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Trojan A, Lone YC, Briceno I, Trojan J. Anti-Gene IGF-I Vaccines in Cancer Gene Therapy: A Review of a Case of Glioblastoma. Curr Med Chem 2024; 31:1983-2002. [PMID: 38031775 DOI: 10.2174/0109298673237968231106095141] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2022] [Revised: 06/27/2023] [Accepted: 10/10/2023] [Indexed: 12/01/2023]
Abstract
OBJECTIVE Vaccines for the deadliest brain tumor - glioblastoma (GBM) - are generally based on targeting growth factors or their receptors, often using antibodies. The vaccines described in the review were prepared to suppress the principal cancer growth factor - IGF-I, using anti-gene approaches either of antisense (AS) or of triple helix (TH) type. Our objective was to increase the median survival of patients treated with AS and TH cell vaccines. METHODOLOGY The cells were transfected in vitro by both constructed IGF-I AS and IGF-I TH expression episomal vectors; part of these cells was co-cultured with plant phytochemicals, modulating IGF-I expression. Both AS and TH approaches completely suppressed IGF-I expression and induced MHC-1 / B7 immunogenicity related to the IGF-I receptor signal. RESULTS This immunogenicity proved to be stronger in IGF-I TH than in IGF-I AS-prepared cell vaccines, especially in TH / phytochemical cells. The AS and TH vaccines generated an important TCD8+ and TCD8+CD11b- immune response in treated GBM patients and increased the median survival of patients up to 17-18 months, particularly using TH vaccines; in some cases, 2- and 3-year survival was reported. These clinical results were compared with those obtained in therapies targeting other growth factors. CONCLUSION The anti-gene IGF-I vaccines continue to be applied in current GBM personalized medicine. Technical improvements in the preparation of AS and TH vaccines to increase MHC-1 and B7 immunogenicity have, in parallel, allowed to increase in the median survival of patients.
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Affiliation(s)
- Annabelle Trojan
- INSERM UMR 1197, Cancer Center & University of Paris / Saclay, PO Box: 94802 Villejuif, France
- Faculty of Medicine, University of Cartagena, PO Box: 130014 Cartagena de Indias, Colombia
| | - Yu-Chun Lone
- INSERM UMR 1197, Cancer Center & University of Paris / Saclay, PO Box: 94802 Villejuif, France
- CEDEA / ICGT - Center of Oncological Diseases Diagnosis, PO Box: 110231 Bogota, Colombia
| | - Ignacio Briceno
- Faculty of Medicine, University of La Sabana, PO Box: 250008 Chia, Colombia
| | - Jerzy Trojan
- INSERM UMR 1197, Cancer Center & University of Paris / Saclay, PO Box: 94802 Villejuif, France
- CEDEA / ICGT - Center of Oncological Diseases Diagnosis, PO Box: 110231 Bogota, Colombia
- National Academy of Medicine - ANM, PO Box: 75272 Paris, France
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Strelin MM, Zattara EE, Ullrich K, Schallenberg-Rüdinger M, Rensing S. Delayed differentiation of epidermal cells walls can underlie pedomorphosis in plants: the case of pedomorphic petals in the hummingbird-pollinated Caiophora hibiscifolia (Loasaceae, subfam. Loasoideae) species. EvoDevo 2022; 13:1. [PMID: 34980236 PMCID: PMC8725396 DOI: 10.1186/s13227-021-00186-x] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2021] [Accepted: 12/12/2021] [Indexed: 01/11/2023] Open
Abstract
Background Understanding the relationship between macroevolutionary diversity and variation in organism development is an important goal of evolutionary biology. Variation in the morphology of several plant and animal lineages is attributed to pedomorphosis, a case of heterochrony, where an ancestral juvenile shape is retained in an adult descendant. Pedomorphosis facilitated morphological adaptation in different plant lineages, but its cellular and molecular basis needs further exploration. Plant development differs from animal development in that cells are enclosed by cell walls and do not migrate. Moreover, in many plant lineages, the differentiated epidermis of leaves, and leaf-derived structures, such as petals, limits organ growth. We, therefore, proposed that pedomorphosis in leaves, and in leaf-derived structures, results from delayed differentiation of epidermal cells with respect to reproductive maturity. This idea was explored for petal evolution, given the importance of corolla morphology for angiosperm reproductive success. Results By comparing cell morphology and transcriptional profiles between 5 mm flower buds and mature flowers of an entomophile and an ornitophile Loasoideae species (a lineage that experienced transitions from bee- to hummingbird-pollination), we show that evolution of pedomorphic petals of the ornithophile species likely involved delayed differentiation of epidermal cells with respect to flower maturity. We also found that developmental mechanisms other than pedomorphosis might have contributed to evolution of corolla morphology. Conclusions Our results highlight a need for considering alternatives to the flower-centric perspective when studying the origin of variation in flower morphology, as this can be generated by developmental processes that are also shared with leaves. Graphical Abstract ![]()
Supplementary Information The online version contains supplementary material available at 10.1186/s13227-021-00186-x.
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Affiliation(s)
- Marina M Strelin
- Grupo de Investigación en Ecología de la Polinización, Laboratorio Ecotono, INIBIOMA (CONICET - Universidad Nacional del Comahue), San Carlos de Bariloche, Río Negro, Argentina.
| | - Eduardo E Zattara
- Grupo de Investigación en Ecología de la Polinización, Laboratorio Ecotono, INIBIOMA (CONICET - Universidad Nacional del Comahue), San Carlos de Bariloche, Río Negro, Argentina
| | - Kristian Ullrich
- Department of Evolutionary Biology, August Thienemann Str. 2, 24306, Plön, Germany
| | - Mareike Schallenberg-Rüdinger
- IZMB - Institut für Zelluläre und Molekulare Botanik, Abt. Molekulare Evolution, University of Bonn, Kirschallee 1, 53115, Bonn, Germany
| | - Stefan Rensing
- Plant Cell Biology, Department of Biology, University of Marburg, Marburg, Germany
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Strelin MM, Cosacov A, Chalcoff VR, Maubecin CC, Sérsic AN, Benitez-Vieyra SM. The role of ontogenetic allometry and nonallometric flower shape variation in species-level adaptive diversification - Calceolaria polyrhiza (Calceolariaceae) as a case study. Evol Dev 2021; 23:231-243. [PMID: 33372721 DOI: 10.1111/ede.12363] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2020] [Revised: 10/08/2020] [Accepted: 11/14/2020] [Indexed: 12/14/2022]
Abstract
Organism shape changes predictably during ontogeny, resulting in specific patterns of ontogenetic allometry. In several plant and animal lineages, among-species variation in the shape of mature organisms mirrors variation along their growth trajectories. Hence, ontogenetic allometry is an important bias in evolution. This bias should be stronger at reduced evolutionary time scales, in which among-trait correlations had less time to evolve. Nevertheless, it was shown that adaptation of organism shape frequently involved departures from the ancestral ontogenetic allometry. Moreover, only a moderate fraction of shape variation is correlated with size during ontogeny. Hence, nonallometric variation in shape (NAVSh) is likely to contribute to adaptation, even at reduced evolutionary time scales. We explored the contributions of allometric variation in shape (AVSh), NAVSh, and size variation to adaptive evolution in the angiosperm species Calceolaria polyrhiza. This strongly relies on oil-collecting bees for pollination and experienced transitions in the size of pollinators during the last 2 Ma. Using geometric morphometrics, we described corolla morphology in several populations across its distribution range. Variation in corolla shape was decomposed into an allometric and a nonallometric component, and corolla size was estimated. We then looked for the correlation between these aspects of morphology and the pollinator. Our results suggest that adaptation to pollinators with different sizes relied on NAVSh, which resulted from shifts in the allometric slope and from shape changes that occurred early in flower development. We conclude that NAVSh can contribute to adaptation in flowering plants, even at the species-level.
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Affiliation(s)
- Marina M Strelin
- Grupo de Investigación en Ecología de la Polinización, Laboratorio Ecotono, INIBIOMA (CONICET - Universidad Nacional del Comahue), San Carlos de Bariloche, Río Negro, Argentina
| | - Andrea Cosacov
- Laboratorio de Ecología Evolutiva y Biología Floral, IMBIV (CONICET-Universidad Nacional de Córdoba), Córdoba, Argentina
| | - Vanina R Chalcoff
- Grupo de Investigación en Ecología de la Polinización, Laboratorio Ecotono, INIBIOMA (CONICET - Universidad Nacional del Comahue), San Carlos de Bariloche, Río Negro, Argentina
| | - Constanza C Maubecin
- Laboratorio de Ecología Evolutiva y Biología Floral, IMBIV (CONICET-Universidad Nacional de Córdoba), Córdoba, Argentina
| | - Alicia N Sérsic
- Laboratorio de Ecología Evolutiva y Biología Floral, IMBIV (CONICET-Universidad Nacional de Córdoba), Córdoba, Argentina
| | - Santiago M Benitez-Vieyra
- Laboratorio de Ecología Evolutiva y Biología Floral, IMBIV (CONICET-Universidad Nacional de Córdoba), Córdoba, Argentina
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Gurung V, Yuan YW, Diggle PK. Comparative analysis of corolla tube development across three closely related Mimulus species with different pollination syndromes. Evol Dev 2021; 23:244-255. [PMID: 33410592 DOI: 10.1111/ede.12368] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2020] [Revised: 12/14/2020] [Accepted: 12/18/2020] [Indexed: 01/24/2023]
Abstract
Fusion of petals to form a corolla tube is considered a key innovation contributing to the diversification of many flowering plant lineages. Corolla tube length often varies dramatically among species and is a major determinant of pollinator preference. However, our understanding of the developmental dynamics underlying corolla tube length variation is very limited. Here we examined corolla tube growth in the Mimulus lewisii species complex, an emerging model system for studying the developmental genetics and evo-devo of pollinator-associated floral traits. We compared developmental and cellular processes associated with corolla tube length variation among the bee-pollinated M. lewisii, the hummingbird-pollinated Mimulus verbenaceus, and the self-pollinated Mimulus parishii. We found that in all three species, cell size is non-uniformly distributed along the mature tube, with the longest cells just distal to the stamen insertion site. Differences in corolla tube length among the three species are not associated with processes of organogenesis or early development but are associated with variation in multiple processes occurring later in development, including the location and duration of cell division and cell elongation. The tube growth curves of the small-flowered M. parishii and large-flowered M. lewisii are essentially indistinguishable, except that M. parishii tubes stop growing earlier at a smaller size, suggesting a critical role of heterochrony in the shift from outcrossing to selfing. These results not only highlight the developmental process associated with corolla tube variation among species but also provide a baseline reference for future developmental genetic analyses of mutants or transgenic plants with altered corolla tube morphology in this emerging model system.
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Affiliation(s)
- Vandana Gurung
- Department of Ecology and Evolutionary Biology, University of Connecticut, Storrs, Connecticut, USA
| | - Yao-Wu Yuan
- Department of Ecology and Evolutionary Biology, University of Connecticut, Storrs, Connecticut, USA
| | - Pamela K Diggle
- Department of Ecology and Evolutionary Biology, University of Connecticut, Storrs, Connecticut, USA
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Wessinger CA, Hileman LC. Parallelism in Flower Evolution and Development. ANNUAL REVIEW OF ECOLOGY EVOLUTION AND SYSTEMATICS 2020. [DOI: 10.1146/annurev-ecolsys-011720-124511] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Flower evolution is characterized by widespread repetition, with adaptations to pollinator environment evolving in parallel. Recent studies have expanded our understanding of the developmental basis of adaptive floral novelties—petal fusion, bilateral symmetry, heterostyly, and floral dimensions. In this article, we describe patterns of trait evolution and review developmental genetic mechanisms underlying floral novelties. We discuss the diversity of mechanisms for parallel adaptation, the evidence for constraints on these mechanisms, and how constraints help explain observed macroevolutionary patterns. We describe parallel evolution resulting from similarities at multiple hierarchical levels—genetic, developmental, morphological, functional—which indicate general principles in floral evolution, including the central role of hormone signaling. An emerging pattern is mutational bias that may contribute to rapid patterns of parallel evolution, especially if the derived trait can result from simple degenerative mutations. We argue that such mutational bias may be less likely to govern the evolution of novelties patterned by complex developmental pathways.
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Affiliation(s)
- Carolyn A. Wessinger
- Department of Biological Sciences, University of South Carolina, Columbia, South Carolina 29208, USA
| | - Lena C. Hileman
- Department of Ecology and Evolutionary Biology, University of Kansas, Lawrence, Kansas 66045, USA
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van de Kerke SJ, van Engelenhoven T, van Es AL, Schat L, van Son LM, Vink S, Hemerik L, van Velzen R, Schranz ME, Bakker FT. Capturing variation in floral shape: a virtual3D based morphospace for Pelargonium. PeerJ 2020; 8:e8823. [PMID: 32274266 PMCID: PMC7130111 DOI: 10.7717/peerj.8823] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2019] [Accepted: 02/28/2020] [Indexed: 12/03/2022] Open
Abstract
Background Variation in floral shapes has long fascinated biologists and its modelling enables testing of evolutionary hypotheses. Recent comparative studies that explore floral shape have largely ignored 3D floral shape. We propose quantifying floral shape by using geometric morphometrics on a virtual3D model reconstructed from 2D photographical data and demonstrate its performance in capturing shape variation. Methods This approach offers unique benefits to complement established imaging techniques (i) by enabling adequate coverage of the potential morphospace of large and diverse flowering-plant clades; (ii) by circumventing asynchronicity in anthesis of different floral parts; and (iii) by incorporating variation in copy number of floral organs within structures. We demonstrate our approach by analysing 90 florally-diverse species of the Southern African genus Pelargonium (Geraniaceae). We quantify Pelargonium floral shapes using 117 landmarks and show similarities in reconstructed morphospaces for nectar tube, corolla (2D datasets), and a combined virtual3D dataset. Results Our results indicate that Pelargonium species differ in floral shape, which can also vary extensively within a species. PCA results of the reconstructed virtual3D floral models are highly congruent with the separate 2D morphospaces, indicating it is an accurate, virtual, representation of floral shape. Through our approach, we find that adding the third dimension to the data is crucial to accurately interpret the manner of, as well as levels of, shape variation in flowers.
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Affiliation(s)
- Sara J van de Kerke
- Biosystematics Group, Wageningen University and Research, Wageningen, Netherlands.,Hortus Botanicus Amsterdam, Amsterdam, Netherlands
| | | | - Anne L van Es
- Biosystematics Group, Wageningen University and Research, Wageningen, Netherlands
| | - Laura Schat
- Biosystematics Group, Wageningen University and Research, Wageningen, Netherlands.,Department of Ecology, Environment and Plant Sciences, Stockholm University, Stockholm, Sweden
| | - Lisa M van Son
- Biosystematics Group, Wageningen University and Research, Wageningen, Netherlands
| | - Sverre Vink
- Biosystematics Group, Wageningen University and Research, Wageningen, Netherlands
| | - Lia Hemerik
- Biometris, Department of Mathematical and Statistical Methods, Wageningen University and Research, Wageningen, Netherlands
| | - Robin van Velzen
- Biosystematics Group, Wageningen University and Research, Wageningen, Netherlands
| | - M Eric Schranz
- Biosystematics Group, Wageningen University and Research, Wageningen, Netherlands
| | - Freek T Bakker
- Biosystematics Group, Wageningen University and Research, Wageningen, Netherlands
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Zhou ZL, Duan YW, Luo Y, Yang YP, Zhang ZQ. Cell number explains the intraspecific spur-length variation in an Aquilegia species. PLANT DIVERSITY 2019; 41:307-314. [PMID: 31934675 PMCID: PMC6951270 DOI: 10.1016/j.pld.2019.06.001] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/22/2019] [Revised: 06/06/2019] [Accepted: 06/10/2019] [Indexed: 06/10/2023]
Abstract
Variations of nectar spur length allow pollinators to utilize resources in novel ways, leading to the different selective pressures on spurs and allowing taxa to diversify. However, the mechanisms underlying spur length variation remain unclear. Interspecific comparisons of spur length suggest that both cell division and anisotropic expansion could explain the changes of spur length, and that hormone-related genes contribute to the process of spur formation. In contrast, little is known about intraspecific spur length variation. In Aquilegia rockii, spur length varies strikingly, ranging from 1 mm to 18 mm. To examine the potential mechanisms underlying spur length variation in A. rockii, we observed cell morphology and analyzed RNA-seq of short- and long-spurred flowers. Scanning electron microscopy revealed that at two positions on spurs there were no differences in either cell density or cell anisotropy between short- and long-spurred flowers, suggesting that in A. rockii changes in cell number may explain variations in spur length. In addition, we screened transcriptomes of short- and long-spurred flowers for differentially expressed genes; this screen identified several genes linked to cell division (e.g., F-box, CDKB2-2, and LST8), a finding which is consistent with our analysis of the cellular morphology of spurs. However, we did not find any highly expressed genes involved in the hormone pathway in long-spurred flowers. In contrast to previous hypotheses that anisotropic cell expansion leads to interspecific spur variation in Aquilegia, our results suggest that cell number changes and related genes are mainly responsible for spur length variations of A. rockii. Furthermore, the underlying mechanisms of similar floral traits in morphology may be quite different, enriching our understanding of the mechanisms of flower diversity in angiosperms.
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Affiliation(s)
- Zhi-Li Zhou
- Institute of Tibetan Plateau Research at Kunming, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Yuan-Wen Duan
- Institute of Tibetan Plateau Research at Kunming, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, China
| | - Yan Luo
- Gardening and Horticulture Department, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Mengla, 666303, China
| | - Yong-Ping Yang
- Institute of Tibetan Plateau Research at Kunming, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, China
| | - Zhi-Qiang Zhang
- Laboratory of Ecology and Evolutionary Biology, Yunnan University, Kunming, 650091, China
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