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Fischer L, Möller Palau-Ribes F, Kipper S, Weiss M, Landgraf C, Lierz M. Absence of Mycoplasma spp. in nightingales (Luscinia megarhynchos) and blue (Cyanistes caeruleus) and great tits (Parus major) in Germany and its potential implication for evolutionary studies in birds. EUR J WILDLIFE RES 2021. [DOI: 10.1007/s10344-021-01554-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Abstract
AbstractMycoplasma spp. are important pathogens in poultry and cause high economic losses for poultry industry worldwide. In other bird species (e.g. white storks, birds of prey, and several waterfowl species), Mycoplasma spp. are regularly found in healthy individuals, hence, considered apathogenic or part of the microbiota of the upper respiratory tract. However, as Mycoplasma spp. are absent in healthy individuals of some wild bird species, they might play a role as respiratory pathogen in these bird species, e.g. Mycoplasma gallisepticum in house finches. The knowledge on the occurrence of Mycoplasma spp. in wild birds is limited. To evaluate the relevance of Mycoplasma spp. in free-ranging nightingales and tits, 172 wild caught birds were screened for the presence of mycoplasmas. The birds were sampled via choanal swabs and examined via molecular methods (n = 172) and, when possible, via culture (n = 142). The Mycoplasma sp. was determined by sequencing the 16S rRNA gene and 16S-23S Intergenic Transcribed Spacer Region. All birds were tested negative for mycoplasmas via PCR and/or mycoplasmal culture. Hence, free-ranging nightingales and tits do not show any mycoplasma in their microbial flora of the respiratory tract. Therefore, these songbird species may suffer from clinical mycoplasmosis when being infected. We hypothesize that birds relying on their vocal ability for reproduction have excluded mycoplasmas from their respiratory flora compared to other bird species.
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Jäckel D, Mortega KG, Sturm U, Brockmeyer U, Khorramshahi O, Voigt-Heucke SL. Opportunities and limitations: A comparative analysis of citizen science and expert recordings for bioacoustic research. PLoS One 2021; 16:e0253763. [PMID: 34181671 PMCID: PMC8238189 DOI: 10.1371/journal.pone.0253763] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2020] [Accepted: 06/11/2021] [Indexed: 11/29/2022] Open
Abstract
Citizen science is an approach that has become increasingly popular in recent years. Despite this growing popularity, there still is widespread scepticism in the academic world about the validity and quality of data from citizen science projects. And although there might be great potential, citizen science is a rarely used approach in the field of bioacoustics. To better understand the possibilities, but also the limitations, we here evaluated data generated in a citizen science project on nightingale song as a case study. We analysed the quantity and quality of song recordings made in a non-standardized way with a smartphone app by citizen scientists and the standardized recordings made with professional equipment by academic researchers. We made comparisons between the recordings of the two approaches and among the user types of the app to gain insights into the temporal recording patterns, the quantity and quality of the data. To compare the deviation of the acoustic parameters in the recordings with smartphones and professional devices from the original song recordings, we conducted a playback test. Our results showed that depending on the user group, citizen scientists produced many to a lot of recordings of valid quality for further bioacoustic research. Differences between the recordings provided by the citizen and the expert group were mainly caused by the technical quality of the devices used—and to a lesser extent by the citizen scientists themselves. Especially when differences in spectral parameters are to be investigated, our results demonstrate that the use of the same high-quality recording devices and calibrated external microphones would most likely improve data quality. We conclude that many bioacoustic research questions may be carried out with the recordings of citizen scientists. We want to encourage academic researchers to get more involved in participatory projects to harness the potential of citizen science—and to share scientific curiosity and discoveries more directly with society.
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Affiliation(s)
- Denise Jäckel
- Museum für Naturkunde Berlin, Leibniz Institute for Evolution and Biodiversity Science, Berlin, Germany
- Life Sciences Faculty, Humboldt-Universität zu Berlin, Berlin, Germany
| | - Kim G Mortega
- Museum für Naturkunde Berlin, Leibniz Institute for Evolution and Biodiversity Science, Berlin, Germany
| | - Ulrike Sturm
- Museum für Naturkunde Berlin, Leibniz Institute for Evolution and Biodiversity Science, Berlin, Germany
| | - Ulrich Brockmeyer
- Museum für Naturkunde Berlin, Leibniz Institute for Evolution and Biodiversity Science, Berlin, Germany
| | - Omid Khorramshahi
- Museum für Naturkunde Berlin, Leibniz Institute for Evolution and Biodiversity Science, Berlin, Germany
| | - Silke L Voigt-Heucke
- Museum für Naturkunde Berlin, Leibniz Institute for Evolution and Biodiversity Science, Berlin, Germany
- Animal Behaviour, Institute of Biology, Freie Universität Berlin, Berlin, Germany
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Deoniziak K, Osiejuk TS. Habitat-related differences in song structure and complexity in a songbird with a large repertoire. BMC Ecol 2019; 19:40. [PMID: 31533798 PMCID: PMC6749692 DOI: 10.1186/s12898-019-0255-7] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2018] [Accepted: 09/05/2019] [Indexed: 11/24/2022] Open
Abstract
Background Urbanisation has been shown to influence many aspects of animal vocal communication. Much attention has been paid to anthropogenic noise, which is often described as one of the most challenging disturbances for urban dwellers. While a large body of literature describes associations between vocal behavior of avian populations and background noise level, most of these studies were conducted on species with relatively simple songs and small repertoire sizes. This study focuses on the song thrush, Turdus philomelos, a common Eurasian songbird with a complex singing style and large syllable repertoire. Our objective was to determine whether frequency, repertoire and temporal organisation of song parameters vary between birds inhabiting urban and adjacent forest habitats in which ambient noise levels differ. Results Songs of urban males were found to be more complex than in conspecifics from natural forest populations. Urban dwellers possessed greater syllable repertoires and repeated syllable sequences more often. In addition, they used a smaller proportion of whistles and a higher proportion of twitter syllables when singing compared to the nonurban males. Moreover, we found significant differences in the minimum and peak frequency of the whistle syllable between studied populations. Conclusions These findings may be an example of adaptation of acoustic communication in noisy urban environments, but we also discuss other possible explanations. We emphasize the need for further investigation into the relationships between birdsong and habitat characteristics, male quality, population density and ambient noise level in populations occupying urban and nonurban habitats.
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Affiliation(s)
- Krzysztof Deoniziak
- Department of Behavioural Ecology, Institute of Environmental Sciences, Faculty of Biology, Adam Mickiewicz University, Umultowska 89, 61-614, Poznań, Poland. .,Laboratory of Insect Evolutionary Biology and Ecology, Institute of Biology, University of Białystok, Ciołkowskiego 1J, 15-245, Białystok, Poland.
| | - Tomasz S Osiejuk
- Department of Behavioural Ecology, Institute of Environmental Sciences, Faculty of Biology, Adam Mickiewicz University, Umultowska 89, 61-614, Poznań, Poland
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Albrecht T, Opletalová K, Reif J, Janoušek V, Piálek L, Cramer ERA, Johnsen A, Reifová R. Sperm divergence in a passerine contact zone: Indication of reinforcement at the gametic level. Evolution 2019; 73:202-213. [DOI: 10.1111/evo.13677] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2018] [Accepted: 12/19/2018] [Indexed: 12/23/2022]
Affiliation(s)
- Tomáš Albrecht
- Faculty of Science, Department of ZoologyCharles University in Prague Praha 2 , CZ‐12844 Czech Republic
- Institute of Vertebrate Biology, v.v.i.The Czech Academy of Sciences Brno CZ‐60365 Czech Republic
| | - Kamila Opletalová
- Faculty of Science, Department of ZoologyCharles University in Prague Praha 2 , CZ‐12844 Czech Republic
| | - Jiří Reif
- Faculty of Science, Institute for Environmental StudiesCharles University in Prague Praha 2 CZ‐12100 Czech Republic
| | - Václav Janoušek
- Faculty of Science, Department of ZoologyCharles University in Prague Praha 2 , CZ‐12844 Czech Republic
| | - Lubomír Piálek
- Faculty of Science, Department of ZoologyUniversity of South Bohemia České Budějovice CZ‐370 05 Czech Republic
| | | | - Arild Johnsen
- Natural History MuseumUniversity of Oslo 0318 Oslo Norway
| | - Radka Reifová
- Faculty of Science, Department of ZoologyCharles University in Prague Praha 2 , CZ‐12844 Czech Republic
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Janoušek V, Fischerová J, Mořkovský L, Reif J, Antczak M, Albrecht T, Reifová R. Postcopulatory sexual selection reduces Z-linked genetic variation and might contribute to the large Z effect in passerine birds. Heredity (Edinb) 2018; 122:622-635. [PMID: 30374041 DOI: 10.1038/s41437-018-0161-3] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2018] [Revised: 09/20/2018] [Accepted: 10/12/2018] [Indexed: 12/19/2022] Open
Abstract
The X and Z sex chromosomes play a disproportionately large role in intrinsic postzygotic isolation. The underlying mechanisms of this large X/Z effect are, however, still poorly understood. Here we tested whether faster rates of molecular evolution caused by more intense positive selection or genetic drift on the Z chromosome could contribute to the large Z effect in two closely related passerine birds, the Common Nightingale (Luscinia megarhynchos) and the Thrush Nightingale (L. luscinia). We found that the two species differ in patterns of molecular evolution on the Z chromosome. The Z chromosome of L. megarhynchos showed lower levels of within-species polymorphism and an excess of non-synonymous polymorphisms relative to non-synonymous substitutions. This is consistent with increased levels of genetic drift on this chromosome and may be attributed to more intense postcopulatory sexual selection acting on L. megarhynchos males as was indicated by significantly longer sperm and higher between-male variation in sperm length in L. megarhynchos compared to L. luscinia. Interestingly, analysis of interspecific gene flow on the Z chromosome revealed relatively lower levels of introgression from L. megarhynchos to L. luscinia than vice versa, indicating that the Z chromosome of L. megarhynchos accumulated more hybrid incompatibilities. Our results are consistent with the view that postcopulatory sexual selection may reduce the effective population size of the Z chromosome and thus lead to stronger genetic drift on this chromosome in birds. This can result in relatively faster accumulation of hybrid incompatibilities on the Z and thus contribute to the large Z effect.
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Affiliation(s)
- Václav Janoušek
- Department of Zoology, Faculty of Science, Charles University, Viničná 7, Prague 2, 128 00, Czech Republic
| | - Jitka Fischerová
- Department of Zoology, Faculty of Science, Charles University, Viničná 7, Prague 2, 128 00, Czech Republic
| | - Libor Mořkovský
- Department of Zoology, Faculty of Science, Charles University, Viničná 7, Prague 2, 128 00, Czech Republic
| | - Jiří Reif
- Institute for Environmental Studies, Faculty of Science, Charles University, Benátská 2, Prague 2, 128 01, Czech Republic
| | - Marcin Antczak
- Department of Behavioural Ecology, Adam Mickiewicz University, Umultowska 89, Poznań, 61-614, Poland
| | - Tomáš Albrecht
- Department of Zoology, Faculty of Science, Charles University, Viničná 7, Prague 2, 128 00, Czech Republic.,Institute of Vertebrate Biology, The Czech Academy of Sciences, Květná 8, Brno, 603 65, Czech Republic
| | - Radka Reifová
- Department of Zoology, Faculty of Science, Charles University, Viničná 7, Prague 2, 128 00, Czech Republic.
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