Control of Soilborne Pathogens of Zingiber officinale by Methyl Iodide and Chloropicrin in China

Impact of biocontrol microbes on soil microbial diversity in ginger (Zingiber officinale Roscoe)

BACKGROUND

Bacteria are the most diverse and abundant group of soil organisms that influence plant growth and health. Bacillus and Trichoderma are commonly used as biological control agents (BCA) that directly or indirectly act on soil bacteria. Therefore, it is essential to understand how the applied microbes impact the indigenous microbial community before exploring their activity in the control of soilborne diseases.

RESULTS

MiSeq sequencing of the 16S rRNA gene was used to decipher the shift of rhizosphere bacterial community in ginger (Zingiber officinale Roscoe) treated with Bacillus subtilus and Trichoderma harzianum at different concentrations. The dominant phyla in treated and nontreated samples were Proteobacteria, Actinobacteria, Acidobacteria and comprised up to 54.7% of the total sequences. There were significant differences between BCA treated and nontreated samples in the bacteria community. BCA treated plants presented higher bacterial diversity than nontreated and higher dosage of BCA had a larger impact on rhizosphere microbiota, but the 'dose-response relationship' varied in different bacterial groups. Potential biomarkers at genus level were found, such as RB41, Pseudomonas, Nitrospira, Candidatus_Udaeobacter.

CONCLUSION

The combined use of Bacillus subtilus and Trichoderma harzianum could alter bacterial community structure and diversity in rhizosphere soil. BCA-microbes interactions as well as soil microbial ecology should be noticed in plant disease management. © 2021 Society of Chemical Industry.

Assessment of the potential of a reduced dose of dimethyl disulfide plus metham sodium on soilborne pests and cucumber growth

Methyl bromide (MB), a dominant ozone-depleting substance, is scheduled to be completely phased out for soil fumigation by December 30th 2018, in China. The combined effects of dimethyl disulfide (DMDS) plus metham sodium (MNa) were assessed in controlling soilborne pests for soil fumigation. A study was designed in laboratory for the evaluation of the efficacy of DMDS + MNa to control major soilborne pests. At the same time, two trials were conducted in cucumber field located in Tongzhou (in 2012) and Shunyi (in 2013), respectively, in order to assess the potential of DMDS + MNa in controlling soilborne pests. Laboratory studies disclosed positive synergistic effects of almost all four used combinations on Meloidogyne spp., Fusarium spp., Phytophthora spp., Abutilon theophrasti and Digitaria sanguinalis. Field trials found that DMDS + MNa (30 + 21 g a. i. m-2), both at a 50% reduced dose, effectively suppressed Meloidogyne spp. with a low root galling index (2.1% and 11.7%), significantly reduced the levels of Phytophthora and Fusarium spp. with a low root disease index (7.5% and 15.8%), gave very high cucumber yields (6.75 kg m-2 and 10.03 kg m-2), and increased income for cucumber growers with the highest economic benefits (20.91 ¥ m-2 and 23.58 ¥ m-2). The combination treatment provided similar results as MB standard dose treatment (40 g a. i. m-2) or DMDS standard dose treatment (60 g a. i. m-2) in pest control and yield, but was more effective than MNa standard dose treatment (42 g a. i. m-2). Usage of all chemical treatments gave better significant results than the untreated group of control. Considering the economic benefits, the DMDS plus MNa combination (30 + 21 g a. i. m-2) could be used for soil fumigation in cucumber production in China.

Legacy effects of continuous chloropicrin-fumigation for 3-years on soil microbial community composition and metabolic activity

Chloropicrin is widely used to control ginger wilt in China, which have an enormous impact on soil microbial diversity. However, little is known on the possible legacy effects on soil microbial community composition with continuous fumigation over different years. In this report, we used high throughput Illumina sequencing and Biolog ECO microplates to determine the bacterial community and microbial metabolic activity in ginger harvest fields of non-fumigation (NF), chloropicrin-fumigation for 1 year (F_1) and continuous chloropicrin-fumigation for 3 years (F_3). The results showed that microbial richness and diversity in F_3 were the lowest, while the metabolic activity had no significant difference. With the increase of fumigation years, the incidence of bacterial wilt was decreased, the relative abundance of Actinobacteria and Saccharibacteria were gradually increased. Using LEfSe analyses, we found that Saccharibacteria was the most prominent biomarker in F_3. Eight genera associated with antibiotic production in F_3 were screened out, of which seven belonged to Actinobacteria, and one belonged to Bacteroidetes. The study indicated that with the increase of fumigation years, soil antibacterial capacity may be increased (possible reason for reduced the incidence of bacterial wilt), and Saccharibacteria played a potential role in evaluating the biological effects of continuous fumigation.

Analysis of the inhibitory effects of chloropicrin fumigation on nitrification in various soil types

Chloropicrin retards the conversion of ammonia to nitrite during the nitrification process in soil. In our study, the dynamic effect of chloropicrin fumigation on soil nitrification was evaluated in five different soil types to identify relationships between soil properties and the effect of fumigation on nitrification. Chloropicrin significantly inhibited nitrification in all soils; however, the recovery of nitrification varied greatly between the soils. Following chloropicrin fumigation, nitrification recovered to the control level in all soils, except in the acidic Guangxi soil. Nitrification recovered faster in fumigated sandy loam Beijing soil than in the other four fumigated soils. Soil texture and pH were two important factors that influenced chloropicrin's inhibitory effect on nitrification. An S-shaped function was fitted to soil NO₃^--N content to assess the nitrification recovery tendency in different soils. The time taken to reach maximum nitrification (t_max) ranged from 2.4 to 3.0 weeks in all unfumigated soils. Results demonstrated that t_max was greater in all fumigated soils than in untreated soils. Correlation calculations showed that t_max was strongly correlated to soil texture. The correlation analysis results indicated that the recovery rate of nitrification after chloropicrin fumigation is much faster in sandy loam soil than silty loam soil.