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Salgado Pardo JI, Navas González FJ, González Ariza A, León Jurado JM, Carolino N, Carolino I, Delgado Bermejo JV, Camacho Vallejo ME. Data-Mining Methodology to Improve the Scientific Production Quality in Turkey Meat and Carcass Characterization Studies. Animals (Basel) 2024; 14:2107. [PMID: 39061569 PMCID: PMC11273658 DOI: 10.3390/ani14142107] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2024] [Revised: 07/11/2024] [Accepted: 07/17/2024] [Indexed: 07/28/2024] Open
Abstract
The present research aims to describe how turkey meat and carcass quality traits define the interest of the scientific community through the quality standards of journals in which studies are published. To this end, an analysis of 92 research documents addressing the study of turkey carcass and meat quality over the last 57 years was performed. Meat and carcass quality attributes were dependent variables and included traits related to carcass dressing, muscle fiber, pH, colorimetry, water-holding capacity, texture, and chemical composition. The independent variables comprised publication quality traits, including journal indexation, database, journal impact factor (JIF), quartile, publication area, and JIF percentage. For each dependent variable, a data-mining chi-squared automatic interaction detection (CHAID) decision tree was developed. Carcass or piece yield was the only variable that did not show an impact on the publication quality. Moreover, color and pH measurements taken at 72 h postmortem showed a negative impact on publication interest. On the other hand, variables including water-retaining attributes, colorimetry, pH, chemical composition, and shear force traits stood out among the quality-enhancing variables due to their low inclusion in papers, while high standards improved power.
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Affiliation(s)
- José Ignacio Salgado Pardo
- Department of Genetics, Faculty of Veterinary Sciences, University of Córdoba, 14071 Córdoba, Spain; (J.I.S.P.); (F.J.N.G.); (J.V.D.B.)
| | - Francisco Javier Navas González
- Department of Genetics, Faculty of Veterinary Sciences, University of Córdoba, 14071 Córdoba, Spain; (J.I.S.P.); (F.J.N.G.); (J.V.D.B.)
| | | | | | - Nuno Carolino
- Centro de Investigação Vasco da Gama, Escola Universitária Vasco da Gama, 3020-210 Coimbra, Portugal; (N.C.); (I.C.)
- Instituto Nacional de Investigação Agrária e Veterinária, Polo de Inovação da Fonte Boa—Estação Zootécnica Nacional, 2005-424 Santarém, Portugal
- Centro de Investigação Interdisciplinar em Sanidade Animal, Faculdade de Medicina Veterinária, Universidade de Lisboa, 1300-477 Lisboa, Portugal
- Laboratório Associado para a Ciência Animal e Veterinária, Faculdade de Medicina Veterinária, Universidade de Lisboa, 1300-477 Lisboa, Portugal
| | - Inês Carolino
- Centro de Investigação Vasco da Gama, Escola Universitária Vasco da Gama, 3020-210 Coimbra, Portugal; (N.C.); (I.C.)
- Instituto Nacional de Investigação Agrária e Veterinária, Polo de Inovação da Fonte Boa—Estação Zootécnica Nacional, 2005-424 Santarém, Portugal
- Instituto Superior de Agronomia, Universidade de Lisboa, 1349-017 Lisboa, Portugal
| | - Juan Vicente Delgado Bermejo
- Department of Genetics, Faculty of Veterinary Sciences, University of Córdoba, 14071 Córdoba, Spain; (J.I.S.P.); (F.J.N.G.); (J.V.D.B.)
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Salgado Pardo JI, González Ariza A, Navas González FJ, León Jurado JM, Díaz Ruiz E, Delgado Bermejo JV, Camacho Vallejo ME. Discriminant canonical analysis as a tool for genotype traceability testing based on turkey meat and carcass traits. Front Vet Sci 2024; 11:1326519. [PMID: 38425837 PMCID: PMC10902079 DOI: 10.3389/fvets.2024.1326519] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2023] [Accepted: 01/24/2024] [Indexed: 03/02/2024] Open
Abstract
The present study aims to develop a statistical tool for turkey breed traceability testing based on meat and carcass quality characteristics. To this end, a comprehensive meta-analysis was performed, collecting data from a total of 75 studies approaching meat and carcass attributes of 37 turkey strains and landraces since the late 1960s. A total of 22 meat and carcass traits were considered variables, grouped in the following clusters: carcass dressing traits, muscle fiber properties, pH, colorimetry, water-capacity traits, texture-related attributes, and nutritional composition of the meat. Once the multicollinearity analysis allowed the deletion of redundant variables, cold carcass weight, slaughter weight, muscle fiber diameter, sex-female, carcass/piece weight, meat redness, ashes, pH24, meat lightness, moisture, fat, and water-holding capacity showed explanatory properties in the discriminating analysis (p < 0.05). In addition, strong positive and negative correlations were found among those variables studied. Carcass traits were positively associated, particularly slaughter weight and cold carcass weight (+0.561). Among meat physical traits, pH showed positive correlations with drip loss (+0.490) and pH24 (+0.327), and water-holding capacity was positively associated with cholesterol (+0.434) and negatively associated with collagen (-0.398). According to nutritional traits, fat and ash showed a strong correlation (+0.595), and both were negatively associated with moisture (-0.375 and -0.498, respectively). Strong negative correlations were found as well between meat protein and fat (-0.460) and between collagen and cholesterol (-0.654). Finally, the Mahalanobis distance suggested a clustering pattern based on meat and carcass characteristics that report information about interbreeding and variety proximity. This study establishes a departure point in the development of a tool for breed traceability guaranteeing aimed at enhancing distinguished, local breed-based turkey meat.
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Affiliation(s)
| | - Antonio González Ariza
- Department of Genetics, Faculty of Veterinary Sciences, University of Córdoba, Córdoba, Spain
- Agropecuary Provincial Centre, Diputación Provincial de Córdoba, Córdoba, Spain
| | | | | | - Esther Díaz Ruiz
- Department of Genetics, Faculty of Veterinary Sciences, University of Córdoba, Córdoba, Spain
| | | | - María Esperanza Camacho Vallejo
- Department of Agriculture and Ecological Husbandry, Area of Agriculture and Environment, Andalusian Institute of Agricultural and Fisheries Research and Training (IFAPA), Alameda del Obispo, Córdoba, Spain
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Salgado Pardo JI, Navas González FJ, González Ariza A, León Jurado JM, Galán Luque I, Delgado Bermejo JV, Camacho Vallejo ME. Study of Meat and Carcass Quality-Related Traits in Turkey Populations through Discriminant Canonical Analysis. Foods 2023; 12:3828. [PMID: 37893720 PMCID: PMC10606380 DOI: 10.3390/foods12203828] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2023] [Revised: 10/13/2023] [Accepted: 10/17/2023] [Indexed: 10/29/2023] Open
Abstract
The present research aimed to determine the main differences in meat and carcass quality traits among turkey genotypes worldwide and describe the clustering patterns through the use of a discriminant canonical analysis (DCA). To achieve this goal, a comprehensive meta-analysis of 75 documents discussing carcass and meat characteristics in the turkey species was performed. Meat and carcass attributes of nine different turkey populations were collected and grouped in terms of the following clusters: carcass dressing traits, muscle fiber properties, pH, color-related traits, water-retaining characteristics, texture-related traits, and meat chemical composition. The Bayesian ANOVA analysis reported that the majority of variables statistically differed (p < 0.05), and the multicollinearity analysis revealed the absence of redundancy problems among variables (VIF < 5). The DCA reported that cold carcass weight, slaughter weight, sex-male, carcass/piece weight, and the protein and fat composition of meat were the traits explaining variability among different turkey genotypes (Wilks' lambda: 0.488, 0.590, 0.905, 0.906, 0.937, and 0.944, respectively). The combination of traits in the first three dimensions explained 94.93% variability among groups. Mahalanobis distances cladogram-grouped populations following a cluster pattern and suggest its applicability as indicative of a turkey genotype's traceability.
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Affiliation(s)
- José Ignacio Salgado Pardo
- Department of Genetics, Faculty of Veterinary Sciences, University of Córdoba, 14071 Córdoba, Spain; (J.I.S.P.); (F.J.N.G.); (I.G.L.); (J.V.D.B.)
| | - Francisco Javier Navas González
- Department of Genetics, Faculty of Veterinary Sciences, University of Córdoba, 14071 Córdoba, Spain; (J.I.S.P.); (F.J.N.G.); (I.G.L.); (J.V.D.B.)
| | - Antonio González Ariza
- Department of Genetics, Faculty of Veterinary Sciences, University of Córdoba, 14071 Córdoba, Spain; (J.I.S.P.); (F.J.N.G.); (I.G.L.); (J.V.D.B.)
- Agropecuary Provincial Centre, Diputación Provincial de Córdoba, 14071 Córdoba, Spain;
| | | | - Inés Galán Luque
- Department of Genetics, Faculty of Veterinary Sciences, University of Córdoba, 14071 Córdoba, Spain; (J.I.S.P.); (F.J.N.G.); (I.G.L.); (J.V.D.B.)
| | - Juan Vicente Delgado Bermejo
- Department of Genetics, Faculty of Veterinary Sciences, University of Córdoba, 14071 Córdoba, Spain; (J.I.S.P.); (F.J.N.G.); (I.G.L.); (J.V.D.B.)
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Khoja IA, Arsalan A, Biswas AK, Tandon S. Casein zymography based detection and one step purification for simultaneous quantification of calcium induced endogenous proteases in breast and thigh muscles from different chicken breeds. J FOOD PROCESS PRES 2022. [DOI: 10.1111/jfpp.17129] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
Affiliation(s)
- I. A. Khoja
- Division of Post‐Harvest Technology, ICAR‐Indian Veterinary Research Institute, Izatnagar Bareilly U.P. India
| | - A. Arsalan
- Division of Livestock Products Technology, ICAR‐Indian Veterinary Research Institute, Izatnagar Bareilly U.P. India
| | - A. K. Biswas
- Division of Livestock Products Technology, ICAR‐Indian Veterinary Research Institute, Izatnagar Bareilly U.P. India
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Biswas AK, Kripriyalini L, Tandon S, Sharma D, Majumder S. Simultaneous Identification of Different Domains of Calpain from Blood and Turkey Meat Samples Using Casein Zymography. FOOD ANAL METHOD 2016. [DOI: 10.1007/s12161-016-0481-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Identification of different domains of calpain and calpastatin from chicken blood and their role in post-mortem aging of meat during holding at refrigeration temperatures. Food Chem 2016; 200:315-21. [DOI: 10.1016/j.foodchem.2016.01.031] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2015] [Revised: 12/19/2015] [Accepted: 01/08/2016] [Indexed: 11/17/2022]
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Li S, Xu X, Zhou G. The roles of the actin-myosin interaction and proteolysis in tenderization during the aging of chicken muscle. Poult Sci 2012; 91:150-60. [DOI: 10.3382/ps.2011-01484] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
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Zhang ZR, Jiang XS, Du HR, Li XC, Zhu Q, Liu YP. Tissue-Specific Expression of the Chicken Calpain2 Gene. Mol Biol Int 2010; 2010:373241. [PMID: 22110955 PMCID: PMC3218305 DOI: 10.4061/2010/373241] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2010] [Revised: 06/21/2010] [Accepted: 06/30/2010] [Indexed: 11/20/2022] Open
Abstract
We quantified chicken calpain 2 (CAPN2) expression in two Chinese chicken breeds (mountainous black-bone chicken breed [MB] and a commercial meat type chicken breed [S01]) to discern the tissue and ontogenic expression pattern and its effect on muscle metabolism. Real-time quantitative PCR assay was developed for accurate measurement of the CAPN2 mRNA expression in various tissues from chickens of different ages (0, 2, 4, 6, 8, 10, and 12 weeks). Results showed that the breast muscle and leg muscle tissues had the highest expression of CAPN2 compared to the other tissues from the same individual (P<.05). Overall, the CAPN2 mRNA level exhibited a “rise” developmental change in all tissues. The S01 chicken had a higher expression of the CAPN2 mRNA in all tissues than the MB chicken. Our results suggest that chicken CAPN2 expression may be related to chicken breeds and tissues.
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Affiliation(s)
- Zeng-Rong Zhang
- Institute of Poultry Sciences, Sichuan Animal Science Academy, Chengdu, Sichuan 610066, China
- Breeding Center, College of Animal Science and Technology, Sichuan Agricultural University, Ya'an, Sichuan 625014, China
| | - Xiao-Song Jiang
- Institute of Poultry Sciences, Sichuan Animal Science Academy, Chengdu, Sichuan 610066, China
| | - Hua-Rui Du
- Institute of Poultry Sciences, Sichuan Animal Science Academy, Chengdu, Sichuan 610066, China
| | - Xiao-Cheng Li
- Sichuan Dahen Poultry Breeding Company, Chengdu, Sichuan 610066, China
| | - Qing Zhu
- Breeding Center, College of Animal Science and Technology, Sichuan Agricultural University, Ya'an, Sichuan 625014, China
| | - Yi-Ping Liu
- Breeding Center, College of Animal Science and Technology, Sichuan Agricultural University, Ya'an, Sichuan 625014, China
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Lee H, Santé-Lhoutellier V, Vigouroux S, Briand Y, Briand M. Role of Calpains in Postmortem Proteolysis in Chicken Muscle. Poult Sci 2008; 87:2126-32. [DOI: 10.3382/ps.2007-00296] [Citation(s) in RCA: 50] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
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