Schäfer RA, Voß B. VisualGraphX: interactive graph visualization within Galaxy.
Bioinformatics 2016;
32:3525-3527. [PMID:
27412091 DOI:
10.1093/bioinformatics/btw414]
[Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2016] [Revised: 06/06/2016] [Accepted: 06/23/2016] [Indexed: 11/14/2022] Open
Abstract
MOTIVATION
We developed VisualGraphX, a web-based, interactive visualization tool for large-scale graphs. Current graph visualization tools that follow the rich-internet paradigm lack an interactive and scalable visualization of graph-based data. VisualGraphX aims to provide a universal graph visualization tool that empowers the users to efficiently explore the data for themselves at a large scale. It is available as a visualization plugin for the Galaxy platform, such that VisualGraphX can be integrated into custom analysis pipelines.
AVAILABILITY AND IMPLEMENTATION
VisualGraphX has been released as a visualization plugin for the Galaxy platform under AFL 3.0 and is available with instructions and application data at http://gitlab.com/comptrans/VisualGraphX/ CONTACT: bjoern.voss@ibvt.uni-stuttgart.de.
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