The 18S ribosomal RNA gene of a crustacean branchiopod Bosmina longirostris: comparison with another branchiopod Artemia salina

Sequences of the 18S rDNAs from two Collembolan insects: shorter sequences in the V4 and V7 regions

The complete 18S rDNA sequences were determined for Hypogastrura sp. and Crossodonthina koreana (Insecta: Collembola) using PCR cloning and Taq dideoxy sequencing. These two wingless insects show high sequence similarity to each other, without large insertions and/or deletions, and are clearly distinguished from the two dipteran insects Drosophila melanogaster and Aedes albopictus by shorter sequences in the V4 (61-76 bp) and in the V7 (89-104 bp). regions.

Blood and sporozoite stage-specific small subunit ribosomal RNA-encoding genes of the human malaria parasite Plasmodium vivax

Malaria parasites, unlike other eukaryotes, have developmentally controlled distinct small subunit ribosomal RNA (SSUrRNA)-encoding genes (SSUrDNA), sporozoite stage-specific C and blood stage-specific A genes. This report describes characterization of the C and A forms of SSUrDNA from the human malaria parasite Plasmodium vivax. We have aligned and compared these sequences with the reported SSUrDNA sequences of other human malaria parasites to identify the regions with potential for diagnostic probes. The comparison revealed the presence of seven conserved regions (> or = 90% similarity), four highly variable regions (< 60% similarity) and three semiconserved regions. The analysis also revealed that the A and C genes of P. vivax share more similarity with each other, as compared to the A and C genes of P. falciparum. Comparison of the SSUrDNA of human, monkey and rodent malaria parasites revealed that the A genes share more similarity with each other than the C genes share with each other.

Sequence of the 18S ribosomal RNA-encoding gene of the crustacean Philyra pisum: longer sequences of decapods in the V9 region

The complete sequence of the 18S rRNA gene of Philyra pisum was determined by using PCR cloning and Taq sequencing. The sequence was compared with those known from other crustaceans. The decapods (Oedignathus inermis, Pugettia quadridens, Philyra pisum) were distinguished from the other crustaceans (Artemia salina, Bosmina longirostris, Diastylis sp.) by longer sequences (17-41 bp) in the V9 region.