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For: Sun P, Speicher NK, Röttger R, Guo J, Baumbach J. Bi-Force: large-scale bicluster editing and its application to gene expression data biclustering. Nucleic Acids Res 2014;42:e78. [PMID: 24682815 PMCID: PMC5769343 DOI: 10.1093/nar/gku201] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
Number Cited by Other Article(s)
1
Singh V, Singh V. Inferring Interaction Networks from Transcriptomic Data: Methods and Applications. Methods Mol Biol 2024;2812:11-37. [PMID: 39068355 DOI: 10.1007/978-1-0716-3886-6_2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/30/2024]
2
Bi-EB: Empirical Bayesian Biclustering for Multi-Omics Data Integration Pattern Identification among Species. Genes (Basel) 2022;13:genes13111982. [DOI: 10.3390/genes13111982] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2022] [Revised: 09/20/2022] [Accepted: 09/23/2022] [Indexed: 11/16/2022]  Open
3
Wang J, Wang X, Yu G, Domeniconi C, Yu Z, Zhang Z. Discovering Multiple Co-Clusterings With Matrix Factorization. IEEE TRANSACTIONS ON CYBERNETICS 2021;51:3576-3587. [PMID: 31751260 DOI: 10.1109/tcyb.2019.2950568] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
4
Tsur D. Faster parameterized algorithm for Bicluster Editing. INFORM PROCESS LETT 2021. [DOI: 10.1016/j.ipl.2021.106095] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
5
Zolotareva O, Khakabimamaghani S, Isaeva OI, Chervontseva Z, Savchik A, Ester M. Identification Of Differentially Expressed Gene Modules In Heterogeneous Diseases. Bioinformatics 2020;37:1691-1698. [PMID: 33325506 DOI: 10.1093/bioinformatics/btaa1038] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2020] [Revised: 11/25/2020] [Accepted: 12/02/2020] [Indexed: 11/14/2022]  Open
6
Yu G, Yu X, Wang J. Network-aided Bi-Clustering for discovering cancer subtypes. Sci Rep 2017;7:1046. [PMID: 28432308 PMCID: PMC5430742 DOI: 10.1038/s41598-017-01064-0] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2016] [Accepted: 03/28/2017] [Indexed: 12/18/2022]  Open
7
Hauschild AC, Frisch T, Baumbach JI, Baumbach J. Carotta: Revealing Hidden Confounder Markers in Metabolic Breath Profiles. Metabolites 2015;5:344-63. [PMID: 26065494 PMCID: PMC4495376 DOI: 10.3390/metabo5020344] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2015] [Revised: 05/20/2015] [Accepted: 05/25/2015] [Indexed: 12/20/2022]  Open
8
Deveci M, Küçüktunç O, Eren K, Bozdağ D, Kaya K, Çatalyürek ÜV. Querying Co-regulated Genes on Diverse Gene Expression Datasets Via Biclustering. Methods Mol Biol 2015;1375:55-74. [PMID: 26626937 DOI: 10.1007/7651_2015_246] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
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