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Pillon Y, Hopkins HCF, Maurin O, Epitawalage N, Bradford J, Rogers ZS, Baker WJ, Forest F. Phylogenomics and biogeography of Cunoniaceae (Oxalidales) with complete generic sampling and taxonomic realignments. AMERICAN JOURNAL OF BOTANY 2021; 108:1181-1200. [PMID: 34278558 PMCID: PMC8361763 DOI: 10.1002/ajb2.1688] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/25/2020] [Accepted: 04/16/2021] [Indexed: 05/28/2023]
Abstract
PREMISE Cunoniaceae are a family of shrubs and trees with 27 genera and ca. 335 species, mostly confined to tropical and wet temperate zones of the southern hemisphere. There are several known issues regarding generic limits, and the family also displays a number of intriguing long-range disjunctions. METHODS We performed a phylogenomic study using the universal Angiosperms353 probe set for targeted sequence capture. We sampled 37 species covering all genera in the Cunoniaceae, and those in the three closely related families of the crown Oxalidales (Brunelliaceae, Cephalotaceae, and Elaeocarpaceae). We also performed analyses for molecular dating and ancestral area reconstruction. RESULTS We recovered the topology (Cunoniaceae, (Cephalotaceae, (Brunelliaceae, Elaeocarpaceae))) and a well-resolved genus-level phylogeny of Cunoniaceae with strongly supported clades corresponding to all previously recognized tribes. As previously suspected, the genera Ackama and Weinmannia were recovered as paraphyletic. Australasia was inferred as the likely ancestral area for the family. CONCLUSIONS The current distribution of Cunoniaceae is best explained by long-distance dispersal with a few possible cases of Australasian-American vicariance events. Extinctions may have been important in determining the mostly Oceanian distribution of this family while some genera in the tribe Cunonieae and in New Caledonia have undergone recent bursts of diversification. New generic diagnoses, 80 new combinations, and one new name are provided for a recircumscribed Ackama (including Spiraeopsis), a much smaller Weinmannia (mostly New World), and a resurrected Pterophylla to accommodate Old World taxa previously in Weinmannia.
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Affiliation(s)
- Yohan Pillon
- LSTMIRDINRAE, CIRADInstitut AgroUniv. MontpellierMontpellierFrance
| | | | | | | | | | - Zachary S. Rogers
- New Mexico State UniversityBox 30003MSC 3‐ILas CrucesNM88003‐8003USA
| | | | - Félix Forest
- Royal Botanic GardensKew, RichmondSurreyTW9 3AEUK
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Jud NA, Gandolfo MA. Fossil evidence from South America for the diversification of Cunoniaceae by the earliest Palaeocene. ANNALS OF BOTANY 2021; 127:305-315. [PMID: 32860407 PMCID: PMC7872129 DOI: 10.1093/aob/mcaa154] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 08/27/2020] [Indexed: 06/01/2023]
Abstract
BACKGROUND AND AIMS Cunoniaceae are woody plants with a distribution that suggests a complex history of Gondwanan vicariance, long-distance dispersal, diversification and extinction. Only four out of ~27 genera in Cunoniaceae are native to South America today, but the discovery of extinct species from Argentine Patagonia is providing new information about the history of this family in South America. METHODS We describe fossil flowers collected from early Danian (early Palaeocene, ~64 Mya) deposits of the Salamanca Formation. We compare them with similar flowers from extant and extinct species using published literature and herbarium specimens. We used simultaneous analysis of morphology and available chloroplast DNA sequences (trnL-F, rbcL, matK, trnH-psbA) to determine the probable relationship of these fossils to living Cunoniaceae and the co-occurring fossil species Lacinipetalum spectabilum. KEY RESULTS Cunoniantha bicarpellata gen. et sp. nov. is the second species of Cunoniaceae to be recognized among the flowers preserved in the Salamanca Formation. Cunoniantha flowers are pentamerous and complete, the anthers contain in situ pollen, and the gynoecium is bicarpellate and syncarpous with two free styles. Phylogenetic analysis indicates that Cunoniantha belongs to crown-group Cunoniaceae among the core Cunoniaceae clade, although it does not have obvious affinity with any tribe. Lacinipetalum spectabilum, also from the Salamanca Formation, belongs to the Cunoniaceae crown group as well, but close to tribe Schizomerieae. CONCLUSIONS Our findings highlight the importance of West Gondwana in the evolution of Cunoniaceae during the early Palaeogene. The co-occurrence of C. bicarpellata and L. spectabilum, belonging to different clades within Cunoniaceae, indicates that the diversification of crown-group Cunoniaceae was under way by 64 Mya.
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Affiliation(s)
- Nathan A Jud
- Department of Biology, William Jewell College, Liberty, MO, USA
| | - Maria A Gandolfo
- L. H. Bailey Hortorium, Plant Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, NY, USA
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Carpenter RJ, Rozefelds AC. Gondwanan or global? A commentary on: 'Fossil evidence from South America for the diversification of Cunoniaceae by the earliest Palaeocene'. ANNALS OF BOTANY 2021; 127:iii-v. [PMID: 33274378 PMCID: PMC7872120 DOI: 10.1093/aob/mcaa192] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
This article comments on: Nathan A. Jud and Maria A. Gandolfo, Fossil evidence from South America for the diversification of Cunoniaceae by the earliest Palaeocene, Annals of Botany, Volume 127, Issue 3, 16 February 2021, Pages 305–315, https://doi.org/10.1093/aob/mcaa154
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Affiliation(s)
| | - Andrew C Rozefelds
- Queensland Museum, South Brisbane, Qld Australia
- School of Engineering and Technology, Central Queensland University, Rockhampton, Qld, Australia
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Zamaloa MC, Gandolfo MA, Nixon KC. 52 million years old Eucalyptus flower sheds more than pollen grains. AMERICAN JOURNAL OF BOTANY 2020; 107:1763-1771. [PMID: 33274448 PMCID: PMC7839439 DOI: 10.1002/ajb2.1569] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/09/2020] [Accepted: 08/25/2020] [Indexed: 06/12/2023]
Abstract
PREMISE Fossils provide fundamental evidence of the evolutionary processes that crafted today's biodiversity and consequently for understanding life on Earth. We report the finding of Myrtaceidites eucalyptoides pollen grains preserved within the anthers of a 52-million-year-old Eucalyptus flower collected at Laguna del Hunco locality of Argentinean Patagonia and discuss its implications in understanding the evolutionary history of the iconic Australian genus Eucalyptus. METHODS Pollen grains were extracted from the flower's anthers and were then observed under light microscopy and scanning electron microscopy. The phylogenetic position of the fossil was investigated by adding pollen data to a previously published total-evidence matrix and analyzing it using parsimony. RESULTS We erect the species Eucalyptus xoshemium for the fossil flower. Pollen extracted from E. xoshemium belongs to the species Myrtaceidites eucalyptoides, which, until now, was only known as dispersed pollen. The numerous pollen grains recovered from the single flower allowed estimation of M. eucalyptoides' variability. Results of the phylogenetic analysis reinforce the position of this fossil within crown group Eucalyptus. CONCLUSIONS The discovery of these pollen grains within a Patagonian Eucalyptus fossil flower confirms the hypothesis that Myrtaceidites eucalyptoides represents fossil pollen in the Eucalyptus lineage, extends the geographic and stratigraphic fossil pollen record, and supports an earlier age for crown-group eucalypts.
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Affiliation(s)
- Maria C. Zamaloa
- Museo Paleontológico Egidio FeruglioAvda. Fontana 140Trelew, Chubut9100Argentina
| | - Maria A. Gandolfo
- LH Bailey HortoriumPlant Biology SectionSchool of Integrative Plant ScienceCornell UniversityIthacaNY14853USA
| | - Kevin C. Nixon
- LH Bailey HortoriumPlant Biology SectionSchool of Integrative Plant ScienceCornell UniversityIthacaNY14853USA
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Persistent biotic interactions of a Gondwanan conifer from Cretaceous Patagonia to modern Malesia. Commun Biol 2020; 3:708. [PMID: 33239710 PMCID: PMC7689466 DOI: 10.1038/s42003-020-01428-9] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2020] [Accepted: 10/22/2020] [Indexed: 11/09/2022] Open
Abstract
Many plant genera in the tropical West Pacific are survivors from the paleo-rainforests of Gondwana. For example, the oldest fossils of the Malesian and Australasian conifer Agathis (Araucariaceae) come from the early Paleocene and possibly latest Cretaceous of Patagonia, Argentina (West Gondwana). However, it is unknown whether dependent ecological guilds or lineages of associated insects and fungi persisted on Gondwanan host plants like Agathis through time and space. We report insect-feeding and fungal damage on Patagonian Agathis fossils from four latest Cretaceous to middle Eocene floras spanning ca. 18 Myr and compare it with damage on extant Agathis. Very similar damage was found on fossil and modern Agathis, including blotch mines representing the first known Cretaceous-Paleogene boundary crossing leaf-mine association, external foliage feeding, galls, possible armored scale insect (Diaspididae) covers, and a rust fungus (Pucciniales). The similar suite of damage, unique to fossil and extant Agathis, suggests persistence of ecological guilds and possibly the component communities associated with Agathis since the late Mesozoic, implying host tracking of the genus across major plate movements that led to survival at great distances. The living associations, mostly made by still-unknown culprits, point to previously unrecognized biodiversity and evolutionary history in threatened rainforest ecosystems.
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Wilf P. Eocene " Chusquea" fossil from Patagonia is a conifer, not a bamboo. PHYTOKEYS 2020; 139:77-89. [PMID: 32076379 PMCID: PMC7010844 DOI: 10.3897/phytokeys.139.48717] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2019] [Accepted: 01/15/2020] [Indexed: 05/20/2023]
Abstract
Chusquea oxyphylla Freng. & Parodi, 1941, a fossilized leafy branch from the early Eocene (52 Ma), late-Gondwanan Laguna del Hunco biota of southern Argentina, is still cited as the oldest potential bamboo fossil and as evidence for a Gondwanan origin of bamboos. On recent examination, the holotype specimen was found to lack any typical bamboo characters such as nodes, sheaths, ligules, pseudopetioles, or parallel leaf venation. Instead, it has decurrent, clasping, univeined, heterofacially twisted leaves with thickened, central-longitudinal bands of presumed transfusion tissue. These and other features allow confident placement in the living Neotropical and West Pacific disjunct genus Retrophyllum (Podocarpaceae), which was recently described from the same fossil site based on abundant, well-preserved material. However, the 1941 fossil holds nomenclatural priority, requiring the new combination Retrophyllum oxyphyllum (Freng. & Parodi) Wilf, comb. nov. No reliable bamboo fossils remain from Gondwana, and the oldest South American bamboo fossils are Pliocene. Chusquea joins a growing list of living New World genera that are no longer included in Paleogene Patagonian floras, whose extant relatives are primarily concentrated in Australasia and Malesia via the ancient Gondwanan route through Antarctica.
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Affiliation(s)
- Peter Wilf
- Department of Geosciences, Pennsylvania State University, University Park, PA 16802, USAPennsylvania State UniversityUniversity ParkUnited States of America
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Wilf P, Nixon KC, Gandolfo MA, Cúneo NR. Eocene Fagaceae from Patagonia and Gondwanan legacy in Asian rainforests. Science 2019; 364:364/6444/eaaw5139. [PMID: 31171664 DOI: 10.1126/science.aaw5139] [Citation(s) in RCA: 32] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2018] [Accepted: 04/23/2019] [Indexed: 01/18/2023]
Abstract
The beech-oak family Fagaceae dominates forests from the northern temperate zone to tropical Asia and Malesia, where it reaches its southern limit. We report early Eocene infructescences of Castanopsis, a diverse and abundant fagaceous genus of Southeast Asia, and co-occurring leaves from the 52-million-year-old Laguna del Hunco flora of southern Argentina. The fossil assemblage notably includes many plant taxa that associate with Castanopsis today. The discovery reveals novel Gondwanan history in Fagaceae and the characteristic tree communities of Southeast Asian lower-montane rainforests. The living diaspora associations persisted through Cenozoic climate change and plate movements as the constituent lineages tracked post-Gondwanan mesic biomes over thousands of kilometers, underscoring their current vulnerability to rapid climate change and habitat loss.
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Affiliation(s)
- Peter Wilf
- Department of Geosciences, Pennsylvania State University, University Park, PA 16802, USA.
| | - Kevin C Nixon
- Liberty Hyde Bailey Hortorium, Plant Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853, USA
| | - Maria A Gandolfo
- Liberty Hyde Bailey Hortorium, Plant Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853, USA
| | - N Rubén Cúneo
- CONICET, Museo Paleontológico Egidio Feruglio, 9100 Trelew, Chubut, Argentina
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Jud NA, Gandolfo MA, Iglesias A, Wilf P. Fossil flowers from the early Palaeocene of Patagonia, Argentina, with affinity to Schizomerieae (Cunoniaceae). ANNALS OF BOTANY 2018; 121:431-442. [PMID: 29309506 PMCID: PMC5838809 DOI: 10.1093/aob/mcx173] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/17/2017] [Accepted: 11/09/2017] [Indexed: 06/01/2023]
Abstract
Background and Aims Early Palaeocene (Danian) plant fossils from Patagonia provide information on the recovery from the end-Cretaceous extinction and Cenozoic floristic change in South America. Actinomorphic flowers with eight to ten perianth parts are described and evaluated in a phylogenetic framework. The goal of this study is to determine the identity of these fossil flowers and to discuss their evolutionary, palaeoecological and biogeographical significance. Methods More than 100 fossilized flowers were collected from three localities in the Danian Salamanca and Peñas Coloradas Formations in southern Chubut. They were prepared, photographed and compared with similar extant and fossil flowers using published literature and herbarium specimens. Phylogenetic analysis was performed using morphological and molecular data. Key results The fossil flowers share some but not all the synapomorphies that characterize the Schizomerieae, a tribe within Cunoniaceae. These features include the shallow floral cup, variable number of perianth parts arranged in two whorls, laciniate petals, anthers with a connective extension, and a superior ovary with free styles. The number of perianth parts is doubled and the in situ pollen is tricolporate, with a surface more like that of other Cunoniaceae outside Schizomerieae, such as Davidsonia or Weinmannia. Conclusions An extinct genus of crown-group Cunoniaceae is recognized and placed along the stem lineage leading to Schizomerieae. Extant relatives are typical of tropical to southern-temperate rainforests, and these fossils likely indicate a similarly warm and wet temperate palaeoclimate. The oldest reliable occurrences of the family are fossil pollen and wood from the Upper Cretaceous of the Antarctica and Argentina, whereas in Australia the family first occurs in upper Palaeocene deposits. This discovery demonstrates that the family survived the Cretaceous-Palaeogene boundary event in Patagonia and that diversification of extant lineages in the family was under way by the earliest Cenozoic.
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Affiliation(s)
- Nathan A Jud
- L. H. Bailey Hortorium, Plant Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, NY, USA
| | - Maria A Gandolfo
- L. H. Bailey Hortorium, Plant Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, NY, USA
| | - Ari Iglesias
- Universidad Nacional del Comahue, Instituto de Investigaciones en Biodiversidad y Ambiente INIBIOMA-CONICET, San Carlos de Bariloche, Rio Negro, Argentina
| | - Peter Wilf
- Department of Geosciences, Pennsylvania State University, University Park, PA, USA
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Poinar GO, Chambers KL. Tropidogyne pentaptera,sp. nov., a new mid-Cretaceous fossil angiosperm flower in Burmese amber. ACTA ACUST UNITED AC 2017. [DOI: 10.18476/pale.v10.a10] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Alix K, Gérard PR, Schwarzacher T, Heslop-Harrison JS(P. Polyploidy and interspecific hybridization: partners for adaptation, speciation and evolution in plants. ANNALS OF BOTANY 2017; 120:183-194. [PMID: 28854567 PMCID: PMC5737848 DOI: 10.1093/aob/mcx079] [Citation(s) in RCA: 167] [Impact Index Per Article: 23.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/14/2017] [Accepted: 05/31/2017] [Indexed: 05/15/2023]
Abstract
BACKGROUND Polyploidy or whole-genome duplication is now recognized as being present in almost all lineages of higher plants, with multiple rounds of polyploidy occurring in most extant species. The ancient evolutionary events have been identified through genome sequence analysis, while recent hybridization events are found in about half of the world's crops and wild species. Building from this new paradigm for understanding plant evolution, the papers in this Special Issue address questions about polyploidy in ecology, adaptation, reproduction and speciation of wild and cultivated plants from diverse ecosystems. Other papers, including this review, consider genomic aspects of polyploidy. APPROACHES Discovery of the evolutionary consequences of new, evolutionarily recent and ancient polyploidy requires a range of approaches. Large-scale studies of both single species and whole ecosystems, with hundreds to tens of thousands of individuals, sometimes involving 'garden' or transplant experiments, are important for studying adaptation. Molecular studies of genomes are needed to measure diversity in genotypes, showing ancestors, the nature and number of polyploidy and backcross events that have occurred, and allowing analysis of gene expression and transposable element activation. Speciation events and the impact of reticulate evolution require comprehensive phylogenetic analyses and can be assisted by resynthesis of hybrids. In this Special Issue, we include studies ranging in scope from experimental and genomic, through ecological to more theoretical. CONCLUSIONS The success of polyploidy, displacing the diploid ancestors of almost all plants, is well illustrated by the huge angiosperm diversity that is assumed to originate from recurrent polyploidization events. Strikingly, polyploidization often occurred prior to or simultaneously with major evolutionary transitions and adaptive radiation of species, supporting the concept that polyploidy plays a predominant role in bursts of adaptive speciation. Polyploidy results in immediate genetic redundancy and represents, with the emergence of new gene functions, an important source of novelty. Along with recombination, gene mutation, transposon activity and chromosomal rearrangement, polyploidy and whole-genome duplication act as drivers of evolution and divergence in plant behaviour and gene function, enabling diversification, speciation and hence plant evolution.
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Affiliation(s)
- Karine Alix
- GQE – Le Moulon, INRA, Université Paris-Sud, CNRS, AgroParisTech, Université Paris-Saclay, 91190 Gif-sur-Yvette, France
- For correspondence. E-mail
| | - Pierre R. Gérard
- GQE – Le Moulon, INRA, Université Paris-Sud, CNRS, AgroParisTech, Université Paris-Saclay, 91190 Gif-sur-Yvette, France
| | - Trude Schwarzacher
- Department of Genetics and Genome Biology, University of Leicester, Leicester, UK
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