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For: Fernández R, Laumer CE, Vahtera V, Libro S, Kaluziak S, Sharma PP, Pérez-Porro AR, Edgecombe GD, Giribet G. Evaluating topological conflict in centipede phylogeny using transcriptomic data sets. Mol Biol Evol 2014;31:1500-13. [PMID: 24674821 DOI: 10.1093/molbev/msu108] [Citation(s) in RCA: 60] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]  Open
Number Cited by Other Article(s)
1
Ellsworth SA, Rautsaw RM, Ward MJ, Holding ML, Rokyta DR. Selection Across the Three-Dimensional Structure of Venom Proteins from North American Scolopendromorph Centipedes. J Mol Evol 2024:10.1007/s00239-024-10191-y. [PMID: 39026042 DOI: 10.1007/s00239-024-10191-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2024] [Accepted: 07/09/2024] [Indexed: 07/20/2024]
2
Mitić BM, Jovanović VB, Todosijević MM, Eckhard M, Vasiljević LC, Tešević VV, Vujisić LV. Chemical defence of a centipede (Clinopodes flavidus). JOURNAL OF INSECT PHYSIOLOGY 2024;155:104649. [PMID: 38754699 DOI: 10.1016/j.jinsphys.2024.104649] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/24/2024] [Revised: 05/13/2024] [Accepted: 05/13/2024] [Indexed: 05/18/2024]
3
Bharti DK, Pawar PY, Edgecombe GD, Joshi J. Genetic diversity varies with species traits and latitude in predatory soil arthropods (Myriapoda: Chilopoda). GLOBAL ECOLOGY AND BIOGEOGRAPHY : A JOURNAL OF MACROECOLOGY 2023;32:1508-1521. [PMID: 38708411 PMCID: PMC7615927 DOI: 10.1111/geb.13709] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/18/2022] [Accepted: 05/13/2023] [Indexed: 05/07/2024]
4
Benítez-Álvarez L, Leria L, Dols-Serrate D, Riutort M. Building Phylogenies from Transcriptomic Data. Methods Mol Biol 2023;2680:1-27. [PMID: 37428368 DOI: 10.1007/978-1-0716-3275-8_1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/11/2023]
5
Phylotranscriptomics interrogation uncovers a complex evolutionary history for the planarian genus Dugesia (Platyhelminthes, Tricladida) in the Western Mediterranean. Mol Phylogenet Evol 2023;178:107649. [PMID: 36280167 DOI: 10.1016/j.ympev.2022.107649] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2022] [Revised: 10/13/2022] [Accepted: 10/18/2022] [Indexed: 11/17/2022]
6
Benavides LR, Edgecombe GD, Giribet G. Re-evaluating and dating myriapod diversification with phylotranscriptomics under a regime of dense taxon sampling. Mol Phylogenet Evol 2023;178:107621. [PMID: 36116731 DOI: 10.1016/j.ympev.2022.107621] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2022] [Revised: 08/17/2022] [Accepted: 08/18/2022] [Indexed: 12/14/2022]
7
Ding J, Lan H, Xu W, Chen Y, Wu H, Jiang H, Wang J, Wu Y, Liu H. Two complete mitochondrial genomes in Scolopendra and a comparative analysis of tRNA rearrangements in centipedes. Mol Biol Rep 2022;49:6173-6180. [PMID: 35411482 DOI: 10.1007/s11033-022-07409-x] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2021] [Accepted: 03/21/2022] [Indexed: 11/26/2022]
8
Wang J, Bai Y, Zhao H, Mu R, Dong Y. Reinvestigating the phylogeny of Myriapoda with more extensive taxon sampling and novel genetic perspective. PeerJ 2022;9:e12691. [PMID: 35036164 PMCID: PMC8710254 DOI: 10.7717/peerj.12691] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2021] [Accepted: 12/05/2021] [Indexed: 11/20/2022]  Open
9
Benavides LR, Jiang C, Giribet G. Mimopidae is the sister group to all other scolopendromorph centipedes (Chilopoda, Scolopendromorpha): a phylotranscriptomic approach. ORG DIVERS EVOL 2021. [DOI: 10.1007/s13127-021-00502-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
10
Szucsich NU, Bartel D, Blanke A, Böhm A, Donath A, Fukui M, Grove S, Liu S, Macek O, Machida R, Misof B, Nakagaki Y, Podsiadlowski L, Sekiya K, Tomizuka S, Von Reumont BM, Waterhouse RM, Walzl M, Meng G, Zhou X, Pass G, Meusemann K. Four myriapod relatives - but who are sisters? No end to debates on relationships among the four major myriapod subgroups. BMC Evol Biol 2020;20:144. [PMID: 33148176 PMCID: PMC7640414 DOI: 10.1186/s12862-020-01699-0] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2020] [Accepted: 09/30/2020] [Indexed: 11/20/2022]  Open
11
Treibergs KA, Giribet G. Differential Gene Expression Between Polymorphic Zooids of the Marine Bryozoan Bugulina stolonifera. G3 (BETHESDA, MD.) 2020;10:3843-3857. [PMID: 32859685 PMCID: PMC7534450 DOI: 10.1534/g3.120.401348] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/21/2020] [Accepted: 08/18/2020] [Indexed: 01/31/2023]
12
Yang S, Wang Y, Wang L, Kamau P, Zhang H, Luo A, Lu X, Lai R. Target switch of centipede toxins for antagonistic switch. SCIENCE ADVANCES 2020;6:eabb5734. [PMID: 32821839 PMCID: PMC7413724 DOI: 10.1126/sciadv.abb5734] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/04/2020] [Accepted: 06/26/2020] [Indexed: 05/02/2023]
13
Stojanović DZ, Vujić VD, Lučić LR, Tomić VT, Makarov SE, Mitić BM. Life after the mother's hug: Late post-embryonic development of Cryptops parisi (Chilopoda: Scolopendromorpha: Cryptopidae). ARTHROPOD STRUCTURE & DEVELOPMENT 2020;57:100948. [PMID: 32416473 DOI: 10.1016/j.asd.2020.100948] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/16/2020] [Revised: 04/17/2020] [Accepted: 04/20/2020] [Indexed: 06/11/2023]
14
Hu C, Wang S, Huang B, Liu H, Xu L, Zhigang Hu, Liu Y. The complete mitochondrial genome sequence of Scolopendra mutilans L. Koch, 1878 (Scolopendromorpha, Scolopendridae), with a comparative analysis of other centipede genomes. Zookeys 2020;925:73-88. [PMID: 32390741 PMCID: PMC7197263 DOI: 10.3897/zookeys.925.47820] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2019] [Accepted: 02/20/2020] [Indexed: 02/07/2023]  Open
15
Jenner RA, von Reumont BM, Campbell LI, Undheim EAB. Parallel Evolution of Complex Centipede Venoms Revealed by Comparative Proteotranscriptomic Analyses. Mol Biol Evol 2019;36:2748-2763. [PMID: 31396628 PMCID: PMC6878950 DOI: 10.1093/molbev/msz181] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]  Open
16
Chipman AD, Edgecombe GD. Developing an integrated understanding of the evolution of arthropod segmentation using fossils and evo-devo. Proc Biol Sci 2019;286:20191881. [PMID: 31575373 DOI: 10.1098/rspb.2019.1881] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]  Open
17
Mao X, Tsagkogeorga G, Thong VD, Rossiter SJ. Resolving evolutionary relationships among six closely related taxa of the horseshoe bats (Rhinolophus) with targeted resequencing data. Mol Phylogenet Evol 2019;139:106551. [DOI: 10.1016/j.ympev.2019.106551] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2019] [Revised: 06/11/2019] [Accepted: 07/01/2019] [Indexed: 01/04/2023]
18
Altenhoff AM, Levy J, Zarowiecki M, Tomiczek B, Warwick Vesztrocy A, Dalquen DA, Müller S, Telford MJ, Glover NM, Dylus D, Dessimoz C. OMA standalone: orthology inference among public and custom genomes and transcriptomes. Genome Res 2019;29:1152-1163. [PMID: 31235654 PMCID: PMC6633268 DOI: 10.1101/gr.243212.118] [Citation(s) in RCA: 80] [Impact Index Per Article: 13.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2018] [Accepted: 05/24/2019] [Indexed: 11/24/2022]
19
Laumer CE. Inferring Ancient Relationships with Genomic Data: A Commentary on Current Practices. Integr Comp Biol 2019;58:623-639. [PMID: 29982611 DOI: 10.1093/icb/icy075] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]  Open
20
Bravo GA, Antonelli A, Bacon CD, Bartoszek K, Blom MPK, Huynh S, Jones G, Knowles LL, Lamichhaney S, Marcussen T, Morlon H, Nakhleh LK, Oxelman B, Pfeil B, Schliep A, Wahlberg N, Werneck FP, Wiedenhoeft J, Willows-Munro S, Edwards SV. Embracing heterogeneity: coalescing the Tree of Life and the future of phylogenomics. PeerJ 2019;7:e6399. [PMID: 30783571 PMCID: PMC6378093 DOI: 10.7717/peerj.6399] [Citation(s) in RCA: 67] [Impact Index Per Article: 11.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2018] [Accepted: 01/07/2019] [Indexed: 12/23/2022]  Open
21
Álvarez-Campos P, Kenny NJ, Verdes A, Fernández R, Novo M, Giribet G, Riesgo A. Delegating Sex: Differential Gene Expression in Stolonizing Syllids Uncovers the Hormonal Control of Reproduction. Genome Biol Evol 2019;11:295-318. [PMID: 30535381 PMCID: PMC6350857 DOI: 10.1093/gbe/evy265] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 12/09/2018] [Indexed: 12/31/2022]  Open
22
Ward MJ, Rokyta DR. Venom-gland transcriptomics and venom proteomics of the giant Florida blue centipede, Scolopendra viridis. Toxicon 2018;152:121-136. [PMID: 30086358 DOI: 10.1016/j.toxicon.2018.07.030] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2018] [Revised: 07/25/2018] [Accepted: 07/31/2018] [Indexed: 12/19/2022]
23
Kallal RJ, Fernández R, Giribet G, Hormiga G. A phylotranscriptomic backbone of the orb-weaving spider family Araneidae (Arachnida, Araneae) supported by multiple methodological approaches. Mol Phylogenet Evol 2018;126:129-140. [PMID: 29635025 DOI: 10.1016/j.ympev.2018.04.007] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2018] [Revised: 03/05/2018] [Accepted: 04/06/2018] [Indexed: 01/01/2023]
24
Dai W, Zou M, Yang L, Du K, Chen W, Shen Y, Mayden RL, He S. Phylogenomic Perspective on the Relationships and Evolutionary History of the Major Otocephalan Lineages. Sci Rep 2018;8:205. [PMID: 29317769 PMCID: PMC5760653 DOI: 10.1038/s41598-017-18432-5] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2017] [Accepted: 12/11/2017] [Indexed: 12/21/2022]  Open
25
Fernández R, Edgecombe GD, Giribet G. Phylogenomics illuminates the backbone of the Myriapoda Tree of Life and reconciles morphological and molecular phylogenies. Sci Rep 2018;8:83. [PMID: 29311682 PMCID: PMC5758774 DOI: 10.1038/s41598-017-18562-w] [Citation(s) in RCA: 36] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2017] [Accepted: 12/14/2017] [Indexed: 11/30/2022]  Open
26
Giribet G, Buckman-Young RS, Costa CS, Baker CM, Benavides LR, Branstetter MG, Daniels SR, Pinto-da-Rocha R. The ‘Peripatos' in Eurogondwana? — Lack of evidence that southeast Asian onychophorans walked through Europe. INVERTEBR SYST 2018. [DOI: 10.1071/is18007] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
27
Dornburg A, Townsend JP, Wang Z. Maximizing Power in Phylogenetics and Phylogenomics: A Perspective Illuminated by Fungal Big Data. ADVANCES IN GENETICS 2017;100:1-47. [PMID: 29153398 DOI: 10.1016/bs.adgen.2017.09.007] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
28
Giribet G, Edgecombe GD. Current Understanding of Ecdysozoa and its Internal Phylogenetic Relationships. Integr Comp Biol 2017;57:455-466. [DOI: 10.1093/icb/icx072] [Citation(s) in RCA: 70] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
29
Mao X, Tsagkogeorga G, Bailey SE, Rossiter SJ. Genomics of introgression in the Chinese horseshoe bat (Rhinolophus sinicus) revealed by transcriptome sequencing. Biol J Linn Soc Lond 2017. [DOI: 10.1093/biolinnean/blx017] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
30
Insects, arachnids and centipedes venom: A powerful weapon against bacteria. A literature review. Toxicon 2017;130:91-103. [PMID: 28242227 DOI: 10.1016/j.toxicon.2017.02.020] [Citation(s) in RCA: 40] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2016] [Revised: 02/17/2017] [Accepted: 02/20/2017] [Indexed: 01/02/2023]
31
Fernández R, Sharma PP, Tourinho AL, Giribet G. The Opiliones tree of life: shedding light on harvestmen relationships through transcriptomics. Proc Biol Sci 2017;284:20162340. [PMID: 28228511 PMCID: PMC5326524 DOI: 10.1098/rspb.2016.2340] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2016] [Accepted: 01/27/2017] [Indexed: 12/12/2022]  Open
32
Bonato L, Bortolin F, Drago L, Orlando M, Dányi L. Evolution ofStrigamiacentipedes (Chilopoda): a first molecular assessment of phylogeny and divergence times. ZOOL SCR 2017. [DOI: 10.1111/zsc.12234] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
33
Undheim EAB, Jenner RA, King GF. Centipede venoms as a source of drug leads. Expert Opin Drug Discov 2016;11:1139-1149. [PMID: 27611363 DOI: 10.1080/17460441.2016.1235155] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
34
Fernández R, Edgecombe GD, Giribet G. Exploring Phylogenetic Relationships within Myriapoda and the Effects of Matrix Composition and Occupancy on Phylogenomic Reconstruction. Syst Biol 2016;65:871-89. [PMID: 27162151 PMCID: PMC4997009 DOI: 10.1093/sysbio/syw041] [Citation(s) in RCA: 74] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2015] [Accepted: 04/28/2016] [Indexed: 11/14/2022]  Open
35
Lozano-Fernandez J, Carton R, Tanner AR, Puttick MN, Blaxter M, Vinther J, Olesen J, Giribet G, Edgecombe GD, Pisani D. A molecular palaeobiological exploration of arthropod terrestrialization. Philos Trans R Soc Lond B Biol Sci 2016;371:20150133. [PMID: 27325830 PMCID: PMC4920334 DOI: 10.1098/rstb.2015.0133] [Citation(s) in RCA: 97] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 02/29/2016] [Indexed: 12/28/2022]  Open
36
Ballesteros JA, Hormiga G. A New Orthology Assessment Method for Phylogenomic Data: Unrooted Phylogenetic Orthology. Mol Biol Evol 2016;33:2117-34. [PMID: 27189539 DOI: 10.1093/molbev/msw069] [Citation(s) in RCA: 44] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]  Open
37
Mitić BM, Stojanović DZ, Antić DŽ, Ilić BS, Gedged AM, Borković-Mitić SS, Ristić NM, Živić NV, Makarov SE. Maternal care in epimorphic centipedes (Chilopoda: Phylactometria: Epimorpha) from the Balkan Peninsula. INVERTEBR REPROD DEV 2016. [DOI: 10.1080/07924259.2016.1143040] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
38
Zhang J, Gordon ERL, Forthman M, Hwang WS, Walden K, Swanson DR, Johnson KP, Meier R, Weirauch C. Evolution of the assassin's arms: insights from a phylogeny of combined transcriptomic and ribosomal DNA data (Heteroptera: Reduvioidea). Sci Rep 2016;6:22177. [PMID: 26916580 PMCID: PMC4768186 DOI: 10.1038/srep22177] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2015] [Accepted: 02/09/2016] [Indexed: 01/24/2023]  Open
39
Zhang L, Wu W, Yan HF, Ge XJ. Phylotranscriptomic Analysis Based on Coalescence was Less Influenced by the Evolving Rates and the Number of Genes: A Case Study in Ericales. Evol Bioinform Online 2016;11:81-91. [PMID: 26819541 PMCID: PMC4718149 DOI: 10.4137/ebo.s22448] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2015] [Revised: 09/24/2015] [Accepted: 09/28/2015] [Indexed: 12/19/2022]  Open
40
Novo M, Fernández R, Andrade SCS, Marchán DF, Cunha L, Díaz Cosín DJ. Phylogenomic analyses of a Mediterranean earthworm family (Annelida: Hormogastridae). Mol Phylogenet Evol 2015;94:473-478. [PMID: 26522608 DOI: 10.1016/j.ympev.2015.10.026] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2015] [Revised: 10/19/2015] [Accepted: 10/24/2015] [Indexed: 10/22/2022]
41
Akkari N, Enghoff H, Metscher BD. A New Dimension in Documenting New Species: High-Detail Imaging for Myriapod Taxonomy and First 3D Cybertype of a New Millipede Species (Diplopoda, Julida, Julidae). PLoS One 2015;10:e0135243. [PMID: 26309113 PMCID: PMC4550252 DOI: 10.1371/journal.pone.0135243] [Citation(s) in RCA: 44] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2015] [Accepted: 07/20/2015] [Indexed: 12/14/2022]  Open
42
Chen MY, Liang D, Zhang P. Selecting Question-Specific Genes to Reduce Incongruence in Phylogenomics: A Case Study of Jawed Vertebrate Backbone Phylogeny. Syst Biol 2015;64:1104-20. [PMID: 26276158 DOI: 10.1093/sysbio/syv059] [Citation(s) in RCA: 78] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2015] [Accepted: 08/10/2015] [Indexed: 11/13/2022]  Open
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Zapata F, Wilson NG, Howison M, Andrade SCS, Jörger KM, Schrödl M, Goetz FE, Giribet G, Dunn CW. Phylogenomic analyses of deep gastropod relationships reject Orthogastropoda. Proc Biol Sci 2015;281:20141739. [PMID: 25232139 DOI: 10.1098/rspb.2014.1739] [Citation(s) in RCA: 101] [Impact Index Per Article: 10.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]  Open
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Fernández R, Giribet G. Unnoticed in the tropics: phylogenomic resolution of the poorly known arachnid order Ricinulei (Arachnida). ROYAL SOCIETY OPEN SCIENCE 2015;2:150065. [PMID: 26543583 PMCID: PMC4632547 DOI: 10.1098/rsos.150065] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/09/2015] [Accepted: 05/29/2015] [Indexed: 06/05/2023]
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Chang Y, Wang S, Sekimoto S, Aerts AL, Choi C, Clum A, LaButti KM, Lindquist EA, Yee Ngan C, Ohm RA, Salamov AA, Grigoriev IV, Spatafora JW, Berbee ML. Phylogenomic Analyses Indicate that Early Fungi Evolved Digesting Cell Walls of Algal Ancestors of Land Plants. Genome Biol Evol 2015;7:1590-601. [PMID: 25977457 PMCID: PMC4494064 DOI: 10.1093/gbe/evv090] [Citation(s) in RCA: 142] [Impact Index Per Article: 14.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
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Whelan NV, Kocot KM, Halanych KM. Employing Phylogenomics to Resolve the Relationships among Cnidarians, Ctenophores, Sponges, Placozoans, and Bilaterians. Integr Comp Biol 2015;55:1084-95. [PMID: 25972566 DOI: 10.1093/icb/icv037] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
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Sharma PP, Fernández R, Esposito LA, González-Santillán E, Monod L. Phylogenomic resolution of scorpions reveals multilevel discordance with morphological phylogenetic signal. Proc Biol Sci 2015;282:20142953. [PMID: 25716788 PMCID: PMC4375871 DOI: 10.1098/rspb.2014.2953] [Citation(s) in RCA: 90] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2014] [Accepted: 01/26/2015] [Indexed: 01/22/2023]  Open
48
Production and packaging of a biological arsenal: evolution of centipede venoms under morphological constraint. Proc Natl Acad Sci U S A 2015;112:4026-31. [PMID: 25775536 DOI: 10.1073/pnas.1424068112] [Citation(s) in RCA: 45] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]  Open
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Laumer CE, Hejnol A, Giribet G. Nuclear genomic signals of the 'microturbellarian' roots of platyhelminth evolutionary innovation. eLife 2015;4:e05503. [PMID: 25764302 PMCID: PMC4398949 DOI: 10.7554/elife.05503] [Citation(s) in RCA: 114] [Impact Index Per Article: 11.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2014] [Accepted: 03/06/2015] [Indexed: 12/25/2022]  Open
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Undheim EAB, Fry BG, King GF. Centipede venom: recent discoveries and current state of knowledge. Toxins (Basel) 2015;7:679-704. [PMID: 25723324 PMCID: PMC4379518 DOI: 10.3390/toxins7030679] [Citation(s) in RCA: 67] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2014] [Revised: 02/13/2015] [Accepted: 02/15/2015] [Indexed: 12/27/2022]  Open
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