo
- Department of Agricultural Sciences, University of Naples Federico II, Portici, Italy
- Interdepartmental Research Centre on the “Earth Critical Zone” for Supporting the Landscape and Agroenvironment Management (CRISP), University of Naples Federico II, Portici, Italy
| | - Giulia Graziani
- Department of Pharmacy, University of Naples Federico II, Naples, Italy
| | - Alberto Ritieni
- Department of Pharmacy, University of Naples Federico II, Naples, Italy
| | - Stefania De Pascale
- Department of Agricultural Sciences, University of Naples Federico II, Portici, Italy
| | - Youssef Rouphael
- Department of Agricultural Sciences, University of Naples Federico II, Portici, Italy
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Costello C, Oveysi Z, Dundar B, McGarvey R. Assessment of the Effect of Urban Agriculture on Achieving a Localized Food System Centered on Chicago, IL Using Robust Optimization. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2021; 55:2684-2694. [PMID: 33533256 DOI: 10.1021/acs.est.0c04118] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
In this work, nonrobust (average yield) and robust (varying yield) optimization techniques were applied to find the minimum radius required from the center of Chicago, Illinois, United States (U.S.) and land area by type to meet the population's nutritional needs given yield data for conventional and urban agricultural products. Twenty-eight nutrients were considered, and land type availability was defined using satellite data. No mix of food items were able to satisfy the vitamin D, vitamin B12, and calcium needs within a radius up to 650 km. With vitamin D fortification, radii between 175 and 185 km (nonrobust) and 205 and 220 km (robust) were found across scenarios. The inclusion of urban agriculture reduced the radius by 10-15 km and increased the diversity of foods in the solution. When vitamin B12 was supplemented, the radii could be reduced to 105-120 km (nonrobust) and 115-130 km (robust). This work demonstrates the need to include a full list of nutrients when evaluating the feasibility of localizing food systems. Key nutrient fortification or supplementation may significantly reduce the land area required to meet the nutritional needs of a population.
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Affiliation(s)
- Christine Costello
- Department of Agricultural and Bioengineering, The Pennsylvania University, University Park, Pennsylvania 16802, United States
- The Rock Ethics Institute, The Pennsylvania University, University Park, Pennsylvania 16802, United States
- Industrial and Manufacturing Systems Engineering, University of Missouri, Columbia, Missouri 65211 United States
| | - Zeynab Oveysi
- Industrial and Manufacturing Systems Engineering, University of Missouri, Columbia, Missouri 65211 United States
| | - Bayram Dundar
- Department of Industrial Engineering, Bartin University, Bartin, Turkey
| | - Ronald McGarvey
- Industrial and Manufacturing Systems Engineering, University of Missouri, Columbia, Missouri 65211 United States
- Harry S. Truman School of Public Affairs, University of Missouri, Columbia, Missouri 65211 United States
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Shiwei N, Dritsas S, Fernandez JG. Martian biolith: A bioinspired regolith composite for closed-loop extraterrestrial manufacturing. PLoS One 2020; 15:e0238606. [PMID: 32936806 PMCID: PMC7494075 DOI: 10.1371/journal.pone.0238606] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2020] [Accepted: 08/19/2020] [Indexed: 01/13/2023] Open
Abstract
Given plans to revisit the lunar surface by the late 2020s and to take a crewed mission to Mars by the late 2030s, critical technologies must mature. In missions of extended duration, in situ resource utilization is necessary to both maximize scientific returns and minimize costs. While this present a significantly more complex challenge in the resource-starved environment of Mars, it is similar to the increasing need to develop resource-efficient and zero-waste ecosystems on Earth. Here, we make use of recent advances in the field of bioinspired chitinous manufacturing to develop a manufacturing technology to be used within the context of a minimal, artificial ecosystem that supports humans in a Martian environment.
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Affiliation(s)
- Ng Shiwei
- Engineering Product Development Department, Singapore University of Technology and Design, Singapore, Singapore
| | - Stylianos Dritsas
- Architecture and Sustainable Design Department, Singapore University of Technology and Design, Singapore, Singapore
| | - Javier G. Fernandez
- Engineering Product Development Department, Singapore University of Technology and Design, Singapore, Singapore
- * E-mail:
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Chandler JO, Haas FB, Khan S, Bowden L, Ignatz M, Enfissi EMA, Gawthrop F, Griffiths A, Fraser PD, Rensing SA, Leubner-Metzger G. Rocket Science: The Effect of Spaceflight on Germination Physiology, Ageing, and Transcriptome of Eruca sativa Seeds. Life (Basel) 2020; 10:E49. [PMID: 32344775 PMCID: PMC7235897 DOI: 10.3390/life10040049] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2020] [Revised: 04/19/2020] [Accepted: 04/20/2020] [Indexed: 02/07/2023] Open
Abstract
In the 'Rocket Science' project, storage of Eruca sativa (salad rocket) seeds for six months on board the International Space Station resulted in delayed seedling establishment. Here we investigated the physiological and molecular mechanisms underpinning the spaceflight effects on dry seeds. We found that 'Space' seed germination vigor was reduced, and ageing sensitivity increased, but the spaceflight did not compromise seed viability and the development of normal seedlings. Comparative analysis of the transcriptomes (using RNAseq) in dry seeds and upon controlled artificial ageing treatment (CAAT) revealed differentially expressed genes (DEGs) associated with spaceflight and ageing. DEG categories enriched by spaceflight and CAAT included transcription and translation with reduced transcript abundances for 40S and 60S ribosomal subunit genes. Among the 'spaceflight-up' DEGs were heat shock proteins (HSPs), DNAJ-related chaperones, a heat shock factor (HSFA7a-like), and components of several DNA repair pathways (e.g., ATM, DNA ligase 1). The 'response to radiation' category was especially enriched in 'spaceflight-up' DEGs including HSPs, catalases, and the transcription factor HY5. The major finding from the physiological and transcriptome analysis is that spaceflight causes vigor loss and partial ageing during air-dry seed storage, for which space environmental factors and consequences for seed storage during spaceflights are discussed.
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Affiliation(s)
- Jake O. Chandler
- Department of Biological Sciences, Royal Holloway University of London, Egham TW20 0EX, UK; (J.O.C.); (S.K.); (M.I.); (E.M.A.E.); (P.D.F.)
| | - Fabian B. Haas
- Plant Cell Biology, Faculty of Biology, University of Marburg, 35043 Marburg, Germany; (F.B.H.); (S.A.R.)
| | - Safina Khan
- Department of Biological Sciences, Royal Holloway University of London, Egham TW20 0EX, UK; (J.O.C.); (S.K.); (M.I.); (E.M.A.E.); (P.D.F.)
| | - Laura Bowden
- Official Seed Testing Station for Scotland, SASA, Edinburgh EH12 9FJ, UK;
| | - Michael Ignatz
- Department of Biological Sciences, Royal Holloway University of London, Egham TW20 0EX, UK; (J.O.C.); (S.K.); (M.I.); (E.M.A.E.); (P.D.F.)
| | - Eugenia M. A. Enfissi
- Department of Biological Sciences, Royal Holloway University of London, Egham TW20 0EX, UK; (J.O.C.); (S.K.); (M.I.); (E.M.A.E.); (P.D.F.)
| | | | - Alistair Griffiths
- Science Department, Royal Horticultural Society, Woking, Surrey GU23 6QB, UK;
| | - Paul D. Fraser
- Department of Biological Sciences, Royal Holloway University of London, Egham TW20 0EX, UK; (J.O.C.); (S.K.); (M.I.); (E.M.A.E.); (P.D.F.)
| | - Stefan A. Rensing
- Plant Cell Biology, Faculty of Biology, University of Marburg, 35043 Marburg, Germany; (F.B.H.); (S.A.R.)
| | - Gerhard Leubner-Metzger
- Department of Biological Sciences, Royal Holloway University of London, Egham TW20 0EX, UK; (J.O.C.); (S.K.); (M.I.); (E.M.A.E.); (P.D.F.)
- Laboratory of Growth Regulators, Centre of the Region Haná for Biotechnological and Agricultural Research, Institute of Experimental Botany, Academy of Sciences of the Czech Republic, Palaćky University, 78371 Olomouc, Czech Republic
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