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For: Giri CP, Gorovsky MA. DNase I sensitivity of ribosomal genes in isolated nucleosome core particles. Nucleic Acids Res 1980;8:197-214. [PMID: 6766552 PMCID: PMC327252 DOI: 10.1093/nar/8.1.197-e] [Citation(s) in RCA: 43] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]  Open
Number Cited by Other Article(s)
1
Muthabathula P, Suneetha S, Grace R. Genome-wide codon usage bias analysis in Beauveria bassiana. Bioinformation 2018;14:580-586. [PMID: 31223217 PMCID: PMC6563670 DOI: 10.6026/97320630014580] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2018] [Revised: 10/27/2018] [Accepted: 10/27/2018] [Indexed: 11/24/2022]  Open
2
Hamperl S, Wittner M, Babl V, Perez-Fernandez J, Tschochner H, Griesenbeck J. Chromatin states at ribosomal DNA loci. BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS 2013;1829:405-17. [PMID: 23291532 DOI: 10.1016/j.bbagrm.2012.12.007] [Citation(s) in RCA: 52] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/07/2012] [Revised: 11/16/2012] [Accepted: 12/21/2012] [Indexed: 12/29/2022]
3
Stumph WE, Baez M, Lawson GM, Tsai MJ, O'Malley BW. Higher-Order Structural Determinants for Expression of the Ovalbumin Gene Family. CIBA FOUNDATION SYMPOSIUM 98 - MOLECULAR BIOLOGY OF EGG MATURATION 2008;98:80-95. [PMID: 6557011 DOI: 10.1002/9780470720790.ch6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
4
Deoxyribonucleic acid methylation and chromatin organization in Tetrahymena thermophila. Mol Cell Biol 1997. [PMID: 9279374 DOI: 10.1128/mcb.1.7.600] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
5
Prescott DM. The DNA of ciliated protozoa. Microbiol Rev 1994;58:233-67. [PMID: 8078435 PMCID: PMC372963 DOI: 10.1128/mr.58.2.233-267.1994] [Citation(s) in RCA: 356] [Impact Index Per Article: 11.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
6
Thatcher TH, MacGaffey J, Bowen J, Horowitz S, Shapiro DL, Gorovsky MA. Independent evolutionary origin of histone H3.3-like variants of animals and Tetrahymena. Nucleic Acids Res 1994;22:180-6. [PMID: 8121802 PMCID: PMC307769 DOI: 10.1093/nar/22.2.180] [Citation(s) in RCA: 43] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]  Open
7
Smith HC, Rothblum LI. Ribosomal DNA sequences attached to the nuclear matrix. Biochem Genet 1987;25:863-79. [PMID: 3450275 DOI: 10.1007/bf00502606] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
8
Allegra P, Sterner R, Clayton DF, Allfrey VG. Affinity chromatographic purification of nucleosomes containing transcriptionally active DNA sequences. J Mol Biol 1987;196:379-88. [PMID: 3656449 DOI: 10.1016/0022-2836(87)90698-x] [Citation(s) in RCA: 140] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
9
Wu M, Allis CD, Richman R, Cook RG, Gorovsky MA. An intervening sequence in an unusual histone H1 gene of Tetrahymena thermophila. Proc Natl Acad Sci U S A 1986;83:8674-8. [PMID: 3464976 PMCID: PMC386993 DOI: 10.1073/pnas.83.22.8674] [Citation(s) in RCA: 94] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]  Open
10
Localization of specific rDNA spacer sequences to the mouse L-cell nucleolar matrix. Mol Cell Biol 1985. [PMID: 4033654 DOI: 10.1128/mcb.5.6.1287] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
11
Sargan DR, Butterworth PH. Eukaryotic ternary transcription complexes: transcription complexes of RNA polymerase II are associated with histone-containing, nucleosome-like particles in vivo. Nucleic Acids Res 1985;13:3805-22. [PMID: 4011443 PMCID: PMC341279 DOI: 10.1093/nar/13.11.3805] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]  Open
12
Bolla RI, Braaten DC, Shiomi Y, Hebert MB, Schlessinger D. Localization of specific rDNA spacer sequences to the mouse L-cell nucleolar matrix. Mol Cell Biol 1985;5:1287-94. [PMID: 4033654 PMCID: PMC366856 DOI: 10.1128/mcb.5.6.1287-1294.1985] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]  Open
13
Spadafora C, Crippa M. Compact structure of ribosomal chromatin in Xenopus laevis. Nucleic Acids Res 1984;12:2691-704. [PMID: 6709502 PMCID: PMC318699 DOI: 10.1093/nar/12.6.2691] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]  Open
14
Davis AH, Reudelhuber TL, Garrard WT. Varigated chromatin structures of mouse ribosomal RNA genes. J Mol Biol 1983;167:133-55. [PMID: 6864798 DOI: 10.1016/s0022-2836(83)80038-2] [Citation(s) in RCA: 71] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
15
Calzone FJ, Angerer RC, Gorovsky MA. Regulation of protein synthesis in Tetrahymena. Quantitative estimates of the parameters determining the rates of protein synthesis in growing, starved, and starved-deciliated cells. J Biol Chem 1983. [DOI: 10.1016/s0021-9258(18)32307-x] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]  Open
16
Ness PJ, Labhart P, Banz E, Koller T, Parish RW. Chromatin structure along the ribosomal DNA of Dictyostelium. Regional differences and changes accompanying cell differentiation. J Mol Biol 1983;166:361-81. [PMID: 6304325 DOI: 10.1016/s0022-2836(83)80090-4] [Citation(s) in RCA: 52] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
17
Colavito-Shepanski M, Gorovsky MA. The histone content of Tetrahymena ribosomal gene-containing chromatin. J Biol Chem 1983. [DOI: 10.1016/s0021-9258(20)81988-7] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]  Open
18
Spiker S, Murray MG, Thompson WF. DNase I sensitivity of transcriptionally active genes in intact nuclei and isolated chromatin of plants. Proc Natl Acad Sci U S A 1983;80:815-9. [PMID: 6219388 PMCID: PMC393471 DOI: 10.1073/pnas.80.3.815] [Citation(s) in RCA: 74] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]  Open
19
Pflugfelder GO, Sonnenbichler J. Oligonucleosomes as a model system for chromatin transcription. Transcription with Escherichia coli DNA-dependent RNA polymerase. J Mol Biol 1982;158:365-84. [PMID: 6182296 DOI: 10.1016/0022-2836(82)90203-0] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
20
Green D, Tew KD, Hisamatsu T, Schein PS. Correlation of nitrosourea murine bone marrow toxicity with deoxyribonucleic acid alkylation and chromatin binding sites. Biochem Pharmacol 1982;31:1671-9. [PMID: 7104031 DOI: 10.1016/0006-2952(82)90667-0] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
21
Nielsen PE. Photoaffinity labeling of chromatin. Synthesis and properties of arylazido derivatives of 9-aminoacridine: potential photolabels for chromatin studies. EUROPEAN JOURNAL OF BIOCHEMISTRY 1982;122:283-9. [PMID: 7060576 DOI: 10.1111/j.1432-1033.1982.tb05878.x] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
22
Definition of 5‘ and 3‘ structural boundaries of the chromatin domain containing the ovalbumin multigene family. J Biol Chem 1982. [DOI: 10.1016/s0021-9258(19)68221-9] [Citation(s) in RCA: 107] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
23
Cartwright IL, Abmayr SM, Fleischmann G, Lowenhaupt K, Elgin SC, Keene MA, Howard GC. Chromatin structure and gene activity: the role of nonhistone chromosomal proteins. CRC CRITICAL REVIEWS IN BIOCHEMISTRY 1982;13:1-86. [PMID: 6751690 DOI: 10.3109/10409238209108709] [Citation(s) in RCA: 154] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
24
Chiu SM, Oleinick NL. The sensitivity of active and inactive chromatin to ionizing radiation-induced DNA strand breakage. INTERNATIONAL JOURNAL OF RADIATION BIOLOGY AND RELATED STUDIES IN PHYSICS, CHEMISTRY, AND MEDICINE 1982;41:71-7. [PMID: 6800971 DOI: 10.1080/09553008214550061] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
25
Berkowitz EM, Riggs EA. Characterization of rat liver oligonucleosomes enriched in transcriptionally active genes: evidence for altered base composition and a shortened nucleosome repeat. Biochemistry 1981;20:7284-90. [PMID: 7317381 DOI: 10.1021/bi00528a036] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
26
Nielsen PE. Photoaffinity labeling of chromatin: nuclease-sensitive chromatin shows preferential labeling of histone H1. FEBS Lett 1981;135:173-6. [PMID: 7319033 DOI: 10.1016/0014-5793(81)80970-2] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
27
Vavra KJ, Pederson DS, Gorovsky MA. Nuclease sensitivity of chromatin containing active genes: kinetic analyses utilizing continuous elution of digestion products from an ultrafiltration cell. Nucleic Acids Res 1981;9:5825-43. [PMID: 6273809 PMCID: PMC327563 DOI: 10.1093/nar/9.21.5825] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]  Open
28
The large high mobility group proteins of rainbow trout are localized predominantly in the nucleus and nucleoli of a cultured trout cell line. J Biol Chem 1981. [DOI: 10.1016/s0021-9258(19)68916-7] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]  Open
29
Pratt K, Hattman S. Deoxyribonucleic acid methylation and chromatin organization in Tetrahymena thermophila. Mol Cell Biol 1981;1:600-8. [PMID: 9279374 PMCID: PMC369708 DOI: 10.1128/mcb.1.7.600-608.1981] [Citation(s) in RCA: 26] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]  Open
30
Borchsenius S, Bonven B, Leer JC, Westergaard O. Nuclease-sensitive regions on the extrachromosomal r-chromatin from Tetrahymena pyriformis. EUROPEAN JOURNAL OF BIOCHEMISTRY 1981;117:245-50. [PMID: 6268405 DOI: 10.1111/j.1432-1033.1981.tb06329.x] [Citation(s) in RCA: 22] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
31
Kleinschmidt AM, Martinson HG. Structure of nucleosome core particles containing uH2A (A24). Nucleic Acids Res 1981;9:2423-31. [PMID: 6269048 PMCID: PMC326862 DOI: 10.1093/nar/9.11.2423] [Citation(s) in RCA: 38] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]  Open
32
Lishanskaya AI. Successful separation of the transcriptionally-active chromatin fraction from pigeon reticulocytes and calf thymus. FEBS Lett 1980;121:207-10. [PMID: 7461127 DOI: 10.1016/0014-5793(80)80343-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
33
Hamana K, Zama M. Selective release of HMG nonhistone proteins during DNase digestion of Tetrahymena chromatin at different stages of the cell cycle. Nucleic Acids Res 1980;8:5275-88. [PMID: 6258140 PMCID: PMC324301 DOI: 10.1093/nar/8.22.5275] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]  Open
34
Burch JB, Martinson HG. The roles of H1, the histone core and DNA length in the unfolding of nucleosomes at low ionic strength. Nucleic Acids Res 1980;8:4969-87. [PMID: 7443530 PMCID: PMC324273 DOI: 10.1093/nar/8.21.4969] [Citation(s) in RCA: 34] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]  Open
35
Guttman SD, Glover CV, Allis CD, Gorovsky MA. Heat shock, deciliation and release from anoxia induce the synthesis of the same set of polypeptides in starved T. pyriformis. Cell 1980;22:299-307. [PMID: 6775819 DOI: 10.1016/0092-8674(80)90177-4] [Citation(s) in RCA: 171] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
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