Fruit Rots of Pumpkin: A Serious Threat to the Pumpkin Industry

Morphology, Molecular Identification, and Pathogenicity of Two Novel Fusarium Species Associated with Postharvest Fruit Rot of Cucurbits in Northern Thailand

Fruit rot of cucurbits caused by several pathogenic fungi has become an important postharvest disease worldwide. In 2022, fruit rot on watermelon (Citrullus lanatus) and muskmelon (Cucumis melo) was observed during the postharvest storage phase in the Chiang Mai and Phitsanulok Provinces of northern Thailand. These diseases can lead to significant economic losses. This present study was conducted to isolate the causal agent of fungi in lesions of fruit rot. A total of four fungal isolates were obtained, of which two isolates (SDBR-CMU422 and SDBR-CMU423) were obtained from rot lesions of watermelons, while the remaining isolates (SDBR-CMU424 and SDBR-CMU425) were obtained from rot lesions of muskmelons. All fungal isolates were identified using both morphological characteristics and molecular analyses. Morphologically, all isolated fungal isolates were classified into the genus Fusarium. Multi-gene phylogenetic analyses of a combination of the translation elongation factor 1-alpha (tef-1), calmodulin (cam), and RNA polymerase second largest subunit (rpb2) genes reveled that four fungal isolates belonged to the Fusarium incarnatum-equiseti species complex and were distinct from all other known species. Thus, we have described them as two new species, namely F. citrullicola (SDBR-CMU422 and SDBR-CMU423) and F. melonis (SDBR-CMU424 and SDBR-CMU425). A full description, illustrations, and a phylogenetic tree indicating the position of both new species have been provided. Moreover, pathogenicity tests were subsequently performed and the results showed that F. citrullicola and F. melonis caused symptoms of fruit rot on inoculated watermelon and muskmelon fruits, respectively. Notably, this outcome was indicative of the symptoms that appeared during the postharvest storage phase. To our knowledge, two new pathogenic fungi, F. citrullicola and F. melonis, are new causal agents of watermelon and muskmelon fruit rot, respectively. Importantly, these findings provide valuable information for the development of effective strategies for the monitoring and prevention of these diseases.

Broad Resistance to Post-Harvest Fruit Rot in USVL Watermelon Germplasm Lines to Isolates of Phytophthora capsici Across the United States

Watermelon is an important cucurbit vegetable crop grown in most of the United States. Phytophthora fruit rot of watermelon caused by Phytophthora capsici has been a major factor, limiting production for the past 15 years in the southeastern United States. The U.S. Department of Agriculture, Agricultural Research Service released five Phytophthora fruit rot-resistant germplasm lines for use in breeding programs. These lines were developed by phenotyping using a local isolate of P. capsici from South Carolina. The present study was undertaken to determine if these resistant lines had broad resistance to diverse P. capsici isolates collected from different states and crops. Five resistant germplasm lines (USVL020-PFR, USVL203-PFR, USVL782-PFR, USVL489-PFR, and USVL531-MDR) and two susceptible cultivars, Sugar Baby and Mickey Lee, used as checks were grown in a field in 2014 and 2015 to produce fruit for evaluation. Mature fruit were harvested and placed in a walk-in growth chamber and inoculated with 20 different P. capsici isolates. The chamber was maintained at 26 ± 2°C and high relative humidity (>95%) using a humidifier. All five resistant germplasm lines were significantly more resistant than the two susceptible checks to all 20 P. capsici isolates. Among the five resistant germplasm lines, USVL020-PFR, USVL782-PFR, and USVL531-MDR had broad resistance. Some P. capsici isolates induced minor lesions and rot on USVL489-PFR compared with the other resistant lines. Variation in virulence and genetic diversity among the 20 P. capsici isolates was also observed. The five watermelon germplasm lines will be useful for developing commercial watermelon cultivars with broad resistance to P. capsici.

Characteristics of Xanthomonas cucurbitae Isolates from Pumpkins and Survival of the Bacterium in Pumpkin Seeds

This study was conducted to determine characteristics of Xanthomonas cucurbitae, the causal agent of bacterial spot of pumpkin, and survival of the bacterium in pumpkin seeds. Fourteen X. cucurbitae isolates from the north central region of the United States, along with the X. cucurbitae strain 23378 from the American Type Culture Collection, were included in this study. The range of minimum, optimum, and maximum temperatures for colony development of X. cucurbitae were 4 to 6°C, 24 to 30°C, and 34 to 36°C, respectively. Optimum pH for colony development ranged from 6.5 to 8.0. Leaves of 3-week-old pumpkins 'Howden' and 'Dickinson' were inoculated with X. cucurbitae isolates (10⁸ CFU/ml). There was a significant difference in the postinoculation periods for appearance of bacterial lesions on the leaves among the isolates; however, there was no significant difference in diameters of the lesions on each of the pumpkin cultivar 7 days after inoculation. Four of the isolates caused significantly larger lesions on 'Dickinson' leaves than 'Howden' leaves. Naturally infected 'Howden' pumpkin and inoculated 'Dickinson' pumpkin seeds with X. cucurbitae were stored at 4 and 22°C. X. cucurbitae was isolated from both naturally infected and inoculated seeds 24 months after storage at both 4 and 22°C, and the isolated bacteria were pathogenic.

Development of Phytophthora Fruit Rot Caused by Phytophthora capsici on Resistant and Susceptible Watermelon Fruit of Different Ages

Watermelon is an important crop grown in 44 states in the United States. Phytophthora fruit rot caused by Phytophthora capsici is a serious disease in the southeastern U.S.A., where over 50% of the watermelons are produced. The disease has resulted in severe losses to watermelon growers, especially in Georgia, South Carolina, and North Carolina during the past few years. Several fruit rot-resistant watermelon germplasm lines have been developed for use in breeding programs. To evaluate the development of Phytophthora fruit rot on fruit of different ages, plants of fruit rot-resistant and susceptible lines were planted at weekly intervals for five consecutive weeks in experiments conducted over three years (2011 to 2013). Flowers were routinely inspected and hand pollinated to ensure having fruit of different ages. In each year, different aged fruit were harvested on the same day and inoculated with a 5-mm agar plug from an actively growing colony of P. capsici. Inoculated fruit were maintained in a room set to conditions conducive for disease development (>95% relative humidity, 26 ± 2°C). After 5 days, lesion diameter and intensity of sporulation was recorded for each fruit. Lesion diameter and sporulation intensity were significantly greater on fruit of susceptible lines compared with resistant lines. Fruit age did not have an effect on either measurement on susceptible (Sugar Baby) or resistant lines (PI 560020 and PI 595203). Our results showed that resistance to Phytophthora fruit rot in watermelon was not correlated with fruit age.

Occurrence of Bacterial Spot on Pumpkin and Squash Fruit in the North Central Region of the United States and Bacteria Associated with the Spots

Since 2006, a bacterial spot disease has been widely observed on pumpkin and squash fruit in the North Central region (NCR) of the United States. Surveys were conducted during 2011 to 2013 to determine the occurrence of the disease on pumpkin and winter squash in the NCR. In each state, at least five commercial pumpkin and squash fields were visited each year within 3 weeks of harvest, and 60 fruit were inspected in each field. In nine states surveyed, 217 of 245 fields had fruit with bacterial spot. The average incidence of the symptomatic fruit in all pumpkin fields surveyed was 27.1, 30.3, and 25.3% in 2011, 2012, and 2013, respectively. The average incidence of fruit with bacterial spot in all squash fields surveyed was 20.2% in 2012 and 16.9% in 2013. The incidence of symptomatic fruit was more than 90% in some fields. Xanthomonas cucurbitae and non-X. cucurbitae bacteria were isolated from all of the symptomatic fruit collected. X. cucurbitae was identified based on colony characteristics on yeast extract-dextrose-CaCO₃ agar, a polymerase chain reaction test using primers RST2 and RST3, and pathogenicity on pumpkin leaves. All X. cucurbitae isolates tested were pathogenic on 'Howden' pumpkin. In total, 312 non-X. cucurbitae isolates were identified into 10 genera based on the restriction fragment length polymorphism analysis. None of the non-X. cucurbitae isolates was pathogenic on Howden. In vitro studies of interactions between non-X. cucurbitae and X. cucurbitae showed that Pantoea isolates had antagonistic activity against X. cucurbitae. Identified Pantoea agglomerans showed the highest antagonistic activity against X. cucurbitae.

Compositional Variability and Antifungal Potentials of Ocimum basilicum, O. tenuiflorum, O. gratissimum and O. kilimandscharicum Essential Oils against Rhizoctonia solani and Choanephora cucurbitarum

The composition of hydrodistilled essential oils of Ocimum basilicum L. (four chemovariants), O. tenuiflorum L., O. gratissimum L., and O. kilimandscharicum Guerke were analyzed and compared by using capillary gas chromatography (GC/FID) and GC-mass spectrometry (GC/MS). Phenyl propanoids (upto 87.0%) and monoterpenoids (upto 83.3%) were prevalent constituents distributed in the studied Ocimum taxa. The major constituents of the four distinct chemovariants of O. basilicum were methyl chavicol (86.3%), methyl chavicol (61.5%)/linalool (28.6%), citral (65.9%); and linalool (36.1%)/citral (28.8%). Eugenol (66.5% and 78.0%) was the major constituent of O. tenuiflorum and O. gratissimum. Eugenol (34.0%), β-bisabolene (15.4%), ( E)-α-bisabolene (10.9%), methyl chavicol (10.2%) and 1,8-cineole (8.2%) were the major constituents of O. kilimandscharicum. In order to explore the potential for industrial use, the extracted essential oils were assessed for their antifungal potential through poison food technique against two phytopathogens, Rhizoctonia solani and Choanephora cucurbitarum, which cause root and wet rot diseases in various crops. O. tenuiflorum, O. gratissimum, and O. kilimandscharicum exhibited complete growth inhibition against R. solani and C. cucurbitarum after 24 and 48 h of treatment. O. basilicum chemotypes showed variable levels of growth inhibition (63.0%–100%) against these two phytopathogens.

Survival of Oospores of Phytophthora capsici in Soil

This study assessed survival of Phytophthora capsici oospores in soil in Illinois. Soils differing in texture and other characteristics were collected from four Illinois Counties (Champaign, Gallatin, Madison, and Tazewell), equilibrated to -0.3 MPa, and infested with oospores of P. capsici at a density of 5 × 10³ oospores/g of dry soil. Samples (25 g) of the infested soil were placed in 15-μm mesh polyester bags, which were sealed and placed at 2-, 10-, and 25-cm depths in 15.3-cm-diameter PVC tubes containing the same field soil as the infested bags. Tubes were buried vertically in the ground at the University of Illinois Vegetable Research Farm in Champaign in October 2004. Soil samples were assayed for recovery and germination of oospores 1 day and 3, 6, 12, 24, 30, 36, and 48 months after incorporation of oospores into the soil. Overall, the percentage of oospore recovery and the percentage of germination of oospores were not affected significantly by soil source and burial depth but both the oospore recovery and oospore germination were significantly (P = 0.001) affected by the duration of oospore burial. The rate of oospore recovery from soil samples was 61.06, 16.69, 10.28, 1.05, 0.30, 0.06, 0.05, and 0.004% after 1 day and 3, 6, 12, 24, 30, 36, and 48 months, respectively, following incorporation of oospores into the soil; and mean oospore germination was 47.17, 30.53, 21.33, 15.64, 7.42, 2.67, 2.61, and 0.00%, respectively. Survival of P. capsici oospores was compared in soil samples stored in a laboratory at 22°C versus on the soil surface or buried 2, 10, or 25 cm deep in a field. Oospores were recovered 1, 3, 6, 12, and 24 months after incorporation for both storage locations. The percentage of oospores recovered from samples stored in the laboratory was significantly (P = 0.004) greater than recovery from samples stored in the field, regardless of the depth of burial. Twenty-four months after incorporation of oospores, 26.52% of oospores were recovered from soil samples in the laboratory, whereas only 0.12% of oospores were recovered from soil samples in the field. Overall, the percentages of germination of oospores recovered from samples in the laboratory and field over 24 months were not significantly different. In both experiments, germinated oospores produced mycelia, sporangia, and zoospores, and were virulent on 'California Wonder' bell pepper. This study showed that oospores of P. capsici can survive and remain virulent in Illinois soils for more than 36 months but oospores were no longer viable after 48 months in soil in a field environment.

Age-Related Resistance to Phytophthora Fruit Rot in 'Dickenson Field' Processing Pumpkin and 'Golden Delicious' Winter Squash Fruit

Phytophthora fruit rot, caused by Phytophthora capsici, is a major constraint to cucurbit production for the processing industry in Michigan. Age-related resistance to Phytophthora fruit rot has been identified in pepper and some cucurbit fruit. In this study, 'Dickenson Field' processing pumpkin (Cucurbita moschata) and 'Golden Delicious' winter squash (C. maxima) were evaluated for age-related resistance to Phytophthora fruit rot. Hand-pollinated fruit were harvested 3, 7, 10, 14, 21, 28, 42, or 56 days post pollination (dpp), and inoculated with P. capsici isolate 12889. Susceptibility to Phytophthora fruit rot decreased with fruit age in Dickenson Field processing pumpkin, whereas Golden Delicious winter squash remained susceptible to fruit rot even as fruit reached full physiological maturity. Less than 15% of Dickenson Field fruit 21 dpp or older became diseased. Conversely, about 80% of Golden Delicious fruit 21 dpp or older became diseased. Lesion diameter and pathogen growth density ratings differed significantly (P < 0.0001) among fruit ages for both cultivars, and were negatively correlated (ρ = -0.37 to -0.87) with fruit age. Lesion diameter and pathogen growth were generally greater on younger fruit than older fruit. Lesion diameter was greatest on 7- and 10-dpp-old fruit of Dickenson Field and Golden Delicious, respectively. Pathogen growth density ratings were greatest on 3-dpp-old fruit of both cultivars. Several morphological and physiological changes were observed as fruit matured. Soluble solids content and exocarp firmness of both cultivars increased with fruit age. Lesion diameter and pathogen growth density ratings were negatively correlated (ρ = -0.29 to -0.73) with soluble solids content and exocarp firmness.