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Manjarrez LF, Guevara MÁ, de María N, Vélez MD, Cobo-Simón I, López-Hinojosa M, Cabezas JA, Mancha JA, Pizarro A, Díaz-Sala MC, Cervera MT. Maritime Pine Rootstock Genotype Modulates Gene Expression Associated with Stress Tolerance in Grafted Stems. PLANTS (BASEL, SWITZERLAND) 2024; 13:1644. [PMID: 38931075 PMCID: PMC11207801 DOI: 10.3390/plants13121644] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/17/2024] [Revised: 06/06/2024] [Accepted: 06/07/2024] [Indexed: 06/28/2024]
Abstract
Climate change-induced hazards, such as drought, threaten forest resilience, particularly in vulnerable regions such as the Mediterranean Basin. Maritime pine (Pinus pinaster Aiton), a model species in Western Europe, plays a crucial role in the Mediterranean forest due to its genetic diversity and ecological plasticity. This study characterizes transcriptional profiles of scion and rootstock stems of four P. pinaster graft combinations grown under well-watered conditions. Our grafting scheme combined drought-sensitive and drought-tolerant genotypes for scions (GAL1056: drought-sensitive scion; and Oria6: drought-tolerant scion) and rootstocks (R1S: drought-sensitive rootstock; and R18T: drought-tolerant rootstock). Transcriptomic analysis revealed expression patterns shaped by genotype provenance and graft combination. The accumulation of differentially expressed genes (DEGs) encoding proteins, involved in defense mechanisms and pathogen recognition, was higher in drought-sensitive scion stems and also increased when grafted onto drought-sensitive rootstocks. DEGs involved in drought tolerance mechanisms were identified in drought-tolerant genotypes as well as in drought-sensitive scions grafted onto drought-tolerant rootstocks, suggesting their establishment prior to drought. These mechanisms were associated with ABA metabolism and signaling. They were also involved in the activation of the ROS-scavenging pathways, which included the regulation of flavonoid and terpenoid metabolisms. Our results reveal DEGs potentially associated with the conifer response to drought and point out differences in drought tolerance strategies. These findings suggest genetic trade-offs between pine growth and defense, which could be relevant in selecting more drought-tolerant Pinus pinaster trees.
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Affiliation(s)
- Lorenzo Federico Manjarrez
- Departamento de Ecología y Genética Forestal, Instituto de Ciencias Forestal (ICIFOR), Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria—Consejo Superior de Investigaciones Científicas (INIA–CSIC), 28040 Madrid, Spain; (L.F.M.); (N.d.M.); (M.D.V.); (I.C.-S.); (M.L.-H.); (J.A.C.); (J.A.M.)
| | - María Ángeles Guevara
- Departamento de Ecología y Genética Forestal, Instituto de Ciencias Forestal (ICIFOR), Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria—Consejo Superior de Investigaciones Científicas (INIA–CSIC), 28040 Madrid, Spain; (L.F.M.); (N.d.M.); (M.D.V.); (I.C.-S.); (M.L.-H.); (J.A.C.); (J.A.M.)
| | - Nuria de María
- Departamento de Ecología y Genética Forestal, Instituto de Ciencias Forestal (ICIFOR), Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria—Consejo Superior de Investigaciones Científicas (INIA–CSIC), 28040 Madrid, Spain; (L.F.M.); (N.d.M.); (M.D.V.); (I.C.-S.); (M.L.-H.); (J.A.C.); (J.A.M.)
| | - María Dolores Vélez
- Departamento de Ecología y Genética Forestal, Instituto de Ciencias Forestal (ICIFOR), Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria—Consejo Superior de Investigaciones Científicas (INIA–CSIC), 28040 Madrid, Spain; (L.F.M.); (N.d.M.); (M.D.V.); (I.C.-S.); (M.L.-H.); (J.A.C.); (J.A.M.)
| | - Irene Cobo-Simón
- Departamento de Ecología y Genética Forestal, Instituto de Ciencias Forestal (ICIFOR), Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria—Consejo Superior de Investigaciones Científicas (INIA–CSIC), 28040 Madrid, Spain; (L.F.M.); (N.d.M.); (M.D.V.); (I.C.-S.); (M.L.-H.); (J.A.C.); (J.A.M.)
| | - Miriam López-Hinojosa
- Departamento de Ecología y Genética Forestal, Instituto de Ciencias Forestal (ICIFOR), Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria—Consejo Superior de Investigaciones Científicas (INIA–CSIC), 28040 Madrid, Spain; (L.F.M.); (N.d.M.); (M.D.V.); (I.C.-S.); (M.L.-H.); (J.A.C.); (J.A.M.)
| | - José Antonio Cabezas
- Departamento de Ecología y Genética Forestal, Instituto de Ciencias Forestal (ICIFOR), Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria—Consejo Superior de Investigaciones Científicas (INIA–CSIC), 28040 Madrid, Spain; (L.F.M.); (N.d.M.); (M.D.V.); (I.C.-S.); (M.L.-H.); (J.A.C.); (J.A.M.)
| | - José Antonio Mancha
- Departamento de Ecología y Genética Forestal, Instituto de Ciencias Forestal (ICIFOR), Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria—Consejo Superior de Investigaciones Científicas (INIA–CSIC), 28040 Madrid, Spain; (L.F.M.); (N.d.M.); (M.D.V.); (I.C.-S.); (M.L.-H.); (J.A.C.); (J.A.M.)
| | - Alberto Pizarro
- Departamento de Ciencias de la Vida, Universidad de Alcalá (UAH), 28805 Alcalá de Henares, Spain; (A.P.); (M.C.D.-S.)
| | - María Carmen Díaz-Sala
- Departamento de Ciencias de la Vida, Universidad de Alcalá (UAH), 28805 Alcalá de Henares, Spain; (A.P.); (M.C.D.-S.)
| | - María Teresa Cervera
- Departamento de Ecología y Genética Forestal, Instituto de Ciencias Forestal (ICIFOR), Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria—Consejo Superior de Investigaciones Científicas (INIA–CSIC), 28040 Madrid, Spain; (L.F.M.); (N.d.M.); (M.D.V.); (I.C.-S.); (M.L.-H.); (J.A.C.); (J.A.M.)
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Ishii H, Ishikawa A, Yumoto E, Kurokura T, Asahina M, Shimada Y, Nakamura A. Propiconazole-induced brassinosteroid deficiency reduces female fertility by inhibiting female gametophyte development in woodland strawberry. PLANT CELL REPORTS 2023; 42:587-598. [PMID: 36629883 DOI: 10.1007/s00299-023-02981-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/25/2022] [Accepted: 01/05/2023] [Indexed: 06/17/2023]
Abstract
In woodland strawberry, a brassinosteroid biosynthesis inhibitor propiconazole induced typical brassinosteroid-deficient phenotypes and decreased female fertility due to attenuated female gametophyte development. Brassinosteroids (BRs) play roles in various aspects of plant development. We investigated the physiological roles of BRs in the woodland strawberry, Fragaria vesca. BR-level-dependent phenotypes were observed using a BR biosynthetic inhibitor, propiconazole (PCZ), and the most active natural BR, brassinolide (BL). Endogenous BL and castasterone, the active BRs, were below detectable levels in PCZ-treated woodland strawberry. The plants were typical BR-deficient phenotypes, and all phenotypes were restored by treatment with BL. These observations indicate that PCZ is an effective inhibitor of BR in woodland strawberry. Only one gene for each major step of BR biosynthesis in Arabidopsis is encoded in the woodland strawberry genome. BR biosynthetic genes are highly expressed during the early stage of fruit development. Emasculated flowers treated with BL failed to develop fruit, implying that BR is not involved in parthenocarpic fruit development. Similar to BR-deficient and BR-insensitive Arabidopsis mutants, female fertility was lower in PCZ-treated plants than in mock-treated plants due to failed attraction of the pollen tube to the ovule. In PCZ-treated plants, expression of FveMYB98, the homologous gene for Arabidopsis MYB98 (a marker for synergid cells), was downregulated. Ovules were smaller in PCZ-treated plants than in mock-treated plants, and histological analysis implied that the development of more than half of female gametophytes was arrested at the early stage in PCZ-treated plants. Our findings explain how BRs function during female gametophyte development in woodland strawberry.
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Affiliation(s)
- Hikari Ishii
- Yokohama City University, Kihara Institute for Biological Research, Maioka 641-12, Totsuka, Yokohama, Kanagawa, 244-0813, Japan
| | - Ami Ishikawa
- Yokohama City University, Kihara Institute for Biological Research, Maioka 641-12, Totsuka, Yokohama, Kanagawa, 244-0813, Japan
| | - Emi Yumoto
- Advanced Instrumental Analysis Center, Teikyo University, 1-1 Toyosatodai, Utsunomiya, Tochigi, 321-8505, Japan
| | - Takeshi Kurokura
- Faculty of Agriculture, Utsunomiya University, 350 Mine, Utsunomiya, Tochigi, 321-8505, Japan
| | - Masashi Asahina
- Advanced Instrumental Analysis Center, Teikyo University, 1-1 Toyosatodai, Utsunomiya, Tochigi, 321-8505, Japan
- Department of Biosciences, Teikyo University, 1-1 Toyosatodai, Utsunomiya, Tochigi, 320-8551, Japan
| | - Yukihisa Shimada
- Yokohama City University, Kihara Institute for Biological Research, Maioka 641-12, Totsuka, Yokohama, Kanagawa, 244-0813, Japan
| | - Ayako Nakamura
- Yokohama City University, Kihara Institute for Biological Research, Maioka 641-12, Totsuka, Yokohama, Kanagawa, 244-0813, Japan.
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Wei Q, Liu J, Guo F, Wang Z, Zhang X, Yuan L, Ali K, Qiang F, Wen Y, Li W, Zheng B, Bai Q, Li G, Ren H, Wu G. Kinase regulators evolved into two families by gain and loss of ability to bind plant steroid receptors. PLANT PHYSIOLOGY 2023; 191:1167-1185. [PMID: 36494097 PMCID: PMC9922406 DOI: 10.1093/plphys/kiac568] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/16/2022] [Accepted: 11/29/2022] [Indexed: 06/17/2023]
Abstract
All biological functions evolve by fixing beneficial mutations and removing deleterious ones. Therefore, continuously fixing and removing the same essential function to separately diverge monophyletic gene families sounds improbable. Yet, here we report that brassinosteroid insensitive1 kinase inhibitor1 (BKI1)/membrane-associated kinase regulators (MAKRs) regulating a diverse function evolved into BKI1 and MAKR families from a common ancestor by respectively enhancing and losing ability to bind brassinosteroid receptor brassinosteroid insensitive1 (BRI1). The BKI1 family includes BKI1, MAKR1/BKI1-like (BKL) 1, and BKL2, while the MAKR family contains MAKR2-6. Seedless plants contain only BKL2. In seed plants, MAKR1/BKL1 and MAKR3, duplicates of BKL2, gained and lost the ability to bind BRI1, respectively. In angiosperms, BKL2 lost the ability to bind BRI1 to generate MAKR2, while BKI1 and MAKR6 were duplicates of MAKR1/BKL1 and MAKR3, respectively. In dicots, MAKR4 and MAKR5 were duplicates of MAKR3 and MAKR2, respectively. Importantly, BKI1 localized in the plasma membrane, but BKL2 localized to the nuclei while MAKR1/BKL1 localized throughout the whole cell. Importantly, BKI1 strongly and MAKR1/BKL1 weakly inhibited plant growth, but BKL2 and the MAKR family did not inhibit plant growth. Functional study of the chimeras of their N- and C-termini showed that only the BKI1 family was partially reconstructable, supporting stepwise evolution by a seesaw mechanism between their C- and N-termini to alternately gain an ability to bind and inhibit BRI1, respectively. Nevertheless, the C-terminal BRI1-interacting motif best defines the divergence of BKI1/MAKRs. Therefore, BKI1 and MAKR families evolved by gradually gaining and losing the same function, respectively, extremizing divergent evolution and adding insights into gene (BKI1/MAKR) duplication and divergence.
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Two Conserved Amino Acids Characterized in the Island Domain Are Essential for the Biological Functions of Brassinolide Receptors. Int J Mol Sci 2022; 23:ijms231911454. [PMID: 36232750 PMCID: PMC9570414 DOI: 10.3390/ijms231911454] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2022] [Revised: 09/19/2022] [Accepted: 09/26/2022] [Indexed: 11/16/2022] Open
Abstract
Brassinosteroids (BRs) play important roles in plant growth and development, and BR perception is the pivotal process required to trigger BR signaling. In angiosperms, BR insensitive 1 (BRI1) is the essential BR receptor, because its mutants exhibit an extremely dwarf phenotype in Arabidopsis. Two other BR receptors, BRI1-like 1 (BRL1) and BRI1-like 3 (BRL3), are shown to be not indispensable. All BR receptors require an island domain (ID) responsible for BR perception. However, the biological functional significance of residues in the ID remains unknown. Based on the crystal structure and sequence alignments analysis of BR receptors, we identified two residues 597 and 599 of AtBRI1 that were highly conserved within a BR receptor but diversified among different BR receptors. Both of these residues are tyrosine in BRI1, while BRL1/BRL3 fixes two phenylalanines. The experimental findings revealed that, except BRI1Y597F and BRI1Y599F, substitutions of residues 597 and 599 with the remaining 18 amino acids differently impaired BR signaling and, surprisingly, BRI1Y599F showed a weaker phenotype than BRI1Y599 did, implying that these residues were the key sites to differentiate BR receptors from a non-BR receptor, and the essential BR receptor BRI1 from BRL1/3, which possibly results from positive selection via gain of function during evolution.
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Zheng B, Xing K, Zhang J, Liu H, Ali K, Li W, Bai Q, Ren H. Evolutionary Analysis and Functional Identification of Ancient Brassinosteroid Receptors in Ceratopteris richardii. Int J Mol Sci 2022; 23:ijms23126795. [PMID: 35743240 PMCID: PMC9223546 DOI: 10.3390/ijms23126795] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2022] [Revised: 06/15/2022] [Accepted: 06/16/2022] [Indexed: 01/15/2023] Open
Abstract
Phytohormones play an important role in the adaptive evolution of terrestrial plants. Brassinosteroids (BRs) are essential hormones that regulate multiple aspects of plant growth and development in angiosperms, but the presence of BR signaling in non-seed plants such as ferns remains unknown. Here, we found that BR promotes the growth of Ceratopteris richardii, while the synthetic inhibitor PCZ inhibits the growth. Using full-length transcriptome sequencing, we identified four BRI1-like receptors. By constructing chimeric receptors, we found that the kinase domains of these four receptors could trigger BR downstream signaling. Further, the extracellular domains of two receptors were functionally interchangeable with that of BRI1. In addition, we identified a co-receptor, CtSERK1, that could phosphorylate with CtBRL2s in vitro. Together, these proved the presence of a receptor complex in Ceratopteris richardii that might perceive BR and activate downstream hormone signaling. Our results shed light on the biological and molecular mechanisms of BR signaling in ferns and the role of BR hormone signaling in the adaptive evolution of terrestrial plants.
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