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For: Zong W, Gao B, Diaby M, Shen D, Wang S, Wang Y, Sang Y, Chen C, Wang X, Song C. Traveler, a New DD35E Family of Tc1/Mariner Transposons, Invaded Vertebrates Very Recently. Genome Biol Evol 2021;12:66-76. [PMID: 32068835 PMCID: PMC7093834 DOI: 10.1093/gbe/evaa034] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 02/13/2020] [Indexed: 02/06/2023]  Open
Number Cited by Other Article(s)
1
Ben Amara W, Djebbi S, Khemakhem MM. Evolutionary History of the DD41D Family of Tc1/Mariner Transposons in Two Mayetiola Species. Biochem Genet 2024:10.1007/s10528-024-10898-z. [PMID: 39117934 DOI: 10.1007/s10528-024-10898-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2023] [Accepted: 07/29/2024] [Indexed: 08/10/2024]
2
Shi S, Puzakov MV, Puzakova LV, Ulupova YN, Xiang K, Wang B, Gao B, Song C. Hiker, a new family of DNA transposons encoding transposases with DD35E motifs, displays a distinct phylogenetic relationship with most known DNA transposon families of IS630-Tc1-mariner (ITm). Mol Phylogenet Evol 2023;188:107906. [PMID: 37586577 DOI: 10.1016/j.ympev.2023.107906] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2023] [Revised: 08/13/2023] [Accepted: 08/13/2023] [Indexed: 08/18/2023]
3
Puzakov MV, Puzakova LV, Shi S, Cheresiz SV. maT and mosquito transposons in cnidarians: evolutionary history and intraspecific differences. Funct Integr Genomics 2023;23:244. [PMID: 37454326 DOI: 10.1007/s10142-023-01175-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2023] [Revised: 07/07/2023] [Accepted: 07/10/2023] [Indexed: 07/18/2023]
4
Fan J, Yang S, Wennmann JT, Wang D, Jehle JA. The distribution and characteristic of two transposable elements in the genome of Cydia pomonella granulovirus and codling moth. Mol Phylogenet Evol 2023;182:107745. [PMID: 36842732 DOI: 10.1016/j.ympev.2023.107745] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2022] [Revised: 01/20/2023] [Accepted: 02/21/2023] [Indexed: 02/26/2023]
5
Horizontal Transfer and Evolutionary Profiles of Two Tc1/DD34E Transposons (ZB and SB) in Vertebrates. Genes (Basel) 2022;13:genes13122239. [PMID: 36553507 PMCID: PMC9777934 DOI: 10.3390/genes13122239] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2022] [Revised: 11/19/2022] [Accepted: 11/25/2022] [Indexed: 12/05/2022]  Open
6
Revisiting the Tigger Transposon Evolution Revealing Extensive Involvement in the Shaping of Mammal Genomes. BIOLOGY 2022;11:biology11060921. [PMID: 35741442 PMCID: PMC9219625 DOI: 10.3390/biology11060921] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/05/2022] [Revised: 06/08/2022] [Accepted: 06/14/2022] [Indexed: 11/17/2022]
7
Puzakov MV, Puzakova LV. Prevalence, Diversity, and Evolution of L18 (DD37E) Transposons in the Genomes of Cnidarians. Mol Biol 2022. [DOI: 10.1134/s0026893322030104] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
8
Puzakova LV, Puzakov MV. Zvezda—A New Subfamily of Tc1-Like Transposons in Asterozoa Genomes. RUSS J GENET+ 2022. [DOI: 10.1134/s1022795422010094] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
9
Zidi M, Denis F, Klai K, Chénais B, Caruso A, Djebbi S, Mezghani M, Casse N. Genome-wide characterization of Mariner-like transposons and their derived MITEs in the Whitefly Bemisia tabaci (Hemiptera: Aleyrodidae). G3 (BETHESDA, MD.) 2021;11:jkab287. [PMID: 34849769 PMCID: PMC8664452 DOI: 10.1093/g3journal/jkab287] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/19/2021] [Accepted: 07/28/2021] [Indexed: 12/02/2022]
10
Ben Amara W, Djebbi S, Ben Lazhar-Ajroud W, Naccache C, Mezghani MK. Insights on mauritiana-like Elements Diversity in Mayetiola destructor and M. hordei (Diptera: Cecidomyiidae). Genome 2021;65:165-181. [PMID: 34780303 DOI: 10.1139/gen-2021-0020] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
11
Prokaryotic and Eukaryotic Horizontal Transfer of Sailor (DD82E), a New Superfamily of IS630-Tc1-Mariner DNA Transposons. BIOLOGY 2021;10:biology10101005. [PMID: 34681104 PMCID: PMC8533490 DOI: 10.3390/biology10101005] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/30/2021] [Revised: 09/26/2021] [Accepted: 09/28/2021] [Indexed: 12/22/2022]
12
Liu Y, Zong W, Diaby M, Lin Z, Wang S, Gao B, Ji T, Song C. Diversity and Evolution of pogo and Tc1/mariner Transposons in the Apoidea Genomes. BIOLOGY 2021;10:940. [PMID: 34571816 PMCID: PMC8472432 DOI: 10.3390/biology10090940] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/10/2021] [Revised: 09/14/2021] [Accepted: 09/16/2021] [Indexed: 11/16/2022]
13
Wang Y, Shen D, Ullah N, Diaby M, Gao B, Song C. Characterization and expression pattern of ZB and PS transposons in zebrafish. Gene Expr Patterns 2021;42:119203. [PMID: 34481069 DOI: 10.1016/j.gep.2021.119203] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2021] [Revised: 08/25/2021] [Accepted: 08/28/2021] [Indexed: 11/28/2022]
14
Shen D, Gao B, Miskey C, Chen C, Sang Y, Zong W, Wang S, Wang Y, Wang X, Ivics Z, Song C. Multiple Invasions of Visitor, a DD41D Family of Tc1/mariner Transposons, throughout the Evolution of Vertebrates. Genome Biol Evol 2021;12:1060-1073. [PMID: 32602886 DOI: 10.1093/gbe/evaa135] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 06/23/2020] [Indexed: 12/13/2022]  Open
15
Puzakov MV, Puzakova LV, Cheresiz SV, Sang Y. The IS630/Tc1/mariner transposons in three ctenophore genomes. Mol Phylogenet Evol 2021;163:107231. [PMID: 34133948 DOI: 10.1016/j.ympev.2021.107231] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2021] [Revised: 05/31/2021] [Accepted: 06/11/2021] [Indexed: 10/21/2022]
16
Wang S, Diaby M, Puzakov M, Ullah N, Wang Y, Danley P, Chen C, Wang X, Gao B, Song C. Divergent evolution profiles of DD37D and DD39D families of Tc1/mariner transposons in eukaryotes. Mol Phylogenet Evol 2021;161:107143. [PMID: 33713798 DOI: 10.1016/j.ympev.2021.107143] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2020] [Revised: 02/28/2021] [Accepted: 03/04/2021] [Indexed: 11/29/2022]
17
Gao B, Zong W, Miskey C, Ullah N, Diaby M, Chen C, Wang X, Ivics Z, Song C. Intruder (DD38E), a recently evolved sibling family of DD34E/Tc1 transposons in animals. Mob DNA 2020;11:32. [PMID: 33303022 PMCID: PMC7731502 DOI: 10.1186/s13100-020-00227-7] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2020] [Accepted: 11/30/2020] [Indexed: 12/15/2022]  Open
18
Carducci F, Barucca M, Canapa A, Carotti E, Biscotti MA. Mobile Elements in Ray-Finned Fish Genomes. Life (Basel) 2020;10:E221. [PMID: 32992841 PMCID: PMC7599744 DOI: 10.3390/life10100221] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2020] [Revised: 09/18/2020] [Accepted: 09/22/2020] [Indexed: 12/12/2022]  Open
19
Gao B, Wang Y, Diaby M, Zong W, Shen D, Wang S, Chen C, Wang X, Song C. Evolution of pogo, a separate superfamily of IS630-Tc1-mariner transposons, revealing recurrent domestication events in vertebrates. Mob DNA 2020;11:25. [PMID: 32742312 PMCID: PMC7386202 DOI: 10.1186/s13100-020-00220-0] [Citation(s) in RCA: 31] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2020] [Accepted: 06/26/2020] [Indexed: 12/20/2022]  Open
20
Gao B, Sang Y, Zong W, Diaby M, Shen D, Wang S, Wang Y, Chen C, Song C. Evolution and domestication of Tc1/mariner transposons in the genome of African coelacanth (Latimeria chalumnae). Genome 2020;63:375-386. [PMID: 32268072 DOI: 10.1139/gen-2019-0216] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
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