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For: Zeng K, Charlesworth B, Hobolth A. Studying models of balancing selection using phase-type theory. Genetics 2021;218:6237896. [PMID: 33871627 DOI: 10.1093/genetics/iyab055] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2021] [Accepted: 03/25/2021] [Indexed: 11/15/2022]  Open
Number Cited by Other Article(s)
1
Wences AH, Peñaloza L, Steinrücken M, Siri-Jégousse A. The TMRCA of general genealogies in populations of variable size. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.09.19.613917. [PMID: 39386540 PMCID: PMC11463648 DOI: 10.1101/2024.09.19.613917] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 10/12/2024]
2
Braichenko S, Borges R, Kosiol C. Polymorphism-Aware Models in RevBayes: Species Trees, Disentangling Balancing Selection, and GC-Biased Gene Conversion. Mol Biol Evol 2024;41:msae138. [PMID: 38980178 PMCID: PMC11272101 DOI: 10.1093/molbev/msae138] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2023] [Revised: 04/19/2024] [Accepted: 07/06/2024] [Indexed: 07/10/2024]  Open
3
Hobolth A, Rivas-González I, Bladt M, Futschik A. Phase-type distributions in mathematical population genetics: An emerging framework. Theor Popul Biol 2024;157:14-32. [PMID: 38460602 DOI: 10.1016/j.tpb.2024.03.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2023] [Revised: 02/29/2024] [Accepted: 03/04/2024] [Indexed: 03/11/2024]
4
Berdan EL, Barton NH, Butlin R, Charlesworth B, Faria R, Fragata I, Gilbert KJ, Jay P, Kapun M, Lotterhos KE, Mérot C, Durmaz Mitchell E, Pascual M, Peichel CL, Rafajlović M, Westram AM, Schaeffer SW, Johannesson K, Flatt T. How chromosomal inversions reorient the evolutionary process. J Evol Biol 2023;36:1761-1782. [PMID: 37942504 DOI: 10.1111/jeb.14242] [Citation(s) in RCA: 12] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2023] [Revised: 09/13/2023] [Accepted: 10/05/2023] [Indexed: 11/10/2023]
5
Charlesworth B. The effects of inversion polymorphisms on patterns of neutral genetic diversity. Genetics 2023;224:iyad116. [PMID: 37348059 PMCID: PMC10411593 DOI: 10.1093/genetics/iyad116] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2023] [Revised: 02/23/2023] [Accepted: 06/11/2023] [Indexed: 06/24/2023]  Open
6
Kapun M, Mitchell ED, Kawecki TJ, Schmidt P, Flatt T. An Ancestral Balanced Inversion Polymorphism Confers Global Adaptation. Mol Biol Evol 2023;40:msad118. [PMID: 37220650 PMCID: PMC10234209 DOI: 10.1093/molbev/msad118] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2023] [Revised: 04/17/2023] [Accepted: 05/19/2023] [Indexed: 05/25/2023]  Open
7
Charlesworth B, Jensen JD. Some complexities in interpreting apparent effects of hitchhiking: A commentary on Gompert et al. (2022). Mol Ecol 2022;31:4440-4443. [PMID: 35778972 PMCID: PMC9536517 DOI: 10.1111/mec.16573] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2021] [Revised: 02/24/2022] [Accepted: 06/06/2022] [Indexed: 12/25/2022]
8
Paris JR, Whiting JR, Daniel MJ, Ferrer Obiol J, Parsons PJ, van der Zee MJ, Wheat CW, Hughes KA, Fraser BA. A large and diverse autosomal haplotype is associated with sex-linked colour polymorphism in the guppy. Nat Commun 2022;13:1233. [PMID: 35264556 PMCID: PMC8907176 DOI: 10.1038/s41467-022-28895-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2021] [Accepted: 02/16/2022] [Indexed: 11/22/2022]  Open
9
Friedlander E, Steinrücken M. A numerical framework for genetic hitchhiking in populations of variable size. Genetics 2022;220:6526396. [PMID: 35143667 PMCID: PMC8893261 DOI: 10.1093/genetics/iyac012] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2021] [Accepted: 12/27/2021] [Indexed: 11/13/2022]  Open
10
Johri P, Charlesworth B, Howell EK, Lynch M, Jensen JD. Revisiting the notion of deleterious sweeps. Genetics 2021;219:iyab094. [PMID: 34125884 PMCID: PMC9101445 DOI: 10.1093/genetics/iyab094] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2021] [Accepted: 06/08/2021] [Indexed: 11/14/2022]  Open
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