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For: Debin A, Laboulais C, Ouali M, Malvy C, Le Bret M, Svinarchuk F. Stability of G,A triple helices. Nucleic Acids Res 1999;27:2699-707. [PMID: 10373587 PMCID: PMC148479 DOI: 10.1093/nar/27.13.2699] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
Number Cited by Other Article(s)
1
Ylagan M, Xu Q, Kowalski J. TTSBBC: triplex target site biomarkers and barcodes in cancer. Nucleic Acids Res 2024:gkae312. [PMID: 38661214 DOI: 10.1093/nar/gkae312] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2024] [Revised: 03/28/2024] [Accepted: 04/10/2024] [Indexed: 04/26/2024]  Open
2
Abdi MH, Zamiri B, Pazuki G, Sardari S, Pearson CE. Pathogenic CANVAS-causing but not nonpathogenic RFC1 DNA/RNA repeat motifs form quadruplex or triplex structures. J Biol Chem 2023;299:105202. [PMID: 37660923 PMCID: PMC10563062 DOI: 10.1016/j.jbc.2023.105202] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2023] [Revised: 08/22/2023] [Accepted: 08/25/2023] [Indexed: 09/05/2023]  Open
3
Kaufmann B, Willinger O, Kikuchi N, Navon N, Kermas L, Goldberg S, Amit R. An Oligo-Library-Based Approach for Mapping DNA-DNA Triplex Interactions In Vitro. ACS Synth Biol 2021;10:1808-1820. [PMID: 34374529 DOI: 10.1021/acssynbio.1c00122] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
4
Boehm BJ, Whidborne C, Button AL, Pukala TL, Huang DM. DNA triplex structure, thermodynamics, and destabilisation: insight from molecular simulations. Phys Chem Chem Phys 2018;20:14013-14023. [PMID: 29744501 DOI: 10.1039/c8cp02385a] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
5
Role of long purine stretches in controlling the expression of genes associated with neurological disorders. Gene 2015;572:175-83. [DOI: 10.1016/j.gene.2015.07.007] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2015] [Revised: 06/17/2015] [Accepted: 07/02/2015] [Indexed: 11/22/2022]
6
Singh HN, Rajeswari MR. Identification of genes containing expanded purine repeats in the human genome and their apparent protective role against cancer. J Biomol Struct Dyn 2015;34:689-704. [PMID: 25990537 DOI: 10.1080/07391102.2015.1049553] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
7
Esguerra M, Nilsson L, Villa A. Triple helical DNA in a duplex context and base pair opening. Nucleic Acids Res 2014;42:11329-38. [PMID: 25228466 PMCID: PMC4191418 DOI: 10.1093/nar/gku848] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]  Open
8
Kaushik S, Kaushik M, Svinarchuk F, Malvy C, Fermandjian S, Kukreti S. Presence of divalent cation is not mandatory for the formation of intramolecular purine-motif triplex containing human c-jun protooncogene target. Biochemistry 2011;50:4132-42. [PMID: 21381700 DOI: 10.1021/bi1012589] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
9
Ayel E, Escudé C. In vitro selection of oligonucleotides that bind double-stranded DNA in the presence of triplex-stabilizing agents. Nucleic Acids Res 2010;38:e31. [PMID: 20007154 PMCID: PMC2836567 DOI: 10.1093/nar/gkp1139] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]  Open
10
Jenjaroenpun P, Kuznetsov VA. TTS mapping: integrative WEB tool for analysis of triplex formation target DNA sequences, G-quadruplets and non-protein coding regulatory DNA elements in the human genome. BMC Genomics 2009;10 Suppl 3:S9. [PMID: 19958507 PMCID: PMC2788396 DOI: 10.1186/1471-2164-10-s3-s9] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]  Open
11
Sun JS, Hélène C. Oligonucleotides and derivatives as gene-specific control agents. NUCLEOSIDES NUCLEOTIDES & NUCLEIC ACIDS 2003;22:489-505. [PMID: 14565225 DOI: 10.1081/ncn-120021950] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
12
McGuffie EM, Catapano CV. Design of a novel triple helix-forming oligodeoxyribonucleotide directed to the major promoter of the c-myc gene. Nucleic Acids Res 2002;30:2701-9. [PMID: 12060688 PMCID: PMC117288 DOI: 10.1093/nar/gkf376] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]  Open
13
Faria M, Giovannangeli C. Triplex-forming molecules: from concepts to applications. J Gene Med 2001;3:299-310. [PMID: 11529659 DOI: 10.1002/jgm.192] [Citation(s) in RCA: 66] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]  Open
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