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An J, Zhang S, Wu J, Chen H, Xu G, Hou Y, Liu R, Li N, Cui W, Li X, Du Y, Gu Q. Assessing bioartificial organ function: the 3P model framework and its validation. LAB ON A CHIP 2024; 24:1586-1601. [PMID: 38362645 DOI: 10.1039/d3lc01020a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/17/2024]
Abstract
The rapid advancement in the fabrication and culture of in vitro organs has marked a new era in biomedical research. While strides have been made in creating structurally diverse bioartificial organs, such as the liver, which serves as the focal organ in our study, the field lacks a uniform approach for the predictive assessment of liver function. Our research bridges this gap with the introduction of a novel, machine-learning-based "3P model" framework. This model draws on a decade of experimental data across diverse culture platform studies, aiming to identify critical fabrication parameters affecting liver function, particularly in terms of albumin and urea secretion. Through meticulous statistical analysis, we evaluated the functional sustainability of the in vitro liver models. Despite the diversity of research methodologies and the consequent scarcity of standardized data, our regression model effectively captures the patterns observed in experimental findings. The insights gleaned from our study shed light on optimizing culture conditions and advance the evaluation of the functional maintenance capacity of bioartificial livers. This sets a precedent for future functional evaluations of bioartificial organs using machine learning.
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Affiliation(s)
- Jingmin An
- Key Laboratory of Organ Regeneration and Reconstruction, State Key Laboratory of Membrane Biology, The State Key Laboratory of Stem Cell and Reproductive Biology, Institute of Zoology, Chaoyang District, Beijing, 100101, P. R. China.
- Beijing Institute for Stem Cell and Regenerative Medicine, Chaoyang District, Beijing, 100101, P. R. China
- Peking-Tsinghua Center for Life Sciences, Academy for Advanced Interdisciplinary Studies, Peking University, Beijing, 100871, P. R. China
| | - Shuyu Zhang
- Key Laboratory of Organ Regeneration and Reconstruction, State Key Laboratory of Membrane Biology, The State Key Laboratory of Stem Cell and Reproductive Biology, Institute of Zoology, Chaoyang District, Beijing, 100101, P. R. China.
- Beijing Institute for Stem Cell and Regenerative Medicine, Chaoyang District, Beijing, 100101, P. R. China
| | - Juan Wu
- Key Laboratory of Organ Regeneration and Reconstruction, State Key Laboratory of Membrane Biology, The State Key Laboratory of Stem Cell and Reproductive Biology, Institute of Zoology, Chaoyang District, Beijing, 100101, P. R. China.
- Beijing Institute for Stem Cell and Regenerative Medicine, Chaoyang District, Beijing, 100101, P. R. China
- University of Chinese Academy of Sciences, Huairou District, Beijing, 100149, P. R. China
| | - Haolin Chen
- Key Laboratory of Organ Regeneration and Reconstruction, State Key Laboratory of Membrane Biology, The State Key Laboratory of Stem Cell and Reproductive Biology, Institute of Zoology, Chaoyang District, Beijing, 100101, P. R. China.
- Beijing Institute for Stem Cell and Regenerative Medicine, Chaoyang District, Beijing, 100101, P. R. China
- University of Chinese Academy of Sciences, Huairou District, Beijing, 100149, P. R. China
| | - Guoshi Xu
- Key Laboratory of Organ Regeneration and Reconstruction, State Key Laboratory of Membrane Biology, The State Key Laboratory of Stem Cell and Reproductive Biology, Institute of Zoology, Chaoyang District, Beijing, 100101, P. R. China.
- Beijing Institute for Stem Cell and Regenerative Medicine, Chaoyang District, Beijing, 100101, P. R. China
- University of Chinese Academy of Sciences, Huairou District, Beijing, 100149, P. R. China
| | - Yifan Hou
- Key Laboratory of Organ Regeneration and Reconstruction, State Key Laboratory of Membrane Biology, The State Key Laboratory of Stem Cell and Reproductive Biology, Institute of Zoology, Chaoyang District, Beijing, 100101, P. R. China.
- Beijing Institute for Stem Cell and Regenerative Medicine, Chaoyang District, Beijing, 100101, P. R. China
- University of Chinese Academy of Sciences, Huairou District, Beijing, 100149, P. R. China
| | - Ruoyu Liu
- Key Laboratory of Organ Regeneration and Reconstruction, State Key Laboratory of Membrane Biology, The State Key Laboratory of Stem Cell and Reproductive Biology, Institute of Zoology, Chaoyang District, Beijing, 100101, P. R. China.
- Beijing Institute for Stem Cell and Regenerative Medicine, Chaoyang District, Beijing, 100101, P. R. China
| | - Na Li
- Computer Network Information Center, Chinese Academy of Sciences, Beijing, 100864, P.R. China.
| | - Wenjuan Cui
- Computer Network Information Center, Chinese Academy of Sciences, Beijing, 100864, P.R. China.
- University of Chinese Academy of Sciences, Huairou District, Beijing, 100149, P. R. China
| | - Xin Li
- Key Laboratory of Organ Regeneration and Reconstruction, State Key Laboratory of Membrane Biology, The State Key Laboratory of Stem Cell and Reproductive Biology, Institute of Zoology, Chaoyang District, Beijing, 100101, P. R. China.
- Beijing Institute for Stem Cell and Regenerative Medicine, Chaoyang District, Beijing, 100101, P. R. China
- University of Chinese Academy of Sciences, Huairou District, Beijing, 100149, P. R. China
| | - Yi Du
- Computer Network Information Center, Chinese Academy of Sciences, Beijing, 100864, P.R. China.
- University of Chinese Academy of Sciences, Huairou District, Beijing, 100149, P. R. China
| | - Qi Gu
- Key Laboratory of Organ Regeneration and Reconstruction, State Key Laboratory of Membrane Biology, The State Key Laboratory of Stem Cell and Reproductive Biology, Institute of Zoology, Chaoyang District, Beijing, 100101, P. R. China.
- Beijing Institute for Stem Cell and Regenerative Medicine, Chaoyang District, Beijing, 100101, P. R. China
- University of Chinese Academy of Sciences, Huairou District, Beijing, 100149, P. R. China
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