1
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Li Z, Li X, He F. Non-structural carbohydrates contributed to cold tolerance and regeneration of Medicago sativa L. PLANTA 2023; 257:116. [PMID: 37171508 DOI: 10.1007/s00425-023-04154-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/21/2022] [Accepted: 05/05/2023] [Indexed: 05/13/2023]
Abstract
MAIN CONCLUSION Soil water content only affected regeneration time, whereas the NSC content was related to the success of alfalfa regeneration. Non-structural carbohydrates (NSCs) are important factors influencing the overwintering and regeneration of alfalfa. In this study, we analyzed eight in-situ samplings at three depths of coarse roots (crown, 20 and 40 cm depths) during the overwintering period and assessed the dynamic change and allocation of root NSCs under three irrigation frequencies (irrigation once every second day/4 days/8 days). Primary results showed that: (i) before cold acclimation, irrigation once every second day was beneficial to the accumulation of soluble sugars and starch in crown tissues, which would be maintained until the following spring and accelerate the regeneration time of alfalfa; (ii) during the overwintering process, the soluble sugars and starch contents in the crown were significantly higher than those in deeper roots, and there was an asynchronous effect caused by the change in soluble sugars and starch among roots at three depths; and (iii) the change trend of soluble sugar and starch contents was consistent with that of semi-lethal temperature, and there was a significant negative correlation between the content of soluble sugar (R2 = 0.8046) and starch (R2 = 0.6332) and the semi-lethal temperature. This study demonstrated that NSCs are the key driver of cold tolerance and regeneration under the three irrigation frequencies evaluated. Our results provide further insight into the allocation of NSCs in winter. This improved understanding of the mechanism of overwintering will allow for improved water management of alfalfa in high latitude areas.
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Affiliation(s)
- Zhensong Li
- Institute of Animal Science, Chinese Academy of Agricultural Sciences, No.2, Yuanmingyuan West Road, Haidian District, Beijing, 100193, China
| | - Xianglin Li
- Institute of Animal Science, Chinese Academy of Agricultural Sciences, No.2, Yuanmingyuan West Road, Haidian District, Beijing, 100193, China
| | - Feng He
- Institute of Animal Science, Chinese Academy of Agricultural Sciences, No.2, Yuanmingyuan West Road, Haidian District, Beijing, 100193, China.
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2
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Keller M, Scheele-Baldinger R, Ferguson JC, Tarara JM, Mills LJ. Inflorescence temperature influences fruit set, phenology, and sink strength of Cabernet Sauvignon grape berries. FRONTIERS IN PLANT SCIENCE 2022; 13:864892. [PMID: 36046582 PMCID: PMC9420974 DOI: 10.3389/fpls.2022.864892] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/29/2022] [Accepted: 07/26/2022] [Indexed: 05/31/2023]
Abstract
The temperature during the bloom period leading up to fruit set is a key determinant of reproductive success in plants and of harvest yield in crop plants. However, it is often unclear whether differences in yield components result from temperature effects on the whole plant or specifically on the flower or fruit sinks. We used a forced-convection, free-air cooling and heating system to manipulate the inflorescence temperature of field-grown Cabernet Sauvignon grapevines during the bloom period. Temperature regimes included cooling (ambient -7.5°C), heating (ambient +7.5°C), an ambient control, and a convective control. Cooling significantly retarded the time to fruit set and subsequent berry development, and heating shortened the time to fruit set and accelerated berry development relative to the two controls. Fruit set was decreased in cooled inflorescences, but although the cooling regime resulted in the lowest berry number per cluster, it also decreased seed and berry weight at harvest while not affecting seed number. Cooling inflorescences slightly decreased fruit soluble solids and pH, and increased titratable acidity, but did not affect color density. The inflorescence temperature did not impact leaf gas exchange and shoot growth, and shoot periderm formation occurred independently of the timing of fruit ripening. These results suggest that the temperature experienced by grape flowers during bloom time impacts fruit set and subsequent seed and berry development. Suboptimal temperatures not only reduce the proportion of flowers that set fruit but also limit the sink strength of the berries that do develop after fruit set. Shoot vigor and maturation, and leaf physiology, on the other hand, may be rather insensitive to temperature-induced changes in reproductive development.
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Affiliation(s)
- Markus Keller
- Department of Horticulture, Irrigated Agriculture Research and Extension Center, Washington State University, Prosser, WA, United States
| | - Regula Scheele-Baldinger
- Department of Agricultural and Food Sciences, Swiss Federal Institute of Technology, Zürich, Switzerland
| | - John C. Ferguson
- United States Department of Agriculture, Agricultural Research Service, Horticultural Crops Research Unit, Prosser, WA, United States
| | - Julie M. Tarara
- United States Department of Agriculture, Agricultural Research Service, Horticultural Crops Research Unit, Prosser, WA, United States
| | - Lynn J. Mills
- Department of Horticulture, Irrigated Agriculture Research and Extension Center, Washington State University, Prosser, WA, United States
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3
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Pagter M, Kjær KH. Winter warming stimulates vegetative growth and alters fruit quality of blackcurrant (Ribes nigrum). INTERNATIONAL JOURNAL OF BIOMETEOROLOGY 2022; 66:1391-1401. [PMID: 35412081 DOI: 10.1007/s00484-022-02284-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/12/2021] [Revised: 03/03/2022] [Accepted: 04/02/2022] [Indexed: 06/14/2023]
Abstract
The rate of global warming varies in magnitude between seasons, with warming being more pronounced in winter and spring than in summer and autumn at high latitudes. Winter warming can have profound effects on dormancy release and spring phenology of perennial fruit crops, but potential follow-on impacts on growth, fruit yield or quality have only rarely been investigated. We studied the effects of mild winter warming on spring phenology, current year shoot growth, cropping performance and fruit quality in four field-grown cultivars of blackcurrant with different chilling requirements. Plants were exposed to ambient or slightly elevated (+ 0.5 °C) temperatures from early October to mid-April the following year. Winter warming had few effects on spring phenology and fruit yield, but caused significant changes in berry contents of phenolic compounds and a reduction in soluble sugars. Increased vegetative growth of warmed plants likely accounts for the changes in berry quality. The results demonstrate a persistent effect of winter warming on shoot growth, which indirectly changes fruit quality.
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Affiliation(s)
- Majken Pagter
- Department of Chemistry and Bioscience, Aalborg University, Fredrik Bajers vej 7H, 9220, Aalborg, Denmark.
| | - Katrine Heinsvig Kjær
- Department of Food Science, Aarhus University, Agro Food Park 48, 8200, Aarhus, Denmark
- Hortiadvice, Hvidkærvej 29, 5250, Odense, Denmark
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4
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A Review on the Observed Climate Change in Europe and Its Impacts on Viticulture. ATMOSPHERE 2022. [DOI: 10.3390/atmos13050837] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
The European climate is changing displaying profound on agriculture, thus strongly reaching the scientific community’s attention. In this review, the compilation of selected scientific research on the agroclimatic conditions’ changes and their impact on the productivity parameters (phenology timing, product quality and quantity) of grapevines and on the spatiotemporal characteristics of the viticultural areas are attempted for the first time. For this purpose, a thorough investigation through multiple search queries was conducted for the period (2005–2021). Overall, increasing (decreasing) trends in critical temperature (precipitation) parameters are the reality of the recent past with visible impacts on viticulture. The observed climate warming already enforces emerging phenomena related to the modification of the developmental rate (earlier phenological events, shortening of phenological intervals, lengthening of the growing season, earlier harvest), the alteration of product quality, the heterogeneous effects on grapevine yield and the emergence of new cool-climate viticulture areas highlighting the cultivation’s rebirth in the northern and central parts of the continent. The vulnerability of the wine-growing ecosystem urges the integration of innovative and sustainable solutions for confronting the impacts of climate change and safeguarding the production (quantity and quality) capacity of viticultural systems in Europe under a continuously changing environment.
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5
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Schmidt D, Kahlen K, Bahr C, Friedel M. Towards a Stochastic Model to Simulate Grapevine Architecture: A Case Study on Digitized Riesling Vines Considering Effects of Elevated CO 2. PLANTS (BASEL, SWITZERLAND) 2022; 11:801. [PMID: 35336683 PMCID: PMC8953974 DOI: 10.3390/plants11060801] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/07/2022] [Revised: 03/08/2022] [Accepted: 03/15/2022] [Indexed: 11/17/2022]
Abstract
Modeling plant growth, in particular with functional-structural plant models, can provide tools to study impacts of changing environments in silico. Simulation studies can be used as pilot studies for reducing the on-field experimental effort when predictive capabilities are given. Robust model calibration leads to less fragile predictions, while introducing uncertainties in predictions allows accounting for natural variability, resulting in stochastic plant growth models. In this study, stochastic model components that can be implemented into the functional-structural plant model Virtual Riesling are developed relying on Bayesian model calibration with the goal to enhance the model towards a fully stochastic model. In this first step, model development targeting phenology, in particular budburst variability, phytomer development rate and internode growth are presented in detail. Multi-objective optimization is applied to estimate a single set of cardinal temperatures, which is used in phenology and growth modeling based on a development days approach. Measurements from two seasons of grapevines grown in a vineyard with free-air carbon dioxide enrichment (FACE) are used; thus, model building and selection are coupled with an investigation as to whether including effects of elevated CO2 conditions to be expected in 2050 would improve the models. The results show how natural variability complicates the detection of possible treatment effects, but demonstrate that Bayesian calibration in combination with mixed models can realistically recover natural shoot growth variability in predictions. We expect these and further stochastic model extensions to result in more realistic virtual plant simulations to study effects, which are used to conduct in silico studies of canopy microclimate and its effects on grape health and quality.
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Affiliation(s)
- Dominik Schmidt
- Department of Modeling and Systems Analysis, Hochschule Geisenheim University, 65366 Geisenheim, Germany; (K.K.); (C.B.)
| | - Katrin Kahlen
- Department of Modeling and Systems Analysis, Hochschule Geisenheim University, 65366 Geisenheim, Germany; (K.K.); (C.B.)
| | - Christopher Bahr
- Department of Modeling and Systems Analysis, Hochschule Geisenheim University, 65366 Geisenheim, Germany; (K.K.); (C.B.)
| | - Matthias Friedel
- Department of General and Organic Viticulture, Hochschule Geisenheim University, 65366 Geisenheim, Germany;
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6
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Grapevine Response to Stress Generated by Excessive Temperatures during the Budburst. HORTICULTURAE 2022. [DOI: 10.3390/horticulturae8030187] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Abstract
At springtime, the formation of stem somatic traits (stem elongation and leaf growth) and reproductive activity (flowering and fruit set) occur simultaneously. They are all competing carbon sinks, with an extremely high demand for carbohydrates. The shoot growth rate is strongly related to environmental temperature, which, according to climate change scenarios, is expected to increase also in extremes. Our hypothesis was that the increase in temperature during budburst could increase the vegetative carbon sink strength reducing the carbon stock available for the reproductive activity jeopardizing flowering of the next year. In our experiment, we artificially conditioned grapevine budburst by exposing the growing shoots to different temperature regimes. Higher temperatures during the spring vegetative growth favored shoot stem extension at the detriment of shoot leaf area. This caused a reduction in vine CO2 assimilation, which, combined with the competition of the growing vegetative organs, affected the concurrent reproductive activity, with carry-over effects on the following year, resulting in a limited flower initiation in dormant buds. These results suggest that the increase in springtime temperature can alter canopy development and vine physiology, resulting in the reduction in reproductive activity with an economical negative impact on grapevine productivity.
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7
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Phenology and production of Hassaoui grapevines as affected by climate anomalies in Al Ahsa region. Saudi J Biol Sci 2022; 29:1175-1184. [PMID: 35197784 PMCID: PMC8847931 DOI: 10.1016/j.sjbs.2021.09.049] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2021] [Revised: 08/05/2021] [Accepted: 09/13/2021] [Indexed: 11/25/2022] Open
Abstract
Climate change is a dramatic crisis that has left severe impacts on viticulture. Phenological events over 41 years and annual climatic anomalies’ data over these years in Al Ahsa region were procured. Annual temperature and wind speed anomalies had the strongest influence on all phenological events of the varieties White and Red Hassaoui, starting from the beginning of budburst until harvest. Moreover, the average yield of both varieties decreased significantly by 319.4 and 317 kg ha−1 respectively between 1997 and 2019 in comparison with the interval of years 1979–1996. Earlier phenological events were positively correlated with annual temperature anomaly and negatively correlated with annual wind speed anomaly. The latter shortened the dates of occurrence of beginning and full veraison. Yield decreased with higher annual temperature, wind speed and total cloud cover anomalies, and lower annual total precipitation anomaly. Higher annual temperature and wind speed anomalies were correlated with a shorter period between beginning of budburst to beginning of veraison (P3). Shorter periods between beginning and full veraison (P6) and beginning of veraison and harvest (P7) of Red Hassaoui were positively correlated with annual precipitable water anomaly. Results suggest a high level of adaptation of both tested varieties to changing climate conditions in Al Ahsa, though irrigating vines after harvest on a weekly basis would help overcoming the minimal reduction in yield which was caused by the shortage in precipitation.
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Key Words
- Al Ahsa
- Ann PWA, annual precipitable water anomaly
- Ann TA, annual temperature anomaly
- Ann TCCA, annual total cloud cover anomaly
- Ann TPA, annual total precipitation anomaly
- Ann WSA, annual wind speed anomaly
- Climate change
- ECMWF ERA5, European Centre for Medium-Range Weather Forecasts
- GCC, Gulf Cooperation Council
- KSA, Kingdom of Saudi Arabia
- P1, beginning of budburst to beginning of flowering
- P10, full flowering to harvest
- P11, beginning of budburst to harvest
- P2, beginning of budburst to beginning of fruit set
- P3, beginning of budburst to beginning of veraison
- P3, period between beginning of budburst to beginning of veraison
- P4, beginning of flowering to beginning of veraison
- P5, full flowering to full veraison
- P6, beginning to full veraison
- P6, period between beginning and full veraison
- P7, beginning of veraison to harvest
- P7, period between beginning of veraison and harvest
- P8, full veraison to harvest
- P9, beginning of flowering to harvest
- Phenological events
- Saudi Arabia
- UAE, United Arab Emirates
- Viticulture
- Yield
- stage 1, beginning of budburst
- stage 10, full veraison
- stage 11, harvest
- stage 2, full budburst
- stage 3, 2–3 leaves unfolded
- stage 4, visible inflorescence
- stage 5, beginning of flowering
- stage 6, full flowering
- stage 7, beginning of fruit set
- stage 8, full fruit set
- stage 9, beginning of veraison
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8
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Pipan P, Hall A, Rogiers SY, Holzapfel BP. Accuracy of Interpolated Versus In-Vineyard Sensor Climate Data for Heat Accumulation Modelling of Phenology. FRONTIERS IN PLANT SCIENCE 2021; 12:635299. [PMID: 34326852 PMCID: PMC8313810 DOI: 10.3389/fpls.2021.635299] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2020] [Accepted: 06/16/2021] [Indexed: 05/31/2023]
Abstract
BACKGROUND AND AIMS In response to global heating, accurate climate data are required to calculate climatic indices for long-term decisions about vineyard management, vineyard site selection, varieties planted and to predict phenological development. The availability of spatially interpolated climate data has the potential to make viticultural climate analyses possible at specific sites without the expense and uncertainty of collecting climate data within vineyards. The aim of this study was to compare the accuracy and precision of climatic indices calculated using an on-site climate sensor and an interpolated climate dataset to assess whether the effect of spatial variability in climate at this fine spatial scale significantly affects phonological modelling outcomes. METHODS AND RESULTS Four sites comprising two topographically homogenous vineyards and two topographically diverse vineyards in three wine regions in Victoria (Australia) were studied across four growing seasons. A freely available database of interpolated Australian climate data based on government climate station records (Scientific Information for Land Owners, SILO) provided temperature data for grid cells containing the sites (resolution 0.05° latitude by 0.05° longitude, approximately 5 km × 5 km). In-vineyard data loggers collected temperature data for the same time period. The results indicated that the only significant difference between the two climate data sources was the minimum temperatures in the topographically varied vineyards where night-time thermal layering is likely to occur. CONCLUSION The interpolated climate data closely matched the in-vineyard recorded maximum temperatures in all cases and minimum temperatures for the topographically homogeneous vineyards. However, minimum temperatures were not as accurately predicted by the interpolated data for the topographically complex sites. Therefore, this specific interpolated dataset was a reasonable substitute for in-vineyard collected data only for vineyard sites that are unlikely to experience night-time thermal layering. SIGNIFICANCE OF THE STUDY Access to accurate climate data from a free interpolation service, such as SILO provides a valuable tool tomanage blocks or sections within vineyards more precisely for vineyards that do not have a weather station on site. Care, nevertheless, is required to account for minimum temperature discrepancies in topographically varied vineyards, due to the potential for cool air pooling at night, that may not be reflected in interpolated climate data.
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Affiliation(s)
- Paula Pipan
- School of Agriculture and Wine Science, Charles Sturt University, Wagga Wagga, NSW, Australia
- National Wine and Grape Industry Centre, Charles Sturt University, Wagga Wagga, NSW, Australia
| | - Andrew Hall
- Institute for Land, Water and Society, Charles Sturt University, Albury, NSW, Australia
| | - Suzy Y. Rogiers
- National Wine and Grape Industry Centre, Charles Sturt University, Wagga Wagga, NSW, Australia
| | - Bruno P. Holzapfel
- National Wine and Grape Industry Centre, Charles Sturt University, Wagga Wagga, NSW, Australia
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9
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Levin AD, KC AN. Water Deficits Do Not Improve Fruit Quality in Grapevine Red Blotch Virus-Infected Grapevines ( Vitis vinifera L.). FRONTIERS IN PLANT SCIENCE 2020; 11:1292. [PMID: 32973850 PMCID: PMC7472797 DOI: 10.3389/fpls.2020.01292] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/13/2020] [Accepted: 08/07/2020] [Indexed: 06/11/2023]
Abstract
Although deficit irrigation is used to improve fruit quality in healthy grapevines, it can potentially amplify negative effects of viral disease and reduce fruit quality in Grapevine Red Blotch Virus (GRBV) infected grapevines. Therefore, a 2-year field experiment was conducted to understand the interaction between GRBV infection and water deficits on disease development and vine physiology. Well-watered (WW) vines were irrigated at 100% of estimated crop evapotranspiration (ETc), while water deficit (WD) vines received water at 66 and 50% ETc in 2017 and 2018, respectively. Healthy (GRBV-) and infected (GRBV+) vines were confirmed by PCR assays. There were no significant effects of water deficits on foliar symptom onset in either year, but more severe water deficits in 2018 resulted in a more rapid symptom progression. GRBV+ vines had a higher Ψstem compared to GRBV- vines, but the effects of virus only appeared post-veraison and corresponded to decreased leaf gas exchange. In general, vine vegetative and reproductive growth were not reduced in GRBV+ vines. Yields were highest in WW/GRBV+ vines due to larger clusters containing larger berries. Consistent treatment effects on berry primary chemistry were limited to sugars, with no interactions between factors. Water deficits were able to somewhat increase berry anthocyanin concentration in GRBV+ fruit, but the effects were dependent on year. By comparison, virus status and water deficits interacted on skin tannins concentration such that they were decreased in WD/GRBV+ vines, but increased in WD/GRBV- vines. Water deficits had no effect on seed phenolics, with only virus status having a significant diminution. Although keeping GRBV+ vines well-watered may mitigate some of the negative effects of GRBD, these results suggest that water deficits will not improve overall fruit quality in GRBV+ vines. Ultimately, the control of fruit ripening imparted by GRBV infection seems to be stronger than abiotic control imparted by water deficits.
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Affiliation(s)
- Alexander D. Levin
- Department of Horticulture, Oregon State University, Corvallis, OR, United States
- Southern Oregon Research and Extension Center, Oregon State University, Central Point, OR, United States
| | - Achala N. KC
- Southern Oregon Research and Extension Center, Oregon State University, Central Point, OR, United States
- Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR, United States
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10
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Peña Quiñones AJ, Hoogenboom G, Salazar Gutiérrez MR, Stöckle C, Keller M. Comparison of air temperature measured in a vineyard canopy and at a standard weather station. PLoS One 2020; 15:e0234436. [PMID: 32525911 PMCID: PMC7289347 DOI: 10.1371/journal.pone.0234436] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2020] [Accepted: 05/25/2020] [Indexed: 11/18/2022] Open
Abstract
The complex environment within a crop canopy leads to a high variability of the air temperature within the canopy, and, therefore, air temperature measured at a weather station (WS) does not represent the internal energy within a crop. The objectives of this study were to quantify the difference between the air temperature measured at a standard WS and the air temperature within a six-year-old vineyard (cv. Chardonnay) and to determine the degree of uncertainty associated with the assumption that there is no difference between the two temperatures when air temperature is used as input in grapevine models. Thermistors and thermocouples were installed within the vine canopy at heights of 0.5 m and 1.2 m above the soil surface and immediately adjacent to the berry clusters. In the middle of the clusters sensors were installed to determine the temperature of the air surrounding the clusters facing east and west. The data were recorded within the canopy from December 2015 to June 2017 as well as at the standard WS that was installed close to the vineyard (410 m). Significant differences were found between the air temperatures measured at the WS and those within the vineyard during the summer when the average daily minimum air temperature within the canopy was 1.2°C less than at the WS and the average daily maximum air temperature in the canopy was 2.0°C higher than at the WS. The mean maximum air temperature measured in the clusters facing east was 1.5°C higher and west 4.0°C higher than the temperature measured at the WS. Therefore, models that assume that air temperature measured at a weather station is similar to air temperature measured in the vineyard canopy could have greater uncertainty than models that consider the temperature within the canopy.
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Affiliation(s)
- Andrés Javier Peña Quiñones
- AgWeatherNet Program, Washington State University, Prosser, Washington, United States of America
- Department of Biological Systems Engineering, Washington State University, Pullman, Washington, United States of America
- * E-mail:
| | - Gerrit Hoogenboom
- AgWeatherNet Program, Washington State University, Prosser, Washington, United States of America
- Department of Biological Systems Engineering, Washington State University, Pullman, Washington, United States of America
| | - Melba Ruth Salazar Gutiérrez
- Department of Biological Systems Engineering, Washington State University, Pullman, Washington, United States of America
| | - Claudio Stöckle
- Department of Biological Systems Engineering, Washington State University, Pullman, Washington, United States of America
| | - Markus Keller
- Department of Horticulture, Irrigated Agriculture Research and Extension Center, Washington State University, Prosser, Washington, United States of America
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11
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Camargo Alvarez H, Salazar-Gutiérrez M, Zapata D, Keller M, Hoogenboom G. Time-to-event analysis to evaluate dormancy status of single-bud cuttings: an example for grapevines. PLANT METHODS 2018; 14:94. [PMID: 30386412 PMCID: PMC6203998 DOI: 10.1186/s13007-018-0361-0] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/10/2018] [Accepted: 10/19/2018] [Indexed: 05/25/2023]
Abstract
BACKGROUND The reduced growth of plants during the winter causes a lack in the perceptibility of the phenological events making challenging the study of dormancy. For deciduous crops, dormancy is generally determined by evaluating budbreak of single-node cuttings that are exposed to conditions suitable for growth. However, the absence of a statistical basis for analyzing and interpreting the budbreak behavior evaluated as the percent budbreak, the average time to budbreak and the time to reach 50% budbreak, has caused inconsistent and contradictory criteria to identify the dormancy status of different deciduous crops. RESULTS In this study, a method was developed to analyze the duration between sampling and budbreak of single-node cuttings and to estimate the dormancy status for grapevines (Vitis vinifera L.) based on the time-to-event distribution of the observations. This method estimates the probability curve of budbreak for each sample and classifies each curve into paradormancy, endodormancy, and ecodormancy according to the significance when compared to a sample curve estimated from cuttings collected during paradormancy and referred to as "reference." CONCLUSION The approach described in this study provided a comparison of the budbreak distribution of cuttings collected during distinct phases with a confidence of 95%. It also allowed the estimation of the date of occurrence of the dormancy stages for two grapevine cultivars 'Cabernet Sauvignon' and 'Chardonnay,' based on the variability within the sampling season rather than on fixed arbitrary criteria. This approach can also be used to analyze budbreak data of single-node cuttings from other common deciduous crops.
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Affiliation(s)
- Hector Camargo Alvarez
- AgWeatherNet Program, Irrigated Agriculture Research and Extension Center, Washington State University, Prosser, WA 99350 USA
- Present Address: Department of Horticulture, Tree Fruit Research and Extension Center, Washington State University, Wenatchee, WA 98801 USA
| | - Melba Salazar-Gutiérrez
- AgWeatherNet Program, Irrigated Agriculture Research and Extension Center, Washington State University, Prosser, WA 99350 USA
| | - Diana Zapata
- AgWeatherNet Program, Irrigated Agriculture Research and Extension Center, Washington State University, Prosser, WA 99350 USA
- Present Address: Department of Soil and Crop Sciences, Texas A&M University, College Station, TX 77843 USA
| | - Markus Keller
- Department of Horticulture, Washington State University, Prosser, WA 99350 USA
| | - Gerrit Hoogenboom
- AgWeatherNet Program, Irrigated Agriculture Research and Extension Center, Washington State University, Prosser, WA 99350 USA
- Present Address: Institute for Sustainable Food Systems, University of Florida, Gainesville, FL 32611 USA
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12
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Jarvis C, Barlow E, Darbyshire R, Eckard R, Goodwin I. Relationship between viticultural climatic indices and grape maturity in Australia. INTERNATIONAL JOURNAL OF BIOMETEOROLOGY 2017; 61:1849-1862. [PMID: 28540490 DOI: 10.1007/s00484-017-1370-9] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/20/2017] [Revised: 04/26/2017] [Accepted: 04/28/2017] [Indexed: 06/07/2023]
Abstract
Historical temperature data and maturity records were analyzed for 45 vineyard blocks in 15 winegrowing regions across Australia in order to evaluate the suitability of common viticultural indices to estimate date of grape maturity. Five temperature-based viticultural indices (mean January temperature, mean growing season temperature, growing degree days, biologically effective degree days, Huglin Index) along with four springtime temperature indices (mean and maximum temperature summations for September, October, and November; growing degree days and biologically effective degree days modified to include September) were compared to maturity data in order to investigate index relationship to observed maturity timing. Daily heat summations for the months of September, October, and November showed the best correlation to day of year of maturity, suggesting that springtime temperatures are important relative to the timing of grape maturity. Mean January temperature, a commonly used index, had the poorest correlation with day of year of maturity of all the indices included in this study. Indices that included the month of April had poorer correlation than indices that shifted the months included in the growing season to be from September to March inclusive. Calculated index values for the past 30 years for every region included in this study showed increasing temporal trends to various degrees, indicating that all regions studied are experiencing warming temperatures during the growing season. These results emphasize the need to reevaluate viticultural indices in the context of a changing climate.
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Affiliation(s)
- C Jarvis
- Faculty of Veterinary and Agricultural Sciences, University of Melbourne, Parkville, VIC, 3010, Australia.
| | - E Barlow
- Faculty of Veterinary and Agricultural Sciences, University of Melbourne, Parkville, VIC, 3010, Australia
| | - R Darbyshire
- Faculty of Veterinary and Agricultural Sciences, University of Melbourne, Parkville, VIC, 3010, Australia
- NSW Department of Industry, Wagga Wagga Agricultural Research Institute, Wagga Wagga, NSW, 2650, Australia
| | - R Eckard
- Faculty of Veterinary and Agricultural Sciences, University of Melbourne, Parkville, VIC, 3010, Australia
- Agriculture Victoria, Tatura, VIC, 3616, Australia
| | - I Goodwin
- Agriculture Victoria, Tatura, VIC, 3616, Australia
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13
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Cardone MF, D'Addabbo P, Alkan C, Bergamini C, Catacchio CR, Anaclerio F, Chiatante G, Marra A, Giannuzzi G, Perniola R, Ventura M, Antonacci D. Inter-varietal structural variation in grapevine genomes. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2016; 88:648-661. [PMID: 27419916 DOI: 10.1111/tpj.13274] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/16/2015] [Revised: 07/12/2016] [Accepted: 07/13/2016] [Indexed: 05/10/2023]
Abstract
Grapevine (Vitis vinifera L.) is one of the world's most important crop plants, which is of large economic value for fruit and wine production. There is much interest in identifying genomic variations and their functional effects on inter-varietal, phenotypic differences. Using an approach developed for the analysis of human and mammalian genomes, which combines high-throughput sequencing, array comparative genomic hybridization, fluorescent in situ hybridization and quantitative PCR, we created an inter-varietal atlas of structural variations and single nucleotide variants (SNVs) for the grapevine genome analyzing four economically and genetically relevant table grapevine varieties. We found 4.8 million SNVs and detected 8% of the grapevine genome to be affected by genomic variations. We identified more than 700 copy number variation (CNV) regions and more than 2000 genes subjected to CNV as potential candidates for phenotypic differences between varieties.
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Affiliation(s)
- Maria Francesca Cardone
- Consiglio per la ricerca in agricoltura e l'analisi dell'economia agraria (CREA)-Unità di ricerca per l'uva da tavola e la vitivinicoltura in ambiente mediterraneo, Research Unit for viticulture and enology in Southern Italy, Turi (BA), Italy
| | - Pietro D'Addabbo
- Dipartimento di Biologia, Università degli Studi di Bari 'Aldo Moro', Bari, Italy
| | - Can Alkan
- Department of Computer Engineering, Bilkent University, Ankara, TR-06800, Turkey
| | - Carlo Bergamini
- Consiglio per la ricerca in agricoltura e l'analisi dell'economia agraria (CREA)-Unità di ricerca per l'uva da tavola e la vitivinicoltura in ambiente mediterraneo, Research Unit for viticulture and enology in Southern Italy, Turi (BA), Italy
| | | | - Fabio Anaclerio
- Dipartimento di Biologia, Università degli Studi di Bari 'Aldo Moro', Bari, Italy
| | - Giorgia Chiatante
- Consiglio per la ricerca in agricoltura e l'analisi dell'economia agraria (CREA)-Unità di ricerca per l'uva da tavola e la vitivinicoltura in ambiente mediterraneo, Research Unit for viticulture and enology in Southern Italy, Turi (BA), Italy
- Dipartimento di Biologia, Università degli Studi di Bari 'Aldo Moro', Bari, Italy
| | - Annamaria Marra
- Dipartimento di Biologia, Università degli Studi di Bari 'Aldo Moro', Bari, Italy
| | - Giuliana Giannuzzi
- Dipartimento di Biologia, Università degli Studi di Bari 'Aldo Moro', Bari, Italy
- Center for Integrative Genomics, University of Lausanne, 1015 Lausanne, Switzerland
| | - Rocco Perniola
- Consiglio per la ricerca in agricoltura e l'analisi dell'economia agraria (CREA)-Unità di ricerca per l'uva da tavola e la vitivinicoltura in ambiente mediterraneo, Research Unit for viticulture and enology in Southern Italy, Turi (BA), Italy
| | - Mario Ventura
- Dipartimento di Biologia, Università degli Studi di Bari 'Aldo Moro', Bari, Italy
| | - Donato Antonacci
- Consiglio per la ricerca in agricoltura e l'analisi dell'economia agraria (CREA)-Unità di ricerca per l'uva da tavola e la vitivinicoltura in ambiente mediterraneo, Research Unit for viticulture and enology in Southern Italy, Turi (BA), Italy
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14
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Zapata D, Salazar M, Chaves B, Keller M, Hoogenboom G. Estimation of the base temperature and growth phase duration in terms of thermal time for four grapevine cultivars. INTERNATIONAL JOURNAL OF BIOMETEOROLOGY 2015; 59:1771-1781. [PMID: 25903759 DOI: 10.1007/s00484-015-0985-y] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/21/2014] [Revised: 03/10/2015] [Accepted: 03/14/2015] [Indexed: 06/04/2023]
Abstract
Thermal time models have been used to predict the development of many different species, including grapevine (Vitis vinifera L.). These models normally assume that there is a linear relationship between temperature and plant development. The goal of this study was to estimate the base temperature and duration in terms of thermal time for predicting veraison for four grapevine cultivars. Historical phenological data for four cultivars that were collected in the Pacific Northwest were used to develop the thermal time model. Base temperatures (T b) of 0 and 10 °C and the best estimated T b using three different methods were evaluated for predicting veraison in grapevine. Thermal time requirements for each individual cultivar were evaluated through analysis of variance, and means were compared using the Fisher's test. The methods that were applied to estimate T b for the development of wine grapes included the least standard deviation in heat units, the regression coefficient, and the development rate method. The estimated T b varied among methods and cultivars. The development rate method provided the lowest T b values for all cultivars. For the three methods, Chardonnay had the lowest T b ranging from 8.7 to 10.7 °C, while the highest T b values were obtained for Riesling and Cabernet Sauvignon with 11.8 and 12.8 °C, respectively. Thermal time also differed among cultivars, when either the fixed or estimated T b was used. Predictions of the beginning of ripening with the estimated temperature resulted in the lowest variation in real days when compared with predictions using T b = 0 or 10 °C, regardless of the method that was used to estimate the T b.
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Affiliation(s)
- D Zapata
- AgWeatherNet, Washington State University, 24106 North Bunn Road, Prosser, WA, 99350, USA
| | - M Salazar
- AgWeatherNet, Washington State University, 24106 North Bunn Road, Prosser, WA, 99350, USA.
| | - B Chaves
- AgWeatherNet, Washington State University, 24106 North Bunn Road, Prosser, WA, 99350, USA
| | - M Keller
- Department of Horticulture, Irrigated Agriculture Research and Extension Center, Washington State University, Prosser, WA, 99350, USA
| | - G Hoogenboom
- AgWeatherNet, Washington State University, 24106 North Bunn Road, Prosser, WA, 99350, USA
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15
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Keller M, Deyermond LS, Bondada BR. Plant hydraulic conductance adapts to shoot number but limits shoot vigour in grapevines. FUNCTIONAL PLANT BIOLOGY : FPB 2015; 42:366-375. [PMID: 32480681 DOI: 10.1071/fp14206] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/30/2014] [Accepted: 11/19/2014] [Indexed: 06/11/2023]
Abstract
The rate of shoot growth (vigour) in grapevines tends to decrease as the number of shoots per plant increases. Because the underlying causes of this relationship remain unclear, they were studied by variable pruning of field-grown, deficit-irrigated Merlot grapevines (Vitis vinifera L.). Shoot number ranged from 11 to 124 per vine and was inversely correlated with shoot growth rate, leaf appearance rate, axillary bud outgrowth, internode length, leaf size, shoot leaf area, carbon partitioned to the fruit (Cfruit) per shoot, average daily maximum photosynthesis (Amax), stomatal conductance (gmax), and leaf-specific hydraulic conductance (Kl). Shoot number was positively correlated with canopy leaf area, whole-vine Cfruit, whole-plant hydraulic conductance (Kv), and canopy conductance (Kc). Higher shoot vigour was associated with higher Amax, gmax, predawn leaf water potential (Ψpd), shoot hydraulic conductance (Ks), Kl, and Kv. Vigorous shoots supported both more vegetative growth and more reproductive growth; thus fruit growth did not compete with shoot growth for photosynthates. These results indicate that the hydraulic capacity of grapevines adapts to varying shoot numbers to support leaf physiology, growth, and carbon partitioning, but adaptation may be limited, putting upper bounds on the growth of individual shoots and fruit.
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Affiliation(s)
- Markus Keller
- Department of Horticulture, Washington State University, Irrigated Agriculture Research and Extension Center, Prosser, WA 99350, USA
| | - Laura S Deyermond
- Department of Horticulture, Washington State University, Irrigated Agriculture Research and Extension Center, Prosser, WA 99350, USA
| | - Bhaskar R Bondada
- Department of Horticulture, Washington State University Tri-Cities, Richland, WA 99354, USA
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16
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Greer DH, Weedon MM. Does the hydrocooling of Vitis vinifera cv. Semillon vines protect the vegetative and reproductive growth processes and vine performance against high summer temperatures? FUNCTIONAL PLANT BIOLOGY : FPB 2014; 41:620-633. [PMID: 32481018 DOI: 10.1071/fp13286] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/01/2013] [Accepted: 12/21/2013] [Indexed: 06/11/2023]
Abstract
A hydrocooling system applied to Semillon (Vitis vinifera L.) grapevines as a means of protecting the vines from recurrent high temperatures. This system was assessed for impacts on vegetative and reproductive growth and development as well as for carbon economy of vines growing in vineyard conditions. The system maintained canopy temperatures at 35°C over the growing season. Leaf and bunch biomass and yield were all higher in the hydrocooled compared with control vines: the major effect was on dynamics of leaf and berry expansion. Leaf expansion was delayed and occurred over a longer duration whereas berry expansion was advanced and occurred over a longer duration than in control vines. Berry ripening was also faster in the hydrocooled vines and berries had accumulated more sugar at harvest. Leaf photosynthesis along the shoot was also higher in hydrocooled than control vines and there was a significant effect of leaf position on rates of photosynthesis of the hydrocooled vines but not with control vines. However, no differences were observed in the net shoot carbon budget. Lowered canopy temperatures were beneficial for yield and berry composition and, therefore, the cooling system warrants adoption in vineyards at risk from high temperature events during the growing season.
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Affiliation(s)
- Dennis H Greer
- National Wine and Grape Industry Centre, School of Agricultural and Wine Sciences, Charles Sturt University, Locked Bag 588 Wagga Wagga, NSW 2678, Australia
| | - Mark M Weedon
- National Wine and Grape Industry Centre, School of Agricultural and Wine Sciences, Charles Sturt University, Locked Bag 588 Wagga Wagga, NSW 2678, Australia
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Eltom M, Trought M, Winefield C. The effects of cane girdling before budbreak on shoot growth, leaf area and carbohydrate content of Vitis vinifera L. Sauvignon Blanc grapevines. FUNCTIONAL PLANT BIOLOGY : FPB 2013; 40:749-757. [PMID: 32481147 DOI: 10.1071/fp12278] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/07/2012] [Accepted: 03/22/2013] [Indexed: 06/11/2023]
Abstract
The influence of restricting available carbohydrates (CHOs) on shoot growth was studied by cane girdling field grown Vitis vinifera L. Sauvignon Blanc grapevines before budbreak. Canes were girdled 5, 10 or 20cm from the terminal bud of the cane, and the shoot growth of the terminal bud was monitored over the course of a single growing season. A linear relationship was found between the initial rate of shoot growth and the amount of cane isolated by the girdle. A decrease in available CHOs during initial shoot growth appeared to inhibit the shoot's ability to produce new vegetative nodes past the point of discontinuity, resulting in a decrease in total leaf area due to incomplete leaf expansion. The transition from the vine's dependence on reserve CHOs to a net positive state appeared to occur when shoot growth reached a steady state. In the case of severe CHO restriction, no lateral growth occurred, suggesting the CHO status in the vine may play a role in lateral bud growth. The cross-sectional area of canes or shoots were shown to have a linear relationship to their CHO content, which allows for an estimation of the amount of CHOs required to obtain growth similar to the control treatment. Additionally, main shoot leaf area can be used to predict total CHO content in the shoot at harvest.
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Affiliation(s)
- Mark Eltom
- Department of Wine, Food and Molecular Biosciences, Lincoln University, PO Box 84, Christchurch 7647, New Zealand
| | - Mike Trought
- The New Zealand Institute for Plant & Food Research Limited, Marlborough Wine Research Centre, PO Box 845, Blenheim 7240, New Zealand
| | - Chris Winefield
- Department of Wine, Food and Molecular Biosciences, Lincoln University, PO Box 84, Christchurch 7647, New Zealand
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McFadyen L, Robertson D, Sedgley M, Kristiansen P, Olesen T. Time of pruning affects fruit abscission, stem carbohydrates and yield of macadamia. FUNCTIONAL PLANT BIOLOGY : FPB 2012; 39:481-492. [PMID: 32480799 DOI: 10.1071/fp11254] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/11/2011] [Accepted: 04/09/2012] [Indexed: 05/19/2023]
Abstract
Macadamia (Macadamia integrifolia Maiden and Betche, M. tetraphylla Johnson and hybrids) orchards in Australia are typically hedged around anthesis (September). Such hedging reduces yields, largely through competition for carbohydrates between early fruit set and the post-pruning vegetative flush, but also through a reduction in photosynthetic capacity caused by the loss of canopy. We examined whether hedging at other times might mitigate yield losses. Hedging time was found to affect yields across four cultivars: 'A4', 'A38', '344' and '816'. Yield losses were lower for trees hedged in November-December than for trees hedged in September. Yields for trees hedged in June were higher than for trees hedged in September in one experiment, but were similar in a second experiment. Yield losses for September and October hedging were similar. Hedging time changed the pattern of fluctuations in stem water-soluble carbohydrates (WSC). WSC declined shortly after hedging in September, October or November, and the declines preceded increases in fruit abscission relative to unpruned control trees. The increase in fruit abscission was less pronounced for the trees hedged in November, consistent with the idea that fruit become less sensitive to carbon limitation as they mature.
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Affiliation(s)
- Lisa McFadyen
- NSW Department of Primary Industries, 1243 Bruxner Highway, Wollongbar, NSW 2477, Australia
| | - David Robertson
- NSW Department of Primary Industries, 1243 Bruxner Highway, Wollongbar, NSW 2477, Australia
| | - Margaret Sedgley
- The University of New England, Faculty of Arts and Sciences, Armidale, NSW 2351, Australia
| | - Paul Kristiansen
- The University of New England, Faculty of Arts and Sciences, Armidale, NSW 2351, Australia
| | - Trevor Olesen
- NSW Department of Primary Industries, 1243 Bruxner Highway, Wollongbar, NSW 2477, Australia
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