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Pirkkanen J, Laframboise T, Peterson J, Labelle A, Mahoney F, Lapointe M, Mendonca MS, Tai TC, Lees SJ, Tharmalingam S, Boreham DR, Thome C. The Role of Natural Background Radiation in Maintaining Genomic Stability in the CGL1 Human Hybrid Model System. Radiat Res 2024; 202:617-625. [PMID: 39134062 DOI: 10.1667/rade-23-00243.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2023] [Accepted: 06/26/2024] [Indexed: 10/09/2024]
Abstract
Natural background ionizing radiation is present on the earth's surface; however, the biological role of this chronic low-dose-rate exposure remains unknown. The Researching the Effects of the Presence and Absence of Ionizing Radiation (REPAIR) project is examining the impacts of sub-natural background radiation exposure through experiments conducted 2 km underground in SNOLAB. The rock overburden combined with experiment-specific shielding provides a background radiation dose rate 30 times lower than on the surface. We hypothesize that natural background radiation is essential for life and maintains genomic stability and that prolonged exposure to sub-background environments will be detrimental to biological systems. To evaluate this, human hybrid CGL1 cells were continuously cultured in SNOLAB and our surface control laboratory for 16 weeks. Cells were assayed every 4 weeks for growth rate, alkaline phosphatase (ALP) activity (a marker of cellular transformation in the CGL1 system), and the expression of genes related to DNA damage and cell cycle regulation. A subset of cells was also exposed to a challenge radiation dose (0.1 to 8 Gy of X rays) and assayed for clonogenic survival and DNA double-strand break induction to examine if prolonged sub-background exposure alters the cellular response to high-dose irradiation. At each 4-week time point, sub-background radiation exposure did not significantly alter cell growth rates, survival, DNA damage, or gene expression. However, cells cultured in SNOLAB showed significantly higher ALP activity, a marker of carcinogenesis in these cells, which increased with longer exposure to the sub-background environment, indicative of neoplastic progression. Overall, these data suggest that sub-background radiation exposure does not impact growth, survival, or DNA damage in CGL1 cells but may lead to increased rates of neoplastic transformation, highlighting a potentially important role for natural background radiation in maintaining normal cellular function and genomic stability.
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Affiliation(s)
- Jake Pirkkanen
- School of Natural Sciences, Laurentian University, Sudbury, Ontario, Canada
| | - Taylor Laframboise
- School of Natural Sciences, Laurentian University, Sudbury, Ontario, Canada
| | - Jayden Peterson
- School of Natural Sciences, Laurentian University, Sudbury, Ontario, Canada
| | - Alyssa Labelle
- School of Natural Sciences, Laurentian University, Sudbury, Ontario, Canada
| | - Forest Mahoney
- School of Natural Sciences, Laurentian University, Sudbury, Ontario, Canada
| | - Michel Lapointe
- School of Natural Sciences, Laurentian University, Sudbury, Ontario, Canada
| | - Marc S Mendonca
- Department of Radiation Oncology, Radiation and Cancer Biology Laboratories, and Department of Medical & Molecular Genetics, Indiana University School of Medicine, Indianapolis, Indiana
| | - T C Tai
- School of Natural Sciences, Laurentian University, Sudbury, Ontario, Canada
- Medical Sciences Division, Northern Ontario School of Medicine University, Sudbury, Ontario, Canada
| | - Simon J Lees
- Medical Sciences Division, Northern Ontario School of Medicine University, Sudbury, Ontario, Canada
| | - Sujeenthar Tharmalingam
- School of Natural Sciences, Laurentian University, Sudbury, Ontario, Canada
- Medical Sciences Division, Northern Ontario School of Medicine University, Sudbury, Ontario, Canada
- Health Sciences North Research Institute, Sudbury, Ontario, Canada
| | - Douglas R Boreham
- School of Natural Sciences, Laurentian University, Sudbury, Ontario, Canada
- Medical Sciences Division, Northern Ontario School of Medicine University, Sudbury, Ontario, Canada
| | - Christopher Thome
- School of Natural Sciences, Laurentian University, Sudbury, Ontario, Canada
- Medical Sciences Division, Northern Ontario School of Medicine University, Sudbury, Ontario, Canada
- Health Sciences North Research Institute, Sudbury, Ontario, Canada
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Lapointe MR, Laframboise T, Pirkkanen J, Tai TC, Lees SJ, Santa Maria SR, Tharmalingam S, Boreham DR, Thome C. Protracted Exposure to a Sub-background Radiation Environment Negatively Impacts the Anhydrobiotic Recovery of Desiccated Yeast Sentinels. HEALTH PHYSICS 2024; 126:397-404. [PMID: 38568172 DOI: 10.1097/hp.0000000000001804] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/26/2024]
Abstract
ABSTRACT Experiments that examine the impacts of subnatural background radiation exposure provide a unique approach to studying the biological effects of low-dose radiation. These experiments often need to be conducted in deep underground laboratories in order to filter surface-level cosmic radiation. This presents some logistical challenges in experimental design and necessitates a model organism with minimal maintenance. As such, desiccated yeast ( Saccharomyces cerevisiae ) is an ideal model system for these investigations. This study aimed to determine the impact of prolonged sub-background radiation exposure in anhydrobiotic (desiccated) yeast at SNOLAB in Sudbury, Ontario, Canada. Two yeast strains were used: a normal wild type and an isogenic recombinational repair-deficient rad51 knockout strain ( rad51 Δ). Desiccated yeast samples were stored in the normal background surface control laboratory (68.0 nGy h -1 ) and in the sub-background environment within SNOLAB (10.1 nGy h -1 ) for up to 48 wk. Post-rehydration survival, growth rate, and metabolic activity were assessed at multiple time points. Survival in the sub-background environment was significantly reduced by a factor of 1.39 and 2.67 in the wild type and rad51 ∆ strains, respectively. Post-rehydration metabolic activity measured via alamarBlue reduction remained unchanged in the wild type strain but was 26% lower in the sub-background rad51 ∆ strain. These results demonstrate that removing natural background radiation negatively impacts the survival and metabolism of desiccated yeast, highlighting the potential importance of natural radiation exposure in maintaining homeostasis of living organisms.
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Affiliation(s)
| | | | | | | | - Simon J Lees
- Medical Sciences Division, NOSM University, Sudbury, Ontario, Canada
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Zou Y, Wang L, Wen J, Cheng J, Li C, Hao Z, Zou J, Gao M, Li W, Wu J, Xie H, Liu J. Progress in biological and medical research in the deep underground: an update. Front Public Health 2023; 11:1249742. [PMID: 37637794 PMCID: PMC10447979 DOI: 10.3389/fpubh.2023.1249742] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2023] [Accepted: 07/31/2023] [Indexed: 08/29/2023] Open
Abstract
As the growing population of individuals residing or working in deep underground spaces for prolonged periods, it has become imperative to understand the influence of factors in the deep underground environment (DUGE) on living systems. Heping Xie has conceptualized the concept of deep underground medicine to identify factors in the DUGE that can have either detrimental or beneficial effects on human health. Over the past few years, an increasing number of studies have explored the molecular mechanisms that underlie the biological impacts of factors in the DUGE on model organisms and humans. Here, we present a summary of the present landscape of biological and medical research conducted in deep underground laboratories and propose promising avenues for future investigations in this field. Most research demonstrates that low background radiation can trigger a stress response and affect the growth, organelles, oxidative stress, defense capacity, and metabolism of cells. Studies show that residing and/or working in the DUGE has detrimental effects on human health. Employees working in deep mines suffer from intense discomfort caused by high temperature and humidity, which increase with depth, and experience fatigue and sleep disturbance. The negative impacts of the DUGE on human health may be induced by changes in the metabolism of specific amino acids; however, the cellular pathways remain to be elucidated. Biological and medical research must continue in deep underground laboratories and mines to guarantee the safe probing of uncharted depths as humans utilize the deep underground space.
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Affiliation(s)
- Yuhao Zou
- Department of Otolaryngology Head and Neck Surgery, West China Hospital, Sichuan University, Chengdu, China
- Deep Underground Space Medical Center, West China Hospital, Sichuan University, Chengdu, China
| | - Ling Wang
- Deep Underground Space Medical Center, West China Hospital, Sichuan University, Chengdu, China
| | - Jirui Wen
- Deep Underground Space Medical Center, West China Hospital, Sichuan University, Chengdu, China
| | - Juan Cheng
- Deep Underground Space Medical Center, West China Hospital, Sichuan University, Chengdu, China
| | - Can Li
- Deep Underground Space Medical Center, West China Hospital, Sichuan University, Chengdu, China
| | - Zhizhen Hao
- Department of Otolaryngology Head and Neck Surgery, West China Hospital, Sichuan University, Chengdu, China
- Deep Underground Space Medical Center, West China Hospital, Sichuan University, Chengdu, China
| | - Jian Zou
- Department of Otolaryngology Head and Neck Surgery, West China Hospital, Sichuan University, Chengdu, China
- Deep Underground Space Medical Center, West China Hospital, Sichuan University, Chengdu, China
| | - Mingzhong Gao
- College of Water Resources and Hydropower, Sichuan University, Chengdu, China
- Institute of Deep Earth Science and Green Energy, Shenzhen University, Shenzhen, China
| | - Weimin Li
- West China Hospital, Sichuan University, Chengdu, China
| | - Jiang Wu
- Deep Underground Space Medical Center, West China Hospital, Sichuan University, Chengdu, China
| | - Heping Xie
- College of Water Resources and Hydropower, Sichuan University, Chengdu, China
- Institute of Deep Earth Science and Green Energy, Shenzhen University, Shenzhen, China
| | - Jifeng Liu
- Department of Otolaryngology Head and Neck Surgery, West China Hospital, Sichuan University, Chengdu, China
- Deep Underground Space Medical Center, West China Hospital, Sichuan University, Chengdu, China
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Pirkkanen J, Lalonde C, Lapointe M, Laframboise T, Mendonca MS, Boreham DR, Tharmalingam S, Thome C. The REPAIR Project, a Deep-Underground Radiobiology Experiment Investigating the Biological Effects of Natural Background Radiation: The First 6 Years. Radiat Res 2023; 199:290-293. [PMID: 36745561 DOI: 10.1667/rade-22-00193.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2022] [Accepted: 01/17/2023] [Indexed: 02/07/2023]
Abstract
In 2017, a special edition of Radiation Research was published [Oct; Vol. 188 4.2 (https://bioone.org/journals/radiation-research/volume-188/issue-4.2)] which focused on a recently established radiobiology project within SNOLAB, a unique deep-underground research facility. This special edition included original articles, reviews and commentaries relevant to the research goals of this new project which was titled Researching the Effects of the Presence and Absence of Ionizing Radiation (REPAIR). These research goals were founded in understanding the biological effects of terrestrial and cosmic natural background radiation (NBR). Since 2017, REPAIR has evolved into a sub-NBR radiobiology research program which investigates these effects using multiple model systems and various biological endpoints. This paper summarizes the evolution of the REPAIR project over the first 6-years including its experimental scope and capabilities as well as research accomplishments.
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Affiliation(s)
- Jake Pirkkanen
- School of Natural Sciences, Laurentian University, Sudbury, Ontario, P3E 2C6, Canada
| | - Christine Lalonde
- School of Natural Sciences, Laurentian University, Sudbury, Ontario, P3E 2C6, Canada
| | - Michel Lapointe
- School of Natural Sciences, Laurentian University, Sudbury, Ontario, P3E 2C6, Canada
| | - Taylor Laframboise
- School of Natural Sciences, Laurentian University, Sudbury, Ontario, P3E 2C6, Canada
| | - Marc S Mendonca
- Department of Radiation Oncology, Radiation and Cancer Biology Laboratories, and Department of Medical & Molecular Genetics, Indiana University School of Medicine, Indianapolis, Indiana 46202
| | - Douglas R Boreham
- School of Natural Sciences, Laurentian University, Sudbury, Ontario, P3E 2C6, Canada.,Medical Sciences Division, Northern Ontario School of Medicine (NOSM University), Sudbury, Ontario, P3E 2C6, Canada.,Nuclear Innovation Institute, Port Elgin, Ontario, N0H 2C0, Canada
| | - Sujeenthar Tharmalingam
- School of Natural Sciences, Laurentian University, Sudbury, Ontario, P3E 2C6, Canada.,Medical Sciences Division, Northern Ontario School of Medicine (NOSM University), Sudbury, Ontario, P3E 2C6, Canada.,Nuclear Innovation Institute, Port Elgin, Ontario, N0H 2C0, Canada
| | - Christopher Thome
- School of Natural Sciences, Laurentian University, Sudbury, Ontario, P3E 2C6, Canada.,Medical Sciences Division, Northern Ontario School of Medicine (NOSM University), Sudbury, Ontario, P3E 2C6, Canada.,Nuclear Innovation Institute, Port Elgin, Ontario, N0H 2C0, Canada
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Wen Q, Zhou J, Sun X, Ma T, Liu Y, Xie Y, Wang L, Cheng J, Wen J, Wu J, Zou J, Liu S, Liu J. Urine metabolomics analysis of sleep quality in deep-underground miners: A pilot study. Front Public Health 2022; 10:969113. [PMID: 36062104 PMCID: PMC9437423 DOI: 10.3389/fpubh.2022.969113] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2022] [Accepted: 08/01/2022] [Indexed: 01/25/2023] Open
Abstract
Background In previous questionnaire surveys of miners, sleep disorders were found among underground workers. The influence of the special deep-underground environment and its potential mechanism are still unclear. Therefore, this study intends to utilize LC-MS metabolomics to study the potential differences between different environments and different sleep qualities. Methods Twenty-seven miners working at 645-1,500 m deep wells were investigated in this study, and 12 local ground volunteers were recruited as the control group. The Pittsburgh Sleep Quality Index (PSQI) was used to examine and evaluate the sleep status of the subjects in the past month, and valuable basic information about the participants was collected. PSQI scores were obtained according to specific calculation rules, and the corresponding sleep grouping and subsequent analysis were carried out. Through liquid chromatography-mass spectrometry (LC-MS) non-targeted metabolomics analysis, differences in metabolism were found by bioinformatics analysis in different environments. Results Between the deep-underground and ground (DUvsG) group, 316 differential metabolites were identified and 125 differential metabolites were identified in the good sleep quality vs. poor sleep quality (GSQvsPSQ) group. The metabolic pathways of Phenylalanine, tyrosine and tryptophan biosynthesis (p = 0.0102) and D-Glutamine and D-glutamate metabolism (p = 0.0241) were significantly enriched in DUvsG. For GSQvsPSQ group, Butanoate metabolism was statistically significant (p = 0.0276). L-Phenylalanine, L-Tyrosine and L-Glutamine were highly expressed in the deep-underground group. Acetoacetic acid was poorly expressed, and 2-hydroxyglutaric acid was highly expressed in good sleep quality. Conclusions The influence of the underground environment on the human body is more likely to induce specific amino acid metabolism processes, and regulate the sleep-wake state by promoting the production of excitatory neurotransmitters. The difference in sleep quality may be related to the enhancement of glycolytic metabolism, the increase in excitatory neurotransmitters and the activation of proinflammation. L-phenylalanine, L-tyrosine and L-glutamine, Acetoacetic acid and 2-hydroxyglutaric acid may be potential biomarkers correspondingly.
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Affiliation(s)
- Qiao Wen
- Department of Otolaryngology Head and Neck Surgery, West China Hospital, Sichuan University, Chengdu, China,Deep Underground Space Medical Center, West China Hospital, Sichuan University, Chengdu, China
| | - Jing Zhou
- Department of Otolaryngology Head and Neck Surgery, West China Hospital, Sichuan University, Chengdu, China,Deep Underground Space Medical Center, West China Hospital, Sichuan University, Chengdu, China
| | - Xiaoru Sun
- Department of Otolaryngology Head and Neck Surgery, West China Hospital, Sichuan University, Chengdu, China,Deep Underground Space Medical Center, West China Hospital, Sichuan University, Chengdu, China
| | - Tengfei Ma
- Department of Otolaryngology Head and Neck Surgery, West China Hospital, Sichuan University, Chengdu, China,Deep Underground Space Medical Center, West China Hospital, Sichuan University, Chengdu, China
| | - Yilin Liu
- Deep Underground Space Medical Center, West China Hospital, Sichuan University, Chengdu, China,Department of Ophthalmology, West China Hospital, Sichuan University, Chengdu, China
| | - Yike Xie
- Deep Underground Space Medical Center, West China Hospital, Sichuan University, Chengdu, China
| | - Ling Wang
- Deep Underground Space Medical Center, West China Hospital, Sichuan University, Chengdu, China
| | - Juan Cheng
- Deep Underground Space Medical Center, West China Hospital, Sichuan University, Chengdu, China
| | - Jirui Wen
- Deep Underground Space Medical Center, West China Hospital, Sichuan University, Chengdu, China
| | - Jiang Wu
- Deep Underground Space Medical Center, West China Hospital, Sichuan University, Chengdu, China
| | - Jian Zou
- Department of Otolaryngology Head and Neck Surgery, West China Hospital, Sichuan University, Chengdu, China,Deep Underground Space Medical Center, West China Hospital, Sichuan University, Chengdu, China
| | - Shixi Liu
- Department of Otolaryngology Head and Neck Surgery, West China Hospital, Sichuan University, Chengdu, China,Deep Underground Space Medical Center, West China Hospital, Sichuan University, Chengdu, China,Shixi Liu
| | - Jifeng Liu
- Department of Otolaryngology Head and Neck Surgery, West China Hospital, Sichuan University, Chengdu, China,Deep Underground Space Medical Center, West China Hospital, Sichuan University, Chengdu, China,*Correspondence: Jifeng Liu
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