1
|
García-Martín JM, Muro A, Fernández-Soto P. Diagnosis of Human Endemic Mycoses Caused by Thermally Dimorphic Fungi: From Classical to Molecular Methods. J Fungi (Basel) 2024; 10:637. [PMID: 39330397 PMCID: PMC11432851 DOI: 10.3390/jof10090637] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2024] [Revised: 08/23/2024] [Accepted: 08/26/2024] [Indexed: 09/28/2024] Open
Abstract
Human endemic mycoses are potentially fatal diseases caused by a diverse group of fungi that can alter their morphology in response to an increase in temperature. These thermally dimorphic fungi affect both healthy and immunocompromised hosts, causing a substantial health and economic burden. Despite this, the diagnosis of endemic mycoses is still a formidable challenge for several reasons, including similar symptomatology, limited utility of classical diagnostic methods, inaccessibility to reliable molecular approaches in most endemic areas, and a lack of clinical suspicion out of these regions. This review summarizes essential knowledge on thermally dimorphic fungi and the life-threatening diseases they cause. The principle, advantages and limitations of the methods traditionally used for their diagnosis are also described, along with the application status and future directions for the development of alternative diagnostic strategies, which could help to reduce the disease burden in endemic areas.
Collapse
Affiliation(s)
- Joaquina María García-Martín
- Infectious and Tropical Diseases Research Group (e-INTRO), Biomedical Research Institute of Salamanca-Research Centre for Tropical Diseases at the University of Salamanca (IBSAL-CIETUS), Faculty of Pharmacy, University of Salamanca, 37007 Salamanca, Spain; (A.M.); (P.F.-S.)
| | | | | |
Collapse
|
2
|
Kassis C, Eric H, Nicolas B, John W, Christopher D, Cody B, Kendra C, Shanna N, Mary M, Joseph WL. Diagnosis of Coccidioidomycosis with the Second-Generation Miravista IgG and IgM Enzyme Immunoassay and the Role of Adding Miravista Coccidioides Antigen Detection to Immunodiagnostic Assays. Med Mycol 2024; 62:myae063. [PMID: 38871943 DOI: 10.1093/mmy/myae063] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2024] [Revised: 04/26/2024] [Accepted: 06/12/2024] [Indexed: 06/15/2024] Open
Abstract
In the present study, we validate and compare the second-generation Miravista Coccidioides IgG and IgM enzyme immunoassays (EIA) (MiraVista Diagnostics [MVD] Ab EIA) to Meridian Diagnostics Coccidioides IgG and IgM EIA (Meridian Ab EIA), immunodiffusion (ID) and complement fixation (CF). We also evaluated whether the addition of Coccidioides antigen testing to anti-Coccidioides antibody testing increased the sensitivity for the diagnosis of currently active coccidioidomycosis. We retrospectively studied 555 patients evaluated at Valleywise Health Medical Center between January 2013 and May 2017 for whom coccidioidomycosis was suspected and samples were submitted to MVD for testing. Specimens were tested for antigen in the MVD antigen enzyme immunoassay (MVD Ag EIA) and for IgG and IgM antibodies with MVD and Meridian Diagnostics EIAs. ID and CF were obtained from medical records. Sensitivity and specificity were 83.0% and 91.1% or MVD Ab EIA, 69.3% and 99.7% for Meridian Ab EIA, 85.4% and 100% for ID and 65.5% and 100% for CF. Combined MVD antigen and antibody detection by EIA and ID resulted in increased sensitivity in disseminated and pulmonary disease (MVD Ag/MVD Ab: 100%, 88.3%; MVD Ag/Meridian Ab: 98.2%, 78.6%; and MVD Ag/ID: 100%, 91.7%). The detection of antibodies by MVD EIA was more sensitive than Meridian EIA or CF but similar to ID. This study supports the use of antigen testing in immunocompromised patients and those with suspected disseminated disease. Furthermore, the addition of antigen detection by EIA to antibody detection resulted in higher sensitivity of all serological tests.
Collapse
Affiliation(s)
| | - Holbrook Eric
- MiraVista Diagnostics, 46241, Indianapolis, Indiana, USA
| | - Barros Nicolas
- MiraVista Diagnostics, 46241, Indianapolis, Indiana, USA
- Department of Medicine, Indiana University School of Medicine, 46202, Indianapolis, Indiana
| | - Witt John
- MiraVista Diagnostics, 46241, Indianapolis, Indiana, USA
| | | | - Banks Cody
- MiraVista Diagnostics, 46241, Indianapolis, Indiana, USA
| | - Carlson Kendra
- MiraVista Diagnostics, 46241, Indianapolis, Indiana, USA
| | | | - Murlow Mary
- Valleywise Health Medical Center, 85008 Phoenix, Arizona
| | - Wheat L Joseph
- MiraVista Diagnostics, 46241, Indianapolis, Indiana, USA
| |
Collapse
|
3
|
Malo J, Natt B, Chaudhary S, Knox KS. Prophylaxis in Lung Transplant Recipients. Clin Infect Dis 2023; 76:368-369. [PMID: 36037080 DOI: 10.1093/cid/ciac706] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2022] [Accepted: 08/25/2022] [Indexed: 01/18/2023] Open
Affiliation(s)
- Joshua Malo
- Department of Medicine, University of Arizona College of Medicine-Tucson, Tucson, Arizona, USA
| | - Bhupinder Natt
- Department of Medicine, University of Arizona College of Medicine-Tucson, Tucson, Arizona, USA
| | - Sachin Chaudhary
- Department of Medicine, University of Arizona College of Medicine-Tucson, Tucson, Arizona, USA
| | - Kenneth S Knox
- Department of Medicine, University of Arizona College of Medicine-Phoenix, Phoenix, Arizona, USA
| |
Collapse
|
4
|
Jugler C, Grill FJ, Eidenberger L, Karr TL, Grys TE, Steinkellner H, Lake DF, Chen Q. Humanization and expression of IgG and IgM antibodies in plants as potential diagnostic reagents for Valley Fever. FRONTIERS IN PLANT SCIENCE 2022; 13:925008. [PMID: 36119630 PMCID: PMC9478164 DOI: 10.3389/fpls.2022.925008] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/21/2022] [Accepted: 08/12/2022] [Indexed: 05/10/2023]
Abstract
Monoclonal antibodies (mAbs) are important proteins used in many life science applications, from diagnostics to therapeutics. High demand for mAbs for different applications urges the development of rapid and reliable recombinant production platforms. Plants provide a quick and inexpensive system for producing recombinant mAbs. Moreover, when paired with an established platform for mAb discovery, plants can easily be tailored to produce mAbs of different isotypes against the same target. Here, we demonstrate that a hybridoma-generated mouse mAb against chitinase 1 (CTS1), an antigen from Coccidioides spp., can be biologically engineered for use with serologic diagnostic test kits for coccidioidomycosis (Valley Fever) using plant expression. The original mouse IgG was modified and recombinantly produced in glycoengineered Nicotiana benthamiana plants via transient expression as IgG and IgM isotypes with human kappa, gamma, and mu constant regions. The two mAb isotypes produced in plants were shown to maintain target antigen recognition to CTS1 using similar reagents as the Food and Drug Administration (FDA)-approved Valley Fever diagnostic kits. As none of the currently approved kits provide antibody dilution controls, humanization of antibodies that bind to CTS1, a major component of the diagnostic antigen preparation, may provide a solution to the lack of consistently reactive antibody controls for Valley Fever diagnosis. Furthermore, our work provides a foundation for reproducible and consistent production of recombinant mAbs engineered to have a specific isotype for use in diagnostic assays.
Collapse
Affiliation(s)
- Collin Jugler
- The Biodesign Institute, Arizona State University, Tempe, AZ, United States
- School of Life Sciences, Arizona State University, Tempe, AZ, United States
| | - Francisca J. Grill
- School of Life Sciences, Arizona State University, Tempe, AZ, United States
| | - Lukas Eidenberger
- Department of Applied Genetics and Cell Biology, University of Natural Resources and Life Sciences, Vienna, Austria
| | - Timothy L. Karr
- The Biodesign Institute, Arizona State University, Tempe, AZ, United States
| | - Thomas E. Grys
- Laboratory Medicine and Pathology, Mayo Clinic, Phoenix, AZ, United States
| | - Herta Steinkellner
- Department of Applied Genetics and Cell Biology, University of Natural Resources and Life Sciences, Vienna, Austria
| | - Douglas F. Lake
- The Biodesign Institute, Arizona State University, Tempe, AZ, United States
- School of Life Sciences, Arizona State University, Tempe, AZ, United States
| | - Qiang Chen
- The Biodesign Institute, Arizona State University, Tempe, AZ, United States
- School of Life Sciences, Arizona State University, Tempe, AZ, United States
| |
Collapse
|
5
|
Kassis C, Durkin M, Holbrook E, Myers R, Wheat L. Advances in Diagnosis of Progressive Pulmonary and Disseminated Coccidioidomycosis. Clin Infect Dis 2021; 72:968-975. [PMID: 32108231 PMCID: PMC7958817 DOI: 10.1093/cid/ciaa188] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2019] [Accepted: 02/25/2020] [Indexed: 11/13/2022] Open
Abstract
BACKGROUND Antibody detection is the main method for diagnosis of coccidioidomycosis, but it has limitations. The Coccidioides antigen enzyme immunoassay is recommended for testing cerebrospinal fluid in suspected meningitis. Reports on urine and serum antigen detection evaluated small numbers of patients who were mostly immunocompromised. The purpose of this study was to assess the accuracy of combined antibody and antigen detection for diagnosis. METHODS A retrospective study, including all patients in whom Coccidioides antigen detection in serum was performed between January 2013 and May 2017, was conducted at Valleywise Health Medical Center (formerly Maricopa Integrated Health System). Sensitivity and specificity of antigen and antibody were evaluated in 158 cases and 487 controls. RESULTS The sensitivity of antibody detection by immunodiffusion (ID) was 84.2%. The sensitivity of antigen detection was 57.0% if both urine and serum were tested and 36.7% if urine alone was tested. The sensitivity of combining antigen and ID antibody detection was 93.0%. The sensitivity of urine and serum antigen detection was 55.4% in proven and 58.7% in probable cases, 79.1% in disseminated and 41.6% in pulmonary cases, and 74.7% in immunocompromised and 40.0% in immunocompetent patients. Specificity was 99.4% for antigen detection and 96.5% for ID antibody detection. Diagnostic accuracy was 95.4% for ID antibody and antigen detection, 93.6% for ID antibody alone, and 89.1% for pathology or culture. CONCLUSIONS These findings support combined antibody and antigen detection for diagnosis of progressive coccidioidomycosis. The diagnosis may have been missed if antigen detection was not performed.
Collapse
Affiliation(s)
- Christelle Kassis
- Valleywise Health Medical Center (formerly known as Maricopa Integrated Health System), Phoenix, Arizona, USA
| | | | | | - Robert Myers
- Valleywise Health Medical Center (formerly known as Maricopa Integrated Health System), Phoenix, Arizona, USA
| | | |
Collapse
|
6
|
Stevens DA, Martinez M, Sass G, Pappagianis D, Doherty B, Kutsche H, McGuire M. Comparative Study of Newer and Established Methods of Diagnosing Coccidioidal Meningitis. J Fungi (Basel) 2020; 6:jof6030125. [PMID: 32759879 PMCID: PMC7558155 DOI: 10.3390/jof6030125] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2020] [Revised: 07/27/2020] [Accepted: 07/28/2020] [Indexed: 11/16/2022] Open
Abstract
Meningitis is the most devastating form of coccidioidomycosis. A convenient, rapid diagnostic method could result in early treatment and avoid many meningitis complications. We studied cerebrospinal fluid (CSF) samples in patients with documented coccidioidal meningitis, and controls, with complement fixation (CF), immunodiffusion (ID) (the “classical” assays), lateral flow assays (LFA; one-strip and two-strip), and two enzyme immunoassays (EIA). The two-strip LFA and EIAs not only enabled separate testing for IgG and IgM antibodies separately, but also could aggregate results for each method. CF with ID or the aggregate use of IgG and IgM tests were considered optimal test uses. LFAs and EIAs were evaluated at 1:21 and 1:441 dilutions of specimens. All assays were compared to true patient status. With 49 patient specimens and 40 controls, this is the largest comparative study of CSF coccidioidal diagnostics. Sensitivity of these tests ranged from 71–95% and specificity 90–100%. IgM assays were less sensitive. Assays at 1:441 were similarly specific but less sensitive, suggesting that serial dilutions of samples could result in assays yielding titers. Agreement of positive results on cases was 87–100%. When kits are available, hospital laboratories in endemic areas can perform testing. LFA assays do not require a laboratory, are simple to use, and give rapid results, potentially even at the bedside.
Collapse
Affiliation(s)
- David A. Stevens
- California Institute for Medical Research, 2260 Clove Drive, San Jose, CA 95128, USA; (M.M.); (G.S.)
- Division of Infectious Diseases and Geographic Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA
- Correspondence: ; Tel.: +1-408-998-4554
| | - Marife Martinez
- California Institute for Medical Research, 2260 Clove Drive, San Jose, CA 95128, USA; (M.M.); (G.S.)
| | - Gabriele Sass
- California Institute for Medical Research, 2260 Clove Drive, San Jose, CA 95128, USA; (M.M.); (G.S.)
| | - Demosthenes Pappagianis
- Department of Medical Microbiology, University of California School of Medicine, Davis, CA 95616, USA;
| | - Brian Doherty
- IMMY, Inc., 2701 Corporate Center Drive, Norman, OK 73069, USA; (B.D.); (H.K.); (M.M.)
| | - Hannah Kutsche
- IMMY, Inc., 2701 Corporate Center Drive, Norman, OK 73069, USA; (B.D.); (H.K.); (M.M.)
| | - Meredith McGuire
- IMMY, Inc., 2701 Corporate Center Drive, Norman, OK 73069, USA; (B.D.); (H.K.); (M.M.)
| |
Collapse
|
7
|
Malo J, Holbrook E, Zangeneh T, Strawter C, Oren E, Robey I, Erickson H, Carranza-Chahal R, Durkin M, Thompson C, Hoover SE, Ampel NM, Wheat LJ, Knox KS. Comparison of three anti-coccidioides antibody enzyme immunoassay kits for the diagnosis of coccidioidomycosis. Med Mycol 2020; 58:774-778. [DOI: 10.1093/mmy/myz125] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2019] [Revised: 10/03/2019] [Accepted: 12/02/2019] [Indexed: 11/14/2022] Open
Abstract
AbstractCoccidioidomycosis is a common cause of community-acquired pneumonia in endemic areas of the southwestern United States. Clinical presentations range from self-limited disease to severe, disseminated disease. As such, early and accurate diagnosis is essential to ensure appropriate treatment and monitoring. Currently available diagnostic testing has variable accuracy, particularly in certain patient populations, and new tests may offer improved accuracy for the diagnosis of coccidioidomycosis. Serum samples from patients with coccidioidomycosis and controls were tested for immunoglobulin G (IgG) and immunoglobulin M (IgM) antibodies using the MVista Coccidioides antibody detection EIA and two commonly used commercial enzyme immunoassay (EIA) kits: the IMMY Omega EIA and the Meridian Premier EIA. The sensitivity of the IgG antibody detection was 87.4% using the MVista test compared to 46.6% for IMMY and 70.9% for Meridian. The sensitivity for IgM antibody detection was 61.2% for the MVista test, 22.3% for IMMY and 29.1% for Meridian. For IgG antibody detection, specificity was 90% for the MVista EIA, 94.6% for IMMY, 96.4% for Meridian. For IgM antibody detection, specificity was 95.3% for the MVista test 98.2% for IMMY and 99.1% for Meridian. The MVista Coccidioides antibody EIA offers improved sensitivity, including among high-risk patient populations, for the detection of IgG and IgM antibodies in comparison to other currently available EIAs.
Collapse
Affiliation(s)
- Joshua Malo
- Department of Medicine, The University of Arizona College of Medicine, Tucson, Arizona USA
| | | | - Tirdad Zangeneh
- Department of Medicine, The University of Arizona College of Medicine, Tucson, Arizona USA
| | - Chris Strawter
- Department of Medicine, The University of Arizona College of Medicine, Tucson, Arizona USA
| | - Eyal Oren
- Department of Medicine, The University of Arizona College of Medicine, Tucson, Arizona USA
| | - Ian Robey
- Department of Medicine, The University of Arizona College of Medicine, Tucson, Arizona USA
| | - Heidi Erickson
- Department of Medicine, The University of Arizona College of Medicine, Tucson, Arizona USA
| | | | | | - Cindy Thompson
- Department of Medicine, The University of Arizona College of Medicine, Tucson, Arizona USA
| | - Susan E Hoover
- Department of Medicine, University of South Dakota Sanford School of Medicine, Sioux Falls, South Dakota USA
| | - Neil M Ampel
- Department of Medicine, The University of Arizona College of Medicine, Tucson, Arizona USA
| | | | - Kenneth S Knox
- Department of Medicine, The University of Arizona College of Medicine, Tucson, Arizona USA
| |
Collapse
|