The research on the treatment of primary immunodeficiency diseases by hematopoietic stem cell transplantation: A bibliometric analysis from 2013 to 2022

Evaluating cluster analysis techniques in ChatGPT versus R-language with visualizations of author collaborations and keyword cooccurrences on articles in the Journal of Medicine (Baltimore) 2023: Bibliometric analysis

BACKGROUND

Analyses of author collaborations and keyword co-occurrences are frequently used in bibliographic research. However, no studies have introduced a straightforward yet effective approach, such as utilizing ChatGPT with Code Interpreter (ChatGPT_CI) or the R language, for creating cluster-oriented networks. This research aims to compare cluster analysis methods in ChatGPT_CI and R, visualize country-specific author collaborations, and then demonstrate the most effective approach.

METHODS

The research focused on articles and review pieces from Medicine (Baltimore) published in 2023. By August 20, 2023, we had gathered metadata for 1976 articles using the Web of Science core collections. The efficiency and effectiveness of cluster displays between ChatGPT_CI and R were compared by evaluating their time consumption. The best method was then employed to present a series of visualizations of country-specific author collaborations, rooted in social network and cluster analyses. Visualization techniques incorporating network charts, chord diagrams, circle bar plots, circle packing plots, heat dendrograms, dendrograms, and word clouds were demonstrated. We further highlighted the research profiles of 2 prolific authors using timeline visuals.

RESULTS

The research findings include that (1) the most active contributors were China, Nanjing Medical University (China), the Medical School Department, and Dr Chou from Taiwan when considering countries, institutions, departments, and individual authors, respectively; (2) the highest cited articles originated from Medicine (Baltimore) accounting for 4.53%: New England Journal of Medicine, PLOS ONE, LANCET, and The Journal of the American Medical Association, with respective contributions of 3.25%, 2.7%, 2.52%, and 1.54%; (3) visual cluster analysis in R proved to be more efficient and effective than ChatGPT_CI, reducing the time taken from 1 hour to just 3 minutes; (4) 7 cluster-focused networks were crafted using R on a custom platform; and (5) the research trajectories of 2 prominent authors (Dr Brin from the United States and Dr Chow from Taiwan) and articles themes in Medicine 2023 were depicted using timeline visuals.

CONCLUSIONS

This research highlighted the efficient and effective methods for conducting cluster analyses of author collaborations using R. For future related studies, such as keyword co-occurrence analysis, R is recommended as a viable alternative for bibliographic research.

A comprehensive approach for clustering analysis using follower-leading clustering algorithm (FLCA): Bibliometric analysis

BACKGROUND

There are 3 issues in bibliometrics that need to be addressed: The lack of a clear definition for author collaborations in cluster analysis that takes into account collaborations with and without self-connections; The need to develop a simple yet effective clustering algorithm for use in coword analysis, and; The inadequacy of general bibliometrics in regard to comparing research achievements and identifying articles that are worth reading and recommended for readers. The study aimed to put forth a clustering algorithm for cluster analysis (called following leader clustering [FLCA], a follower-leading clustering algorithm), examine the dissimilarities in cluster outcomes when considering collaborations with and without self-connections in cluster analysis, and demonstrate the application of the clustering algorithm in bibliometrics.

METHODS

The study involved a search for articles and review articles published in JMIR Medical Informatics between 2016 and 2022, conducted using the Web of Science core collections. To identify author collaborations (ACs) and themes over the past 7 years, the study utilized the FLCA algorithm. With the 3 objectives of; Comparing the results obtained from scenarios with and without self-connections; Applying the FLCA algorithm in ACs and themes, and; Reporting the findings using traditional bibliometric approaches based on counts and citations, and all plots were created using R.

RESULTS

The study found a significant difference in cluster outcomes between the 2 scenarios with and without self-connections, with a 53.8% overlap (14 out of the top 20 countries in ACs). The top clusters were led by Yonsei University in South Korea, Grang Luo from the US, and model in institutes, authors, and themes over the past 7 years. The top entities with the most publications in JMIR Medical Informatics were the United States, Yonsei University in South Korea, Medical School, and Grang Luo from the US.

CONCLUSION

The FLCA algorithm proposed in this study offers researchers a comprehensive approach to exploring and comprehending the complex connections among authors or keywords. The study suggests that future research on ACs with cluster analysis should employ FLCA and R visualizations.

Analyzing author collaborations by developing a follower-leader clustering algorithm and identifying top co-authoring countries: Cluster analysis

BACKGROUND

This study aimed to explore suitable clustering algorithms for author collaborations (ACs) in bibliometrics and investigate which countries frequently coauthored with others in recent years. To achieve this, the study developed a method called the Follower-Leading Clustering Algorithm (FLCA) and used it to analyze ACs and cowords in the Journal of Medicine (Baltimore) from 2020 to 2022.

METHODS

This study extracted article metadata from the Web of Science and used the statistical software R to implement FLCA, enabling efficient and reproducible analysis of ACs and cowords in bibliometrics. To determine the countries that easily coauthored with other countries, the study observed the top 20 countries each year and visualized the results using network charts, heatmaps with dendrograms, and Venn diagrams. The study also used chord diagrams to demonstrate the use of FLCA on ACs and cowords in Medicine (Baltimore).

RESULTS

The study observed 12,793 articles, including 5081, 4418, and 3294 in 2020, 2021, and 2022, respectively. The results showed that the FLCA algorithm can accurately identify clusters in bibliometrics, and the USA, China, South Korea, Japan, and Spain were the top 5 countries that commonly coauthored with others during 2020 and 2022. Furthermore, the study identified China, Sichuan University, and diagnosis as the leading entities in countries, institutes, and keywords based on ACs and cowords, respectively. The study highlights the advantages of using cluster analysis and visual displays to analyze ACs in Medicine (Baltimore) and their potential application to coword analysis.

CONCLUSION

The proposed FLCA algorithm provides researchers with a comprehensive means to explore and understand the intricate connections between authors or keywords. Therefore, the study recommends the use of FLCA and visualizations with R for future research on ACs with cluster analysis.