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Khairunisa BH, Heryakusuma C, Ike K, Mukhopadhyay B, Susanti D. Evolving understanding of rumen methanogen ecophysiology. Front Microbiol 2023; 14:1296008. [PMID: 38029083 PMCID: PMC10658910 DOI: 10.3389/fmicb.2023.1296008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2023] [Accepted: 10/12/2023] [Indexed: 12/01/2023] Open
Abstract
Production of methane by methanogenic archaea, or methanogens, in the rumen of ruminants is a thermodynamic necessity for microbial conversion of feed to volatile fatty acids, which are essential nutrients for the animals. On the other hand, methane is a greenhouse gas and its production causes energy loss for the animal. Accordingly, there are ongoing efforts toward developing effective strategies for mitigating methane emissions from ruminant livestock that require a detailed understanding of the diversity and ecophysiology of rumen methanogens. Rumen methanogens evolved from free-living autotrophic ancestors through genome streamlining involving gene loss and acquisition. The process yielded an oligotrophic lifestyle, and metabolically efficient and ecologically adapted descendants. This specialization poses serious challenges to the efforts of obtaining axenic cultures of rumen methanogens, and consequently, the information on their physiological properties remains in most part inferred from those of their non-rumen representatives. This review presents the current knowledge of rumen methanogens and their metabolic contributions to enteric methane production. It also identifies the respective critical gaps that need to be filled for aiding the efforts to mitigate methane emission from livestock operations and at the same time increasing the productivity in this critical agriculture sector.
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Affiliation(s)
| | - Christian Heryakusuma
- Genetics, Bioinformatics, and Computational Biology, Virginia Tech, Blacksburg, VA, United States
- Department of Biochemistry, Virginia Tech, Blacksburg, VA, United States
| | - Kelechi Ike
- Department of Biology, North Carolina Agricultural and Technical State University, Greensboro, NC, United States
| | - Biswarup Mukhopadhyay
- Genetics, Bioinformatics, and Computational Biology, Virginia Tech, Blacksburg, VA, United States
- Department of Biochemistry, Virginia Tech, Blacksburg, VA, United States
- Virginia Tech Carilion School of Medicine, Virginia Tech, Blacksburg, VA, United States
| | - Dwi Susanti
- Microbial Discovery Research, BiomEdit, Greenfield, IN, United States
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Vendramini JMB, Silveira ML, Moriel P. Resilience of warm-season (C 4) perennial grasses under challenging environmental and management conditions. Anim Front 2023; 13:16-22. [PMID: 37841762 PMCID: PMC10575312 DOI: 10.1093/af/vfad038] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2023] Open
Affiliation(s)
- Joao M B Vendramini
- Range Cattle Research and Education Center, University of Florida, Range Cattle Research and Education Center, Ona, FL 33865, USA
| | - Maria L Silveira
- Range Cattle Research and Education Center, University of Florida, Range Cattle Research and Education Center, Ona, FL 33865, USA
| | - Phillipe Moriel
- Range Cattle Research and Education Center, University of Florida, Range Cattle Research and Education Center, Ona, FL 33865, USA
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Jaramillo DM, Ruiz-Moreno M, Vendramini JMB, Sollenberger LE, DiLorenzo N, Queiroz LMD, Santos ERS, Garcia L, Abreu DS, Dubeux JCB. Methane emissions and 13C composition from beef steers consuming binary C3-C4 diets. J Anim Sci 2023; 101:skad181. [PMID: 37279326 PMCID: PMC10276642 DOI: 10.1093/jas/skad181] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2022] [Accepted: 06/02/2023] [Indexed: 06/08/2023] Open
Abstract
Improvements in forage nutritive value can reduce methane emission intensity in grazing ruminants. This study was designed to evaluate how the legume rhizoma peanut (Arachis glabrata; RP) inclusion into bahiagrass (Paspalum notatum) hay diets would affect intake and CH4 production in beef steers. We also assessed the potential to estimate the proportion of RP contribution to CH4 emissions using δ13C from enteric CH4. Twenty-five Angus-crossbred steers were randomly allocated to one of five treatments (five steers per treatment blocked by bodyweight): 1) 100% bahiagrass hay (0%RP); 2) 25% RP hay + 75% bahiagrass hay (25%RP); 3) 50% RP hay + 50% bahiagrass hay (50%RP); 4) 75% RP hay + 25% bahiagrass hay (75%RP); 5) 100% RP hay (100%RP). The study was laid out using a randomized complete block design, and the statistical model included fixed effect of treatment, and random effect of block. Methane emissions were collected using sulfur hexafluoride (SF6) technique, and apparent total tract digestibility was estimated utilizing indigestible neutral detergent fiber as an internal marker. A two-pool mixing model was used to predict diet source utilizing CH4 δ13C. Inclusion of RP did not affect intake or CH4 production (P > 0.05). Methane production per animal averaged 250 g CH4/d and 33 g CH4/kg dry matter intake, across treatments. The CH4 δ13C were -55.5, -60.3, -63.25, -63.35, and -68.7 for 0%RP, 25%RP, 50%RP, 75%RP, and 100%RP, respectively, falling within the reported ranges for C3 or C4 forage diets. Moreover, there was a quadratic effect (P = 0.04) on the CH4 δ13C, becoming more depleted (e.g., more negative) as the diet proportion of RP hay increased, appearing to plateau at 75%RP. Regression between predicted and observed proportions of RP in bahiagrass hay diets based on δ13C from CH4 indicate δ13C to be useful (Adj. R2 = 0.89) for predicting the contribution of RP in C3-C4 binary diets. Data from this study indicate that, while CH4 production may not always be reduced with legume inclusion into C4 hay diets, the δ13C technique is indeed useful for tracking the effect of dietary sources on CH4 emissions.
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Affiliation(s)
- David M Jaramillo
- Institute for Environmentally Integrated Dairy Management, USDA-ARS U.S. Dairy Forage Research Center, Marshfield, WI 54449, USA
| | - Martin Ruiz-Moreno
- Agronomy Department, North Florida Research and Education Center, University of Florida, Marianna, FL 32446, USA
| | - Joao M B Vendramini
- Agronomy Department, Range Cattle Research and Education Center, University of Florida, Ona, FL 33865, USA
| | | | - Nicolas DiLorenzo
- Department of Animal Sciences, North Florida Research and Education Center, University of Florida, Marianna, FL 32446, USA
| | - Luana M D Queiroz
- Agronomy Department, North Florida Research and Education Center, University of Florida, Marianna, FL 32446, USA
| | - Erick R S Santos
- Department of Agricultural, Food, and Nutritional Science, University of Alberta, Edmonton, AB, Canada T6G 2R3
| | - Liza Garcia
- Agronomy Department, North Florida Research and Education Center, University of Florida, Marianna, FL 32446, USA
| | - Daciele S Abreu
- Department of Animal Sciences, Federal University of Lavras, Lavras, MG 37200, Brazil
| | - Jose C B Dubeux
- Agronomy Department, North Florida Research and Education Center, University of Florida, Marianna, FL 32446, USA
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Stable isotopes provide evidence that condensed tannins from sericea lespedeza are degraded by ruminal microbes. Sci Rep 2022; 12:14318. [PMID: 35996007 PMCID: PMC9395352 DOI: 10.1038/s41598-022-18566-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2022] [Accepted: 08/16/2022] [Indexed: 01/20/2023] Open
Abstract
The objective of Trial 1 was to determine the effects of condensed tannins (CT) from sericea lespedeza [SL; Lespedeza cuneata (Dum. Cours.) G. Don] on in vitro digestible organic matter (IVDOM), total gas production (GP), methane (CH4) emission, and ruminal fluid parameters after fermentation. Substrates used in four 48-h in vitro fermentations were 100% bermudagrass [(Cynodon dactylon (L.) Pers.] hay (0SL), 100% SL hay (100SL), and a mix of both hays (50SL). Linear reductions were observed for all parameters (P < 0.05) with the inclusion of SL, except for CH4 in relation to GP, that presented a quadratic effect (P = 0.005). In Trial 2, SL plants were enriched with 13C-CO2 to obtain pure enriched CT to identify the destination of fermentation end products of CT degradation. The enrichment of CT through the SL was successful (P < 0.001), and carbon originated from CT was detected in the fermentation end products [microbial mass, clarified rumen fluid, and in the CH4 produced (P < 0.001)]. Therefore, inclusion of SL was effective in reducing in vitro CH4 production and compound-specific tracing of δ13C abundance provided better quantitative understanding of the mechanisms of partitioning CT during ruminal fermentation processes.
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O. S. van Cleef F, B. Dubeux JC, M. Ciriaco F, Henry DD, Ruiz-Moreno M, M. Jaramillo D, Garcia L, S. Santos ER, DiLorenzo N, B. Vendramini JM, Naumann HD, Sollenberger LE. Inclusion of a tannin-rich legume in the diet of beef steers reduces greenhouse gas emissions from their excreta. Sci Rep 2022; 12:14220. [PMID: 35987790 PMCID: PMC9392745 DOI: 10.1038/s41598-022-18523-y] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2022] [Accepted: 08/16/2022] [Indexed: 11/09/2022] Open
Abstract
The objectives of this study were to determine the emission of nitrous oxide (N2O), methane (CH4), and carbon dioxide (CO2), as well as the isotopic composition of N2O from excreta of beef steers fed ‘AU Grazer’ sericea lespedeza hay [SL; Lespedeza cuneata (Dum. Cours.) G. Don]. Fifteen Brahman × Angus crossbred steers were fed one of three experimental diets: 0, 50, or 100% inclusion of SL into ‘Tifton 85’ bermudagrass hay (Cynodon spp.). Gas sampling occurred on days 0, 1, 3, 5, 7, 14, 18, 25, and 32 after urine or feces application to static chambers for two experimental periods. Effect of the day after feces application (P < 0.001), while day × inclusion of SL interaction was observed in urine (P < 0.001) for all greenhouse gases (GHG) analyzed. Peaks of emission of all GHG in urine and feces occurred in the first days (P < 0.001), with days 3 and 5 being most depleted in 15N-N2O in feces, and days 3, 5, and 7, in urine (P < 0.001). Feeding SL to beef steers was effective in mitigating the emission of GHG from the excreta, but further research is necessary to investigate the mechanisms behind the reductions.
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Wang W, Patra AK, Puchala R, Ribeiro L, Gipson TA, Goetsch AL. Effects of Dietary Inclusion of Sericea Lespedeza Hay on Feed Intake, Digestion, Nutrient Utilization, Growth Performance, and Ruminal Fermentation and Methane Emission of Alpine Doelings and Katahdin Ewe Lambs. Animals (Basel) 2022; 12:ani12162064. [PMID: 36009655 PMCID: PMC9405022 DOI: 10.3390/ani12162064] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2022] [Revised: 08/05/2022] [Accepted: 08/10/2022] [Indexed: 11/16/2022] Open
Abstract
Twenty-four Alpine doelings, initial 25.3 ± 0.55 kg body weight (BW) and 10.4 ± 0.11 mo of age, and 24 Katahdin ewe lambs, 28.3 ± 1.02 kg BW and 9.6 ± 0.04 mo of age, were used to determine effects of dietary inclusion of Sericea lespedeza (Lespedeza cuneata) hay on feed intake, digestion, growth performance, energy metabolism, and ruminal fermentation and methane emission. There were four periods, the first three 42 days in length and the fourth 47 days. Diets consumed ad libitum contained 75% coarsely ground hay with alfalfa (ALF), a 1:1 mixture of ALF and LES (ALF+LES), and LES (10.0% condensed tannins; CT). The intake of dry matter (DM) tended to be greater (p = 0.063) for Katahdin than for Alpine (4.14 vs. 3.84% BW; SEM = 0.110). The dry matter intake was similar among the diets (3.97, 4.10, and 3.89% BW for ALF, ALF+LES, and LES, respectively; SEM = 0.134). The digestion of organic matter (75.3, 69.3, and 65.5%; SEM = 0.86), neutral detergent fiber (61.7, 50.5, and 41.4%; SEM = 1.49), and nitrogen (78.8, 66.9, and 50.8% for ALF, ALF+LES, and LES, respectively; SEM = 0.92) decreased as the dietary concentration of lespedeza increased (p < 0.05). However, there was an interaction (p < 0.05) between the breed and diet in nitrogen digestion, with a greater value for goats vs. sheep with LES (54.4 vs. 47.3%; SEM = 1.30). The digested nitrogen intake decreased markedly with the increasing quantity of lespedeza (38.0, 27.5, and 15.7 g/day for ALF, ALF+LES, and LES, respectively; SEM = 1.26). The average daily gain was greater for Katahdin than for Alpine (p < 0.001; 180 vs. 88 g, SEM = 5.0) and ranked (p < 0.05) ALF > ALF+LES > LES (159, 132, and 111 g, respectively; SEM = 6.1). The ruminal methane emission differed (p < 0.05) between animal types in MJ/day (1.17 and 1.44), kJ/g DM intake (1.39 and 1.23), and kJ/g ADG (18.1 and 9.8 for Alpine and Katahdin, respectively). Regardless of the period and animal type, diet did not impact methane emission in MJ/day or relative to DM intake, BW, or ADG (p > 0.05). The digestible and metabolizable energy intakes, heat production, and retained energy were not affected by diet (p > 0.05). In conclusion, future research should consider the marked potential effect of CT of forages such as lespedeza on nitrogen digestion and associated effects on protein status and other conditions that may be impacted.
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Affiliation(s)
- Wei Wang
- College of Animal Science and Veterinary Medicine, Shenyang Agricultural University, Shenyang 110866, China
- American Institute for Goat Research, Langston University, Langston, OK 73050, USA
| | - Amlan Kumar Patra
- Department of Animal Nutrition, West Bengal University of Animal and Fishery Sciences, Kolkata 700037, India
| | - Ryszard Puchala
- American Institute for Goat Research, Langston University, Langston, OK 73050, USA
| | - Luana Ribeiro
- American Institute for Goat Research, Langston University, Langston, OK 73050, USA
| | - Terry Allen Gipson
- American Institute for Goat Research, Langston University, Langston, OK 73050, USA
| | - Arthur Louis Goetsch
- American Institute for Goat Research, Langston University, Langston, OK 73050, USA
- Correspondence:
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