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Volleth M, Greilhuber J, Heller KG, Müller S, Yong HS, Loidl J. Increased genome size is caused by heterochromatin addition in two non-related bat species, Hesperoptenus doriae and Philetor brachypterus (Vespertilionidae, Chiroptera, Mammalia). Chromosoma 2023; 132:269-288. [PMID: 37322170 DOI: 10.1007/s00412-023-00802-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2023] [Revised: 05/19/2023] [Accepted: 06/05/2023] [Indexed: 06/17/2023]
Abstract
The average genome size (GS) of bats, which are the only mammals capable of powered flight, is approximately 18% smaller than that of closely related mammalian orders. The low nuclear DNA content of Chiroptera is comparable to that of birds, which are also characterized by a high metabolic rate. Only a few chiropteran taxa possess notable amounts of constitutive heterochromatin. Here, we studied the karyotypes of two non-related vesper bat species with unusually high amounts of constitutive heterochromatin: Hesperoptenus doriae and Philetor brachypterus. Conventional staining methods and whole-chromosome painting with probes derived from Myotis myotis (2n = 44), showing a karyotype close to that of the presumed ancestor of Vespertilionidae, revealed Robertsonian fusions as the main type of rearrangement leading to the exceptionally reduced diploid chromosome number of 2n = 26 in both species. Moreover, both karyotypes are characterized by large blocks of pericentromeric heterochromatin composed of CMA-positive and DA-DAPI-positive segments. In H. doriae, the heterochromatin accumulation has resulted in a genome size of 3.22 pg (1C), which is 40% greater than the mean genome size for the family. For P. brachypterus, a genome size of 2.94 pg was determined, representing an increase of about 28%. Most notably, in H. doriae, the presence of additional constitutive heterochromatin correlates with an extended mitotic cell cycle duration in vitro. A reduction in diploid chromosome number to 30 or lower is discussed as a possible cause of the accumulation of pericentromeric heterochromatin in Vespertilionidae.
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Affiliation(s)
- Marianne Volleth
- Department of Human Genetics, Otto-Von-Guericke University, Leipzigerstr. 44, 39120, Magdeburg, Germany.
- Triesdorf, Bahnhof 8, 91732, Merkendorf, Germany.
| | - Johann Greilhuber
- Department of Systematic and Evolutionary Botany, University of Vienna, Rennweg 14, 1030, Vienna, Austria
| | | | - Stefan Müller
- Institute of Human Genetics, Munich University Hospital, Ludwig-Maximilian University, Goethestr. 29, 80336, Munich, Germany
| | - Hoi-Sen Yong
- Institute of Biological Sciences, University of Malaya, 50603, Kuala Lumpur, Malaysia
| | - Josef Loidl
- Department of Chromosome Biology, Max Perutz Laboratories, University of Vienna, Dr.-Bohr-Gasse 9, 1030, Vienna, Austria
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Kusuminda T, Mannakkara A, Ukuwela KDB, Kruskop SV, Amarasinghe CJ, Saikia U, Venugopal P, Karunarathna M, Gamage R, Ruedi M, Csorba G, Yapa WB, Patterson BD. DNA Barcoding and Morphological Analyses Reveal a Cryptic Species of Miniopterus from India and Sri Lanka. ACTA CHIROPTEROLOGICA 2022. [DOI: 10.3161/15081109acc2022.24.1.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Affiliation(s)
- Tharaka Kusuminda
- Department of Agricultural Biology, Faculty of Agriculture, University of Ruhuna, Kamburupitiya, Sri Lanka
| | - Amani Mannakkara
- Department of Agricultural Biology, Faculty of Agriculture, University of Ruhuna, Kamburupitiya, Sri Lanka
| | - Kanishka D. B. Ukuwela
- Department of Biological Sciences, Faculty of Applied Sciences, Rajarata University of Sri Lanka, Mihintale, Sri Lanka
| | - Sergei V. Kruskop
- Zoological Museum of M.V. Lomonosov Moscow State University, Ul. Bol'shata Nikitskaya, 2, Moscow 125009, Russia
| | | | - Uttam Saikia
- Zoological Survey of India, North Eastern Regional Centre, Risa Colony, Shillong 793003, Meghalaya, India
| | - Parvathy Venugopal
- Bat Conservation Trust, London, 8 Battersea Park Road, London SW8 4BG, UK
| | | | | | - Manuel Ruedi
- Department of Vertebrates, Natural History Museum of Geneva, Route de Malagnou 1, 1208 Geneva, Switzerland
| | - Gábor Csorba
- Department of Zoology, Hungarian Natural History Museum, Baross utca 13, Budapest, H-1088, Hungary
| | - Wipula B. Yapa
- Department of Zoology and Environment Sciences, Faculty of Science, University of Colombo, Sri Lanka
| | - Bruce D. Patterson
- Negaunee Integrative Research Center, Field Museum of Natural History, Chicago, Illinois, USA
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Furey NM, Tu VT, Hitch AT, Pimsai A, Kimashalen C, Vuthy B, Raksmey Y, Sarak C, Borthwick SA, Ch'ng L, Sinly S, Csorba G, Saveng I, Smith GJD, Dany C, Mendenhall IH. First Records of Seemingly Rare Bats (Mammalia: Chiroptera) in Cambodia, with a Revised Checklist of Species for the Country. ACTA CHIROPTEROLOGICA 2022. [DOI: 10.3161/15081109acc2021.23.2.005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Affiliation(s)
- Neil M. Furey
- Fauna & Flora International (Cambodia), PO Box 1380, No. 19, Street 360, Boeng Keng Kong 1, Phnom Penh, 12000, Cambodia
| | - Vuong T. Tu
- Institute of Ecology and Biological Resources, Vietnam Academy of Science and Technology, No. 18, Hoang Quoc Viet Road, Cau Giay District, Hanoi, Vietnam
| | - Alan T. Hitch
- Museum of Wildlife and Fish Biology, Department of Wildlife, Fish, and Conservation Biology, University of California at Davis, Davis, CA 95616, USA
| | - Awatsaya Pimsai
- Harrison Institute, Bowerwood House, 15 St Botolph's Road, Sevenoaks, Kent, TN13 3AQ, United Kingdom
| | - Chor Kimashalen
- Forestry Administration, No. 40, Preah Norodom Boulevard (41), Phnom Penh, Cambodia
| | - Buor Vuthy
- Forestry Administration, No. 40, Preah Norodom Boulevard (41), Phnom Penh, Cambodia
| | - Yim Raksmey
- Centre for Biodiversity Conservation, Room 415, Department of Biology, Faculty of Science, Royal University of Phnom Penh, Confederation of Russia Boulevard, Phnom Penh, Cambodia
| | - Chheang Sarak
- Centre for Biodiversity Conservation, Room 415, Department of Biology, Faculty of Science, Royal University of Phnom Penh, Confederation of Russia Boulevard, Phnom Penh, Cambodia
| | - Sophie A. Borthwick
- Programme in Emerging Infectious Diseases, Duke-NUS Medical School, 8 College Road, 169857, Singapore
| | - Lena Ch'ng
- Programme in Emerging Infectious Diseases, Duke-NUS Medical School, 8 College Road, 169857, Singapore
| | - Say Sinly
- Forestry Administration, No. 40, Preah Norodom Boulevard (41), Phnom Penh, Cambodia
| | - Gábor Csorba
- Department of Zoology, Hungarian Natural History Museum, Baross u. 13, H-1088 Budapest, Hungary
| | - Ith Saveng
- Centre for Biodiversity Conservation, Room 415, Department of Biology, Faculty of Science, Royal University of Phnom Penh, Confederation of Russia Boulevard, Phnom Penh, Cambodia
| | - Gavin J. D. Smith
- Programme in Emerging Infectious Diseases, Duke-NUS Medical School, 8 College Road, 169857, Singapore
| | - Chheang Dany
- Forestry Administration, No. 40, Preah Norodom Boulevard (41), Phnom Penh, Cambodia
| | - Ian H. Mendenhall
- Programme in Emerging Infectious Diseases, Duke-NUS Medical School, 8 College Road, 169857, Singapore
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Nguyen ST, O'Shea TJ, Gore JA, Nguyen KV, Hoang TT, Motokawa M, Dang PH, Le MD, Nguyen TT, Oshida T, Endo H, Tran TA, Bui HT, Ly TN, Vu DT, Chu HT, Vuong TT. Bats (Chiroptera) of Bidoup Nui Ba National Park, Dalat Plateau, Vietnam. MAMMAL STUDY 2021. [DOI: 10.3106/ms2020-0024] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Affiliation(s)
- Son Truong Nguyen
- Department of Vertebrate Zoology and Me Linh station for Biodiversity, Institute of Ecology and Biological Resources, Vietnam Academy of Sciences and Technology, 18 Hoang Quoc Viet Road, Hanoi, Vietnam
| | - Thomas J. O'Shea
- Wildlife At Risk, 46/68 Nguyen Van Dau, Ward 6, Binh Thanh District, Ho Chi Minh City, Vietnam
| | - Jeffery A. Gore
- Wildlife At Risk, 46/68 Nguyen Van Dau, Ward 6, Binh Thanh District, Ho Chi Minh City, Vietnam
| | - Khoi Vu Nguyen
- Wildlife At Risk, 46/68 Nguyen Van Dau, Ward 6, Binh Thanh District, Ho Chi Minh City, Vietnam
| | - Thanh Trung Hoang
- University of Science, Vietnam National University, Hanoi, 334 Nguyen Trai Street, Thanh Xuan District, Hanoi, Vietnam
| | - Masaharu Motokawa
- The Kyoto University Museum, Kyoto University, Kyoto 606-8501, Japan
| | - Phuong Huy Dang
- Department of Vertebrate Zoology and Me Linh station for Biodiversity, Institute of Ecology and Biological Resources, Vietnam Academy of Sciences and Technology, 18 Hoang Quoc Viet Road, Hanoi, Vietnam
| | - Minh Duc Le
- University of Science, Vietnam National University, Hanoi, 334 Nguyen Trai Street, Thanh Xuan District, Hanoi, Vietnam
| | - Tham Thi Nguyen
- University of Science, Vietnam National University, Hanoi, 334 Nguyen Trai Street, Thanh Xuan District, Hanoi, Vietnam
| | - Tatsuo Oshida
- Laboratory of Wildlife Biology, Obihiro University of Agriculture and Veterinary Medicine, Obihiro 080-8555, Japan
| | - Hideki Endo
- The University Museum, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-003, Japan
| | - Tuan Anh Tran
- Department of Vertebrate Zoology and Me Linh station for Biodiversity, Institute of Ecology and Biological Resources, Vietnam Academy of Sciences and Technology, 18 Hoang Quoc Viet Road, Hanoi, Vietnam
| | - Hai Tuan Bui
- Graduate University of Sciences and Technology, Vietnam Academy of Science and Technology, 18 Hoang Quoc Viet Str., Hanoi, Vietnam
| | - Tu Ngoc Ly
- Department of Vertebrate Zoology and Me Linh station for Biodiversity, Institute of Ecology and Biological Resources, Vietnam Academy of Sciences and Technology, 18 Hoang Quoc Viet Road, Hanoi, Vietnam
| | - Duong Thuy Vu
- Department of Vertebrate Zoology and Me Linh station for Biodiversity, Institute of Ecology and Biological Resources, Vietnam Academy of Sciences and Technology, 18 Hoang Quoc Viet Road, Hanoi, Vietnam
| | - Hang Thi Chu
- Department of Vertebrate Zoology and Me Linh station for Biodiversity, Institute of Ecology and Biological Resources, Vietnam Academy of Sciences and Technology, 18 Hoang Quoc Viet Road, Hanoi, Vietnam
| | - Tu Tan Vuong
- Department of Vertebrate Zoology and Me Linh station for Biodiversity, Institute of Ecology and Biological Resources, Vietnam Academy of Sciences and Technology, 18 Hoang Quoc Viet Road, Hanoi, Vietnam
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Görföl T, Kruskop SV, Tu VT, Estók P, Son NT, Csorba G. A new genus of vespertilionid bat: the end of a long journey for Joffre's Pipistrelle (Chiroptera: Vespertilionidae). J Mammal 2020; 101:331-348. [PMID: 32454533 PMCID: PMC7236909 DOI: 10.1093/jmammal/gyz202] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2019] [Accepted: 11/21/2019] [Indexed: 11/12/2022] Open
Abstract
Knowledge as to the taxonomic status of enigmatic bat species often is hindered by limited availability of specimens. This is particularly true for aerial-hawking bats that are difficult to catch. One such species, "Hypsugo" joffrei, was originally described in Nyctalus due to its long and slender wings, but subsequently transferred to Pipistrellus, and most recently to Hypsugo, on the basis of morphology. Analysis of newly available material, which more than doubles the known specimens of this taxon, demonstrates that it is morphologically and genetically distinct from all other bat genera. We accordingly describe it as belonging to a new, monotypic genus. We provide a detailed description of its external and craniodental traits, measurements, and assessment of genetic relationships, including barcode sequences to facilitate its rapid identification in future. The new genus belongs to a group that includes the recently described Cassistrellus, as well as Tylonycteris, and its closest relative, Philetor. We also describe the echolocation calls emitted by members of the taxon in different situations, which may facilitate finding them in previously unsampled locations. Based on the new data, the species occurs from Nepal to North Vietnam and China, which suggests that it could be more widespread than previously thought.
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Affiliation(s)
- Tamás Görföl
- Department of Zoology, Hungarian Natural History Museum, Budapest, Hungary
| | | | - Vuong Tan Tu
- Institute of Ecology and Biological Resources, Vietnam Academy of Science and Technology, Hanoi, Vietnam.,Graduate University of Science and Technology, Vietnam Academy of Science and Technology, Hanoi, Vietnam
| | - Péter Estók
- Department of Zoology, Eszterházy Károly University, Eger, Hungary
| | - Nguyen Truong Son
- Institute of Ecology and Biological Resources, Vietnam Academy of Science and Technology, Hanoi, Vietnam.,Graduate University of Science and Technology, Vietnam Academy of Science and Technology, Hanoi, Vietnam
| | - Gábor Csorba
- Department of Zoology, Hungarian Natural History Museum, Budapest, Hungary
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Ruedas LA. Editor’s choice. J Mammal 2020. [DOI: 10.1093/jmammal/gyaa026] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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Unusual Pipistrelle: Taxonomic Position of the Malayan Noctule ( Pipistrellus stenopterus; Vespertilionidae; Chiroptera). Zool Stud 2020; 57:e60. [PMID: 31966300 DOI: 10.6620/zs.2018.57-60] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2018] [Accepted: 11/20/2018] [Indexed: 11/18/2022]
Abstract
Sergei V. Kruskop, Evgeniya N. Solovyeva, and Anna D. Kaznadzey (2018) Despite huge progress in the systematics of bats and, in particular, of the Vespertilionidae family in latest years, the taxonomic position of a number of remarkable bat species has been uncertain until now, partly because of limits in acceptable comparative material. Researchers have previously placed the Malayan noctule, Pipistrellus stenopterus, into Nyctalus, because of similar body shape and proportions, or into Pipistrellus, based on karyological analysis. This study reassesses Pipistrellus stenopterus using available collection material and compares it to various members of Nyctalus and Pipistrellus, as well as with some other related and similar genera, based on respective morphological and molecular genetic features. This species demonstrates vast morphological peculiarities compared to other Pipistrellus-like bats. Nonetheless, both mitochondrial and nuclear genetic markers unequivocally place it close to other Asian pipistrelles, most probably in a sister position to the "javanicus" species group. We propose establishing P. stenopterus as a separate subgenus, Alionoctula. Our results also confirm that Pipistrellus is paraphyletic in its current state, and we suggest that further studies explore its internal taxonomy and limits.
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Görföl T, Furey NM, Bates PJJ, Csorba G. The Identity of ‘Falsistrellus’ affinis from Myanmar and Cambodia and New Records of Hypsugo dolichodon from these Countries. ACTA CHIROPTEROLOGICA 2019. [DOI: 10.3161/15081109acc2018.20.2.002] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Affiliation(s)
- Tamás Görföl
- Department of Zoology, Hungarian Natural History Museum, Baross utca 13, Budapest, H-1088 Hungary
| | - Neil M. Furey
- c/o Fauna & Flora International, No. 19, Street 360, Sangkat Boeung Keng Kang 1, Khan Chamkarmon, Phnom Penh, Cambodia
| | - Paul J. J. Bates
- Harrison Institute, Bowerwood House, 15 St. Botolph's Road, Sevenoaks, Kent, TN13 3AQ, United Kingdom
| | - Gábor Csorba
- Department of Zoology, Hungarian Natural History Museum, Baross utca 13, Budapest, H-1088 Hungary
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Görföl T, Csorba G. Integrative taxonomy places Asian species of Falsistrellus (Chiroptera: Vespertilionidae) into Hypsugo. Mamm Biol 2018. [DOI: 10.1016/j.mambio.2018.08.004] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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Abstract
Conservation biology aims to identify species most at risk of extinction and to understand factors that forecast species vulnerability. The International Union for Conservation of Nature (IUCN) Red List is a leading source for extinction risk data of species globally, however, many potentially at risk species are not assessed by the IUCN owing to inadequate data. Of the approximately 1150 bat species (Chiroptera) recognized by the IUCN, 17 percent are categorized as Data Deficient. Here, we show that large trait databases in combination with a comprehensive phylogeny can identify which traits are important for assessing extinction risk in bats. Using phylogenetic logistic regressions, we show that geographic range and island endemism are the strongest correlates of binary extinction risk. We also show that simulations using two models that trade-off between data complexity and data coverage provide similar estimates of extinction risk for species that have received a Red List assessment. We then use our model parameters to provide quantitative predictions of extinction risk for 60 species that have not received risk assessments by the IUCN. Our model suggests that at least 20 bat species should be treated as threatened by extinction. In combination with expert knowledge, our results can be used as a quick, first-pass prioritization for conservation action.
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