1
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Brewer PJ, Sweet AD. Prevalence and diversity of parasitic bird lice (Insecta: Psocodea) in northeast Arkansas. Int J Parasitol Parasites Wildl 2023; 22:205-215. [PMID: 37941681 PMCID: PMC10628595 DOI: 10.1016/j.ijppaw.2023.06.007] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2023] [Revised: 06/03/2023] [Accepted: 06/21/2023] [Indexed: 11/10/2023]
Abstract
Many groups of parasites lack basic information on biodiversity and host associations, which poses challenges for conservation and understanding the ecological relationships between hosts and their parasites. This gap in knowledge is particularly relevant for parasitic species with obscure lifestyles. Ectoparasitc bird lice (Insecta: Psocodea: Phthiraptera) are a group of parasites that has received a relatively substantial research focus, yet patterns of bird-louse relationships and louse diversity remain understudied in many geographic regions, including in parts of the southeastern United States. In this study, we assessed the diversity, prevalence, abundance, and intensity of lice from live and salvaged birds in northeastern Arkansas. We also focused on the frequency of co-occurrence of lice and symbiotic feather mites. Finally, we used nuclear and mitochondrial genes to assess the phylogenic relationships among the most common genera of lice in our sample. We found a total louse prevalence of 10.57% with the highest prevalence on the Passeriformes families Turdidae, Passerellidae, and Parulidae. We also found the louse genera Myrsidea and Brueelia to be the most prevalent and abundant in our sample. Additionally, we reported several novel associations among well-studied bird species. We also found that louse phylogenic patterns tend to reflect host taxonomy and/or ecology. Overall, our results provide important insight into the biodiversity, community structure, and host interactions of parasitic lice from North American birds.
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Affiliation(s)
- Paige J. Brewer
- Department of Biological Sciences, Arkansas State University, Jonesboro, AR, United States
| | - Andrew D. Sweet
- Department of Biological Sciences, Arkansas State University, Jonesboro, AR, United States
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2
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Sromek L, Ylinen E, Kunnasranta M, Maduna SN, Sinisalo T, Michell CT, Kovacs KM, Lydersen C, Ieshko E, Andrievskaya E, Alexeev V, Leidenberger S, Hagen SB, Nyman T. Loss of species and genetic diversity during colonization: Insights from acanthocephalan parasites in northern European seals. Ecol Evol 2023; 13:e10608. [PMID: 37869427 PMCID: PMC10585441 DOI: 10.1002/ece3.10608] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2023] [Revised: 09/22/2023] [Accepted: 09/25/2023] [Indexed: 10/24/2023] Open
Abstract
Studies on host-parasite systems that have experienced distributional shifts, range fragmentation, and population declines in the past can provide information regarding how parasite community richness and genetic diversity will change as a result of anthropogenic environmental changes in the future. Here, we studied how sequential postglacial colonization, shifts in habitat, and reduced host population sizes have influenced species richness and genetic diversity of Corynosoma (Acanthocephala: Polymorphidae) parasites in northern European marine, brackish, and freshwater seal populations. We collected Corynosoma population samples from Arctic, Baltic, Ladoga, and Saimaa ringed seal subspecies and Baltic gray seals, and then applied COI barcoding and triple-enzyme restriction-site associated DNA (3RAD) sequencing to delimit species, clarify their distributions and community structures, and elucidate patterns of intraspecific gene flow and genetic diversity. Our results showed that Corynosoma species diversity reflected host colonization histories and population sizes, with four species being present in the Arctic, three in the Baltic Sea, two in Lake Ladoga, and only one in Lake Saimaa. We found statistically significant population-genetic differentiation within all three Corynosoma species that occur in more than one seal (sub)species. Genetic diversity tended to be high in Corynosoma populations originating from Arctic ringed seals and low in the landlocked populations. Our results indicate that acanthocephalan communities in landlocked seal populations are impoverished with respect to both species and intraspecific genetic diversity. Interestingly, the loss of genetic diversity within Corynosoma species seems to have been less drastic than in their seal hosts, possibly due to their large local effective population sizes resulting from high infection intensities and effective intra-host population mixing. Our study highlights the utility of genomic methods in investigations of community composition and genetic diversity of understudied parasites.
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Affiliation(s)
- Ludmila Sromek
- Department of Marine Ecosystems Functioning, Institute of OceanographyUniversity of GdanskGdyniaPoland
| | - Eeva Ylinen
- Department of Environmental and Biological SciencesUniversity of Eastern FinlandJoensuuFinland
| | - Mervi Kunnasranta
- Department of Environmental and Biological SciencesUniversity of Eastern FinlandJoensuuFinland
- Natural Resources Institute FinlandJoensuuFinland
| | - Simo N. Maduna
- Department of Ecosystem in the Barents RegionNorwegian Institute of Bioeconomy ResearchSvanvikNorway
| | - Tuula Sinisalo
- Department of Biological and Environmental SciencesUniversity of JyväskyläJyväskyläFinland
| | - Craig T. Michell
- Department of Environmental and Biological SciencesUniversity of Eastern FinlandJoensuuFinland
- Red Sea Research CenterKing Abdullah University of Science and TechnologyJeddahSaudi Arabia
| | | | | | - Evgeny Ieshko
- Institute of Biology, Karelian Research CentreRussian Academy of SciencesPetrozavodskRussia
| | | | | | - Sonja Leidenberger
- Department of Biology and Bioinformatics, School of BioscienceUniversity of SkövdeSkövdeSweden
| | - Snorre B. Hagen
- Department of Ecosystem in the Barents RegionNorwegian Institute of Bioeconomy ResearchSvanvikNorway
| | - Tommi Nyman
- Department of Ecosystem in the Barents RegionNorwegian Institute of Bioeconomy ResearchSvanvikNorway
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3
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Johnson KP. Genomic Approaches to Uncovering the Coevolutionary History of Parasitic Lice. Life (Basel) 2022; 12:life12091442. [PMID: 36143478 PMCID: PMC9501036 DOI: 10.3390/life12091442] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2022] [Revised: 09/09/2022] [Accepted: 09/14/2022] [Indexed: 11/16/2022] Open
Abstract
Simple Summary New sequencing technologies have now made it possible to sequence entire genomes for a diversity of life on earth. Parasites comprise nearly half of all species. Lice are one important group of parasites of birds and mammals, including humans. Genome sequencing approaches have been applied to this group of parasites to uncover patterns of diversification. These patterns can be compared to the patterns of diversification in their hosts. Key findings from these studies have revealed that parasitic lice likely originated on birds and then switched to mammals multiple times. Within groups of birds and mammals, the evolutionary trees of lice match those for mammal hosts more than those for birds. Genomic approaches have also revealed that individual birds and mammals harbor distinct populations of lice. Thus, these new techniques allow for the study of patterns of diversification at a wide variety of scales. Abstract Next-generation sequencing technologies are revolutionizing the fields of genomics, phylogenetics, and population genetics. These new genomic approaches have been extensively applied to a major group of parasites, the lice (Insecta: Phthiraptera) of birds and mammals. Two louse genomes have been assembled and annotated to date, and these have opened up new resources for the study of louse biology. Whole genome sequencing has been used to assemble large phylogenomic datasets for lice, incorporating sequences of thousands of genes. These datasets have provided highly supported trees at all taxonomic levels, ranging from relationships among the major groups of lice to those among closely related species. Such approaches have also been applied at the population scale in lice, revealing patterns of population subdivision and inbreeding. Finally, whole genome sequence datasets can also be used for additional study beyond that of the louse nuclear genome, such as in the study of mitochondrial genome fragmentation or endosymbiont function.
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Affiliation(s)
- Kevin P Johnson
- Illinois Natural History Survey, Prairie Research Institute, University of Illinois, 1816 South Oak Street, Champaign, IL 61820, USA
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4
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Virrueta Herrera S, Johnson KP, Sweet AD, Ylinen E, Kunnasranta M, Nyman T. High levels of inbreeding with spatial and host-associated structure in lice of an endangered freshwater seal. Mol Ecol 2022; 31:4593-4606. [PMID: 35726520 PMCID: PMC9544963 DOI: 10.1111/mec.16569] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2022] [Revised: 05/12/2022] [Accepted: 05/20/2022] [Indexed: 02/02/2023]
Abstract
Host-specialist parasites of endangered large vertebrates are in many cases more endangered than their hosts. In particular, low host population densities and reduced among-host transmission rates are expected to lead to inbreeding within parasite infrapopulations living on single host individuals. Furthermore, spatial population structures of directly-transmitted parasites should be concordant with those of their hosts. Using population genomic approaches, we investigated inbreeding and population structure in a host-specialist seal louse (Echinophthirius horridus) infesting the Saimaa ringed seal (Phoca hispida saimensis), which is endemic to Lake Saimaa in Finland, and is one of the most endangered pinnipeds in the world. We conducted genome resequencing of pairs of lice collected from 18 individual Saimaa ringed seals throughout the Lake Saimaa complex. Our analyses showed high genetic similarity and inbreeding between lice inhabiting the same individual seal host, indicating low among-host transmission rates. Across the lake, genetic differentiation among individual lice was correlated with their geographic distance, and assignment analyses revealed a marked break in the genetic variation of the lice in the middle of the lake, indicating substantial population structure. These findings indicate that movements of Saimaa ringed seals across the main breeding areas of the fragmented Lake Saimaa complex may in fact be more restricted than suggested by previous population-genetic analyses of the seals themselves.
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Affiliation(s)
- Stephany Virrueta Herrera
- Illinois Natural History Survey, Prairie Research Institute, University of Illinois, Champaign, Illinois, USA.,Program in Ecology, Evolution, and Conservation, University of Illinois, Urbana, Illinois, USA
| | - Kevin P Johnson
- Illinois Natural History Survey, Prairie Research Institute, University of Illinois, Champaign, Illinois, USA
| | - Andrew D Sweet
- Department of Biological Sciences, Arkansas State University, Jonesboro, Arkansas, USA
| | - Eeva Ylinen
- Department of Environmental and Biological Sciences, University of Eastern Finland, Joensuu, Finland
| | - Mervi Kunnasranta
- Department of Environmental and Biological Sciences, University of Eastern Finland, Joensuu, Finland.,Natural Resources Institute Finland, Joensuu, Finland
| | - Tommi Nyman
- Department of Ecosystems in the Barents Region, Svanhovd Research Station, Norwegian Institute of Bioeconomy Research, Svanvik, Norway
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5
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Fredericksen M, Ameline C, Krebs M, Hüssy B, Fields PD, Andras JP, Ebert D. Infection phenotypes of a coevolving parasite are highly diverse, structured, and specific. Evolution 2021; 75:2540-2554. [PMID: 34431523 PMCID: PMC9290032 DOI: 10.1111/evo.14323] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2021] [Revised: 06/30/2021] [Accepted: 07/26/2021] [Indexed: 12/27/2022]
Abstract
Understanding how diversity is maintained in natural populations is a major goal of evolutionary biology. In coevolving hosts and parasites, negative frequency-dependent selection is one mechanism predicted to maintain genetic variation. While much is known about host diversity, parasite diversity remains understudied in coevolutionary research. Here, we survey natural diversity in a bacterial parasite by characterizing infection phenotypes for over 50 isolates in relation to 12 genotypes of their host, Daphnia magna. We find striking phenotypic variation among parasite isolates, and we discover the parasite can infect its host through at least five different attachment sites. Variation in attachment success at each site is explained to varying degrees by host and parasite genotypes. A spatial correlation analysis showed that infectivity of different isolates does not correlate with geographic distance, meaning isolates from widespread populations are equally able to infect the host. Overall, our results reveal that infection phenotypes of this parasite are highly diverse. Our results are consistent with the prediction that under Red Queen coevolutionary dynamics both the host and the parasite should show high genetic diversity for traits of functional importance in their interactions.
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Affiliation(s)
- Maridel Fredericksen
- Department of Environmental Sciences, Zoology, University of Basel, CH-4051, Switzerland
| | - Camille Ameline
- Department of Environmental Sciences, Zoology, University of Basel, CH-4051, Switzerland
| | - Michelle Krebs
- Department of Environmental Sciences, Zoology, University of Basel, CH-4051, Switzerland
| | - Benjamin Hüssy
- Department of Environmental Sciences, Zoology, University of Basel, CH-4051, Switzerland
| | - Peter D Fields
- Department of Environmental Sciences, Zoology, University of Basel, CH-4051, Switzerland
| | - Jason P Andras
- Department of Environmental Sciences, Zoology, University of Basel, CH-4051, Switzerland.,Department of Biological Sciences, Clapp Laboratory, Mount Holyoke College, South Hadley, Massachusetts
| | - Dieter Ebert
- Department of Environmental Sciences, Zoology, University of Basel, CH-4051, Switzerland
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6
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Doña J, Virrueta Herrera S, Nyman T, Kunnasranta M, Johnson KP. Patterns of Microbiome Variation Among Infrapopulations of Permanent Bloodsucking Parasites. Front Microbiol 2021; 12:642543. [PMID: 33935998 PMCID: PMC8085356 DOI: 10.3389/fmicb.2021.642543] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2020] [Accepted: 03/26/2021] [Indexed: 12/22/2022] Open
Abstract
While interspecific variation in microbiome composition can often be readily explained by factors such as host species identity, there is still limited knowledge of how microbiomes vary at scales lower than the species level (e.g., between individuals or populations). Here, we evaluated variation in microbiome composition of individual parasites among infrapopulations (i.e., populations of parasites of the same species living on a single host individual). To address this question, we used genome-resolved and shotgun metagenomic data of 17 infrapopulations (balanced design) of the permanent, bloodsucking seal louse Echinophthirius horridus sampled from individual Saimaa ringed seals Pusa hispida saimensis. Both genome-resolved and read-based metagenomic classification approaches consistently show that parasite infrapopulation identity is a significant factor that explains both qualitative and quantitative patterns of microbiome variation at the intraspecific level. This study contributes to the general understanding of the factors driving patterns of intraspecific variation in microbiome composition, especially of bloodsucking parasites, and has implications for understanding how well-known processes occurring at higher taxonomic levels, such as phylosymbiosis, might arise in these systems.
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Affiliation(s)
- Jorge Doña
- Illinois Natural History Survey, Prairie Research Institute, University of Illinois at Urbana-Champaign, Champaign, IL, United States.,Departamento de Biología Animal, Universidad de Granada, Granada, Spain
| | - Stephany Virrueta Herrera
- Illinois Natural History Survey, Prairie Research Institute, University of Illinois at Urbana-Champaign, Champaign, IL, United States
| | - Tommi Nyman
- Department of Ecosystems in the Barents Region, Norwegian Institute of Bioeconomy Research, Svanvik, Norway
| | - Mervi Kunnasranta
- Department of Environmental and Biological Sciences, University of Eastern Finland, Joensuu, Finland.,Natural Resources Institute Finland, Joensuu, Finland
| | - Kevin P Johnson
- Illinois Natural History Survey, Prairie Research Institute, University of Illinois at Urbana-Champaign, Champaign, IL, United States
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7
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Hedrick PW. Galapagos Islands Endemic Vertebrates: A Population Genetics Perspective. J Hered 2020; 110:137-157. [PMID: 30541084 DOI: 10.1093/jhered/esy066] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 12/10/2018] [Indexed: 11/12/2022] Open
Abstract
The organisms of the Galapagos Islands played a central role in the development of the theory of evolution by Charles Darwin. Examination of the population genetics factors of many of these organisms with modern molecular methods has expanded our understanding of their evolution. Here, I provide a perspective on how selection, gene flow, genetic drift, mutation, and inbreeding have contributed to the evolution of 6 iconic Galapagos species: flightless cormorant, pink iguana, marine iguana, Galapagos hawk, giant tortoises, and Darwin's finches. Because of the inherent biological differences among these species that have colonized the Galapagos, different population genetic factors appear to be more or less important in these different species. For example, the Galapagos provided novel environments in which strong selection took place and the Darwin's finches diversified to produce new species and the cormorant adapted to the nutrient-rich western shores of the Galapagos by losing its ability to fly and genomic data have now identified candidate genes. In both the pink iguana, which exists in one small population, and the Galapagos hawk, which has small population sizes, genetic drift has been potentially quite important. There appears to be very limited interisland gene flow in the flightless cormorant and the Galapagos hawk. On the other hand, both the marine iguana and some of the Darwin's finches appear to have significant interisland gene flow. Hybridization between species and subspecies has also introduced new adaptive variation, and in some cases, hybridization might have resulted in despeciation. Overall, new population genetics and genomics research has provided additional insight into the evolution of vertebrate species in the Galapagos.
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8
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Hornok S, Grima A, Takács N, Szekeres S, Kontschán J. First records and molecular-phylogenetic analyses of three tick species (Ixodes kaiseri, Hyalomma lusitanicum and Ornithodoros coniceps) from Malta. Ticks Tick Borne Dis 2020; 11:101379. [PMID: 32001157 DOI: 10.1016/j.ttbdis.2020.101379] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2019] [Revised: 01/09/2020] [Accepted: 01/19/2020] [Indexed: 10/25/2022]
Abstract
The Maltese islands are situated south of mainland Europe and north of Africa, therefore are expected to share tick species and tick-borne pathogens with both continents. This situation highlights the importance of studying ticks in this country. Nevertheless, the tick fauna of Malta appears to be a seldom investigated issue, with hitherto only five tick species reported in the country. Here, as part of a tick collection campaign continuing since 2016 in Malta, three tick species new to the country are reported and analyzed in comparison with GenBank data. Ixodes kaiseri (collected from North African hedgehog in Malta) had unique cytochrome c oxidase subunit I (cox1) and 16S rRNA gene haplotypes (with 98.1-99.3 % sequence identity to I. kaiseri from Europe and China). Phylogenetically, these haplotypes from Malta clustered separately from other, mainland-associated haplotypes, with high support. On the other hand, Ornithodoros coniceps (collected from domestic chicken in Malta) had identical or nearly identical cox1 and 16S rRNA gene haplotypes with soft ticks reported from France, northern Africa and western African islands, similarly to Hyalomma lusitanicum (collected from rabbit and cat in Malta) in comparison with conspecific ticks in Spain and Portugal. These results are most likely related to differences in host associations and corresponding translocality of these three tick species. Taken together, results of the present study add three new tick species to those five already known to be present in Malta.
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Affiliation(s)
- Sándor Hornok
- Department of Parasitology and Zoology, University of Veterinary Medicine, Budapest, Hungary.
| | | | - Nóra Takács
- Department of Parasitology and Zoology, University of Veterinary Medicine, Budapest, Hungary
| | - Sándor Szekeres
- Department of Parasitology and Zoology, University of Veterinary Medicine, Budapest, Hungary
| | - Jenő Kontschán
- Plant Protection Institute, Centre for Agricultural Research, Hungarian Academy of Sciences, Budapest, Hungary
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9
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Bothma JC, Matthee S, Matthee CA. The evolutionary history of parasitic sucking lice and their rodent hosts: A case of evolutionary co‐divergences. ZOOL SCR 2019. [DOI: 10.1111/zsc.12389] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Affiliation(s)
- Johannes C. Bothma
- Evolutionary Genomics Group Department of Botany and Zoology Faculty of Science Stellenbosch University Stellenbosch South Africa
| | - Sonja Matthee
- Department of Conservation Ecology and Entomology Faculty of AgriSciences Stellenbosch University Stellenbosch South Africa
| | - Conrad A. Matthee
- Evolutionary Genomics Group Department of Botany and Zoology Faculty of Science Stellenbosch University Stellenbosch South Africa
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10
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Pérez SD, Grummer JA, Fernandes-Santos RC, José CT, Medici EP, Marcili A. Phylogenetics, patterns of genetic variation and population dynamics of Trypanosoma terrestris support both coevolution and ecological host-fitting as processes driving trypanosome evolution. Parasit Vectors 2019; 12:473. [PMID: 31604471 PMCID: PMC6790053 DOI: 10.1186/s13071-019-3726-y] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2019] [Accepted: 09/16/2019] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND A considerable amount of evidence has favored ecological host-fitting, rather than coevolution, as the main mechanism responsible for trypanosome divergence. Nevertheless, beyond the study of human pathogenic trypanosomes, the genetic basis of host specificity among trypanosomes isolated from forest-inhabiting hosts remains largely unknown. METHODS To test possible scenarios on ecological host-fitting and coevolution, we combined a host capture recapture strategy with parasite genetic data and studied the genetic variation, population dynamics and phylogenetic relationships of Trypanosoma terrestris, a recently described trypanosome species isolated from lowland tapirs in the Brazilian Pantanal and Atlantic Forest biomes. RESULTS We made inferences of T. terrestris population structure at three possible sources of genetic variation: geography, tapir hosts and 'putative' vectors. We found evidence of a bottleneck affecting the contemporary patterns of parasite genetic structure, resulting in little genetic diversity and no evidence of genetic structure among hosts or biomes. Despite this, a strongly divergent haplotype was recorded at a microgeographical scale in the landscape of Nhecolândia in the Pantanal. However, although tapirs are promoting the dispersion of the parasites through the landscape, neither geographical barriers nor tapir hosts were involved in the isolation of this haplotype. Taken together, these findings suggest that either host-switching promoted by putative vectors or declining tapir population densities are influencing the current parasite population dynamics and genetic structure. Similarly, phylogenetic analyses revealed that T. terrestris is strongly linked to the evolutionary history of its perissodactyl hosts, suggesting a coevolving scenario between Perissodactyla and their trypanosomes. Additionally, T. terrestris and T. grayi are closely related, further indicating that host-switching is a common feature promoting trypanosome evolution. CONCLUSIONS This study provides two lines of evidence, both micro- and macroevolutionary, suggesting that both host-switching by ecological fitting and coevolution are two important and non-mutually-exclusive processes driving the evolution of trypanosomes. In line with other parasite systems, our results support that even in the face of host specialization and coevolution, host-switching may be common and is an important determinant of parasite diversification.
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Affiliation(s)
- Sergio D Pérez
- Department of Preventive Veterinary Medicine and Animal Science, Faculty of Veterinary Medicine, University of São Paulo, São Paulo, Brazil.,Departamento de Biología, Facultad de Ciencias, Universidad del Tolima, Ibagué, Colombia
| | - Jared A Grummer
- Department of Zoology and Biodiversity Research Center, University of British Columbia, Vancouver, Canada
| | - Renata C Fernandes-Santos
- Lowland Tapir Conservation Initiative (LTCI), Institute for Ecological Research (IPÊ), Campo Grande, Brazil.,Tapir Specialist Group (TSG), Species Survival Commission (SSC), International Union for Conservation of Nature (IUCN), Houston, USA.,Brazilian Institute for Conservation Medicine (TRÍADE), Campo Grande, Brazil
| | - Caroline Testa José
- Lowland Tapir Conservation Initiative (LTCI), Institute for Ecological Research (IPÊ), Campo Grande, Brazil
| | - Emília Patrícia Medici
- Lowland Tapir Conservation Initiative (LTCI), Institute for Ecological Research (IPÊ), Campo Grande, Brazil.,Tapir Specialist Group (TSG), Species Survival Commission (SSC), International Union for Conservation of Nature (IUCN), Houston, USA.,Escola Superior de Conservação Ambiental e Sustentabilidade (ESCAS/IPÊ), Nazaré Paulista, Brazil
| | - Arlei Marcili
- Department of Preventive Veterinary Medicine and Animal Science, Faculty of Veterinary Medicine, University of São Paulo, São Paulo, Brazil. .,Masters program in Medicine and Animal Welfare, Santo Amaro University, São Paulo, Brazil.
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11
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Sweet AD, Johnson KP. The role of parasite dispersal in shaping a host–parasite system at multiple evolutionary scales. Mol Ecol 2018; 27:5104-5119. [DOI: 10.1111/mec.14937] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2018] [Revised: 10/13/2018] [Accepted: 10/23/2018] [Indexed: 01/02/2023]
Affiliation(s)
- Andrew D. Sweet
- Illinois Natural History Survey, Prairie Research Institute University of Illinois at Urbana‐Champaign Champaign Illinois
| | - Kevin P. Johnson
- Illinois Natural History Survey, Prairie Research Institute University of Illinois at Urbana‐Champaign Champaign Illinois
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12
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Martinů J, Hypša V, Štefka J. Host specificity driving genetic structure and diversity in ectoparasite populations: Coevolutionary patterns in Apodemus mice and their lice. Ecol Evol 2018; 8:10008-10022. [PMID: 30397443 PMCID: PMC6206178 DOI: 10.1002/ece3.4424] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2018] [Revised: 07/03/2018] [Accepted: 07/09/2018] [Indexed: 12/29/2022] Open
Abstract
A degree of host specificity, manifested by the processes of host-parasite cospeciations and host switches, is assumed to be a major determinant of parasites' evolution. To understand these patterns and formulate appropriate ecological hypotheses, we need better insight into the coevolutionary processes at the intraspecific level, including the maintenance of genetic diversity and population structure of parasites and their hosts. Here, we address these questions by analyzing large-scale molecular data on the louse Polyplax serrata and its hosts, mice of the genus Apodemus, across a broad range of European localities. Using mitochondrial DNA sequences and microsatellite data, we demonstrate the general genetic correspondence of the Apodemus/Polyplax system to the scenario of the postglacial recolonization of Europe, but we also show several striking discrepancies. Among the most interesting are the evolution of different degrees of host specificity in closely related louse lineages in sympatry, or decoupled population structures of the host and parasites in central Europe. We also find strong support for the prediction that parasites with narrower host specificity possess a lower level of genetic diversity and a deeper pattern of interpopulation structure as a result of limited dispersal and smaller effective population size.
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Affiliation(s)
- Jana Martinů
- Biology Centre CASInstitute of ParasitologyČeské BudějoviceCzech Republic
- Faculty of ScienceUniversity of South BohemiaČeské BudějoviceCzech Republic
| | - Václav Hypša
- Biology Centre CASInstitute of ParasitologyČeské BudějoviceCzech Republic
- Faculty of ScienceUniversity of South BohemiaČeské BudějoviceCzech Republic
| | - Jan Štefka
- Biology Centre CASInstitute of ParasitologyČeské BudějoviceCzech Republic
- Faculty of ScienceUniversity of South BohemiaČeské BudějoviceCzech Republic
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13
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DiBlasi E, Johnson KP, Stringham SA, Hansen AN, Beach AB, Clayton DH, Bush SE. Phoretic dispersal influences parasite population genetic structure. Mol Ecol 2018; 27:2770-2779. [PMID: 29752753 DOI: 10.1111/mec.14719] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2017] [Revised: 04/15/2018] [Accepted: 04/18/2018] [Indexed: 01/01/2023]
Abstract
Dispersal is a fundamental component of the life history of most species. Dispersal influences fitness, population dynamics, gene flow, genetic drift and population genetic structure. Even small differences in dispersal can alter ecological interactions and trigger an evolutionary cascade. Linking such ecological processes with evolutionary patterns is difficult, but can be carried out in the proper comparative context. Here, we investigate how differences in phoretic dispersal influence the population genetic structure of two different parasites of the same host species. We focus on two species of host-specific feather lice (Phthiraptera: Ischnocera) that co-occur on feral rock pigeons (Columba livia). Although these lice are ecologically very similar, "wing lice" (Columbicola columbae) disperse phoretically by "hitchhiking" on pigeon flies (Diptera: Hippoboscidae), while "body lice" (Campanulotes compar) do not. Differences in the phoretic dispersal of these species are thought to underlie observed differences in host specificity, as well as the degree of host-parasite cospeciation. These ecological and macroevolutionary patterns suggest that body lice should exhibit more genetic differentiation than wing lice. We tested this prediction among lice on individual birds and among lice on birds from three pigeon flocks. We found higher levels of genetic differentiation in body lice compared to wing lice at two spatial scales. Our results indicate that differences in phoretic dispersal can explain microevolutionary differences in population genetic structure and are consistent with macroevolutionary differences in the degree of host-parasite cospeciation.
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Affiliation(s)
- Emily DiBlasi
- Department of Biology, University of Utah, Salt Lake City, Utah
| | - Kevin P Johnson
- Illinois Natural History Survey, Prairie Research Institute, University of Illinois at Urbana-Champaign, Champaign, Illinois
| | | | - Angela N Hansen
- Department of Biology, University of Utah, Salt Lake City, Utah
| | - Andrew B Beach
- Department of Biology, University of Utah, Salt Lake City, Utah
| | - Dale H Clayton
- Department of Biology, University of Utah, Salt Lake City, Utah
| | - Sarah E Bush
- Department of Biology, University of Utah, Salt Lake City, Utah
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14
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Fessl B, Heimpel GE, Causton CE. Invasion of an Avian Nest Parasite, Philornis downsi, to the Galapagos Islands: Colonization History, Adaptations to Novel Ecosystems, and Conservation Challenges. DISEASE ECOLOGY 2018. [DOI: 10.1007/978-3-319-65909-1_9] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
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15
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Light JE, Harper SE, Johnson KP, Demastes JW, Spradling TA. Development and Characterization of 12 Novel Polymorphic Microsatellite Loci for the Mammal Chewing Louse Geomydoecus aurei (Insecta: Phthiraptera) and a Comparison of Next-Generation Sequencing Approaches for Use in Parasitology. J Parasitol 2017; 104:89-95. [PMID: 28985160 DOI: 10.1645/17-130] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022] Open
Abstract
Next-generation sequencing methodologies open the door for evolutionary studies of wildlife parasites. We used 2 next-generation sequencing approaches to discover microsatellite loci in the pocket gopher chewing louse Geomydoecus aurei for use in population genetic studies. In one approach, we sequenced a library enriched for microsatellite loci; in the other approach, we mined microsatellites from genomic sequences. Following microsatellite discovery, promising loci were tested for amplification and polymorphism in 390 louse individuals from 13 pocket gopher hosts. In total, 12 loci were selected for analysis (6 from each methodology), none of which exhibited evidence of null alleles or heterozygote deficiencies. These 12 loci showed adequate genetic diversity for population-level analyses, with 3-9 alleles per locus with an average HE per locus ranging from 0.32 to 0.70. Analysis of Molecular Variance (AMOVA) indicated that genetic variation among infrapopulations accounts for a low, but significant, percentage of the overall genetic variation, and individual louse infrapopulations showed FST values that were significantly different from zero in the majority of pairwise infrapopulation comparisons, despite all 13 infrapopulations being taken from the same locality. Therefore, these 12 polymorphic markers will be useful at the infrapopulation and population levels for future studies involving G. aurei. This study shows that next-generation sequencing methodologies can successfully be used to efficiently obtain data for a variety of evolutionary questions.
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Affiliation(s)
- J E Light
- Department of Wildlife and Fisheries Sciences, Texas A&M University, 534 John Kimbrough Blvd., College Station, Texas 77843
| | - S E Harper
- Department of Wildlife and Fisheries Sciences, Texas A&M University, 534 John Kimbrough Blvd., College Station, Texas 77843
| | - K P Johnson
- Department of Wildlife and Fisheries Sciences, Texas A&M University, 534 John Kimbrough Blvd., College Station, Texas 77843
| | - J W Demastes
- Department of Wildlife and Fisheries Sciences, Texas A&M University, 534 John Kimbrough Blvd., College Station, Texas 77843
| | - T A Spradling
- Department of Wildlife and Fisheries Sciences, Texas A&M University, 534 John Kimbrough Blvd., College Station, Texas 77843
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16
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Trewick SA, Pilkington S, Shepherd LD, Gibb GC, Morgan-Richards M. Closing the gap: Avian lineage splits at a young, narrow seaway imply a protracted history of mixed population response. Mol Ecol 2017; 26:5752-5772. [PMID: 28805283 DOI: 10.1111/mec.14323] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2016] [Revised: 08/01/2017] [Accepted: 08/07/2017] [Indexed: 12/01/2022]
Abstract
The evolutionary significance of spatial habitat gaps has been well recognized since Alfred Russel Wallace compared the faunas of Bali and Lombok. Gaps between islands influence population structuring of some species, and flightless birds are expected to show strong partitioning even where habitat gaps are narrow. We examined the population structure of the most numerous living flightless land bird in New Zealand, Weka (Gallirallus australis). We surveyed Weka and their feather lice in native and introduced populations using genetic data gathered from DNA sequences of mitochondrial genes and nuclear β-fibrinogen and five microsatellite loci. We found low genetic diversity among extant Weka population samples. Two genetic clusters were evident in the mtDNA from Weka and their lice, but partitioning at nuclear loci was less abrupt. Many formerly recognized subspecies/species were not supported; instead, we infer one subspecies for each of the two main New Zealand islands. Although currently range restricted, North Island Weka have higher mtDNA diversity than the more wide-ranging southern Weka. Mismatch and neutrality statistics indicate North Island Weka experienced rapid and recent population reduction, while South Island Weka display the signature of recent expansion. Similar haplotype data from a widespread flying relative of Weka and other New Zealand birds revealed instances of North Island-South Island partitioning associated with a narrow habitat gap (Cook Strait). However, contrasting patterns indicate priority effects and other ecological factors have a strong influence on spatial exchange at this scale.
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Affiliation(s)
- Steve A Trewick
- Ecology Group, Institute of Agriculture and Environment, Massey University, Palmerston North, New Zealand
| | - Stephen Pilkington
- Ecology Group, Institute of Agriculture and Environment, Massey University, Palmerston North, New Zealand
| | - Lara D Shepherd
- Te Papa Tongarewa Museum of New Zealand, Wellington, New Zealand
| | - Gillian C Gibb
- Ecology Group, Institute of Agriculture and Environment, Massey University, Palmerston North, New Zealand
| | - Mary Morgan-Richards
- Ecology Group, Institute of Agriculture and Environment, Massey University, Palmerston North, New Zealand
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17
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Barkman TJ, Klooster MR, Gaddis KD, Franzone B, Calhoun S, Manickam S, Vessabutr S, Sasirat S, Davis CC. Reading between the vines: Hosts as islands for extreme holoparasitic plants. AMERICAN JOURNAL OF BOTANY 2017; 104:1382-1389. [PMID: 29885244 DOI: 10.3732/ajb.1700117] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/26/2017] [Accepted: 08/08/2017] [Indexed: 06/08/2023]
Abstract
PREMISE OF THE STUDY Partitioning of population genetic variation in plants may be affected by numerous factors including life history and dispersal characteristics. In parasitic plants, interactions with host populations may be an additional factor influencing partitioning. To test for hierarchical population genetic patterns related to obligate endoparasitism, we studied three species of Rafflesiaceae, which grow as extremely reduced endophytes infecting Tetrastigma vines in Southeast Asia. METHODS Microsatellite markers were developed and multilocus genotypes were determined for Rafflesia cantleyi, Rafflesia tuan-mudae, and Sapria himalayana and each of their Tetrastigma hosts. Relatedness among parasite individuals was estimated, and AMOVAs were used to determine levels of population genetic subdivision. KEY RESULTS Microsatellite genotypes for 340 paired parasite and host samples revealed that host vines were infected by numerous Rafflesiaceae individuals that may spread for up to 14 m within stem tissues. Surprisingly, Rafflesiaceae parasites within a given host are significantly more closely related to each other than individuals of the same species in other host individuals. The pattern of hierarchical population genetic subdivision we detected across species is likely due to limited seed dispersal with reinfection of natal host vines. CONCLUSIONS These findings demonstrate common population genetic patterns between animal and plant parasites, potentially indicating advantages of close relatives infecting hosts. This study also has important conservation implications for Rafflesiaceae since our data suggest that destruction of a single infected host vine could result in large genetic losses.
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Affiliation(s)
- Todd J Barkman
- Department of Biological Sciences, Western Michigan University, Kalamazoo, Michigan 49008 USA
| | - Matthew R Klooster
- Department of Organismic and Evolutionary Biology, Harvard University Herbaria, Cambridge, Massachusetts 02138 USA
- Biology and Environmental Studies Programs, Centre College, Danville, Kentucky 40422 USA
| | - Keith D Gaddis
- National Aeronautics and Space Administration, Washington, D.C. 20546 USA
| | - Brian Franzone
- Department of Organismic and Evolutionary Biology, Harvard University Herbaria, Cambridge, Massachusetts 02138 USA
| | - Sondra Calhoun
- Department of Organismic and Evolutionary Biology, Harvard University Herbaria, Cambridge, Massachusetts 02138 USA
| | - Sugumaran Manickam
- Rimba Ilmu Botanic Garden, Institute of Biological Sciences, University of Malaya 50603 Kuala Lumpur, Malaysia
| | | | | | - Charles C Davis
- Department of Organismic and Evolutionary Biology, Harvard University Herbaria, Cambridge, Massachusetts 02138 USA
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18
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Rivera‐Parra JL, Levin II, Johnson KP, Parker PG. Host sympatry and body size influence parasite straggling rate in a highly connected multihost, multiparasite system. Ecol Evol 2017; 7:3724-3731. [PMID: 28616169 PMCID: PMC5468160 DOI: 10.1002/ece3.2971] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2016] [Revised: 03/03/2017] [Accepted: 03/16/2017] [Indexed: 11/07/2022] Open
Abstract
Parasite lineages commonly diverge when host lineages diverge. However, when large clades of hosts and parasites are analyzed, some cases suggest host switching as another major diversification mechanism. The first step in host switching is the appearance of a parasite on an atypical host, or “straggling.” We analyze the conditions associated with straggling events. We use five species of colonially nesting seabirds from the Galapagos Archipelago and two genera of highly specific ectoparasitic lice to examine host switching. We use both genetic and morphological identification of lice, together with measurements of spatial distribution of hosts in mixed breeding colonies, to test: (1) effects of local host community composition on straggling parasite identity; (2) effects of relative host density within a mixed colony on straggling frequency and parasite species identity; and (3) how straggling rates are influenced by the specifics of louse attachment. Finally, we determine whether there is evidence of breeding in cases where straggling adult lice were found, which may indicate a shift from straggling to the initial stages of host switching. We analyzed more than 5,000 parasite individuals and found that only ~1% of lice could be considered stragglers, with ~5% of 436 host individuals having straggling parasites. We found that the presence of the typical host and recipient host in the same locality influenced straggling. Additionally, parasites most likely to be found on alternate hosts are those that are smaller than the typical parasite of that host, implying that the ability of lice to attach to the host might limit host switching. Given that lice generally follow Harrison's rule, with larger parasites on larger hosts, parasites infecting the larger host species are less likely to successfully colonize smaller host species. Moreover, our study supports the general perception that successful colonization of a novel host is extremely rare, as we found only one nymph of a straggling species, which may indicate successful reproduction.
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Affiliation(s)
- Jose L. Rivera‐Parra
- Department of Biology and Whitney R. Harris World Ecology CenterUniversity of Missouri—St LouisSt LouisMOUSA
- Departamento de PetróleosFacultad de Geología y PetróleosEscuela Politécnica NacionalQuitoEcuador
| | - Iris I. Levin
- Department of Biology and Whitney R. Harris World Ecology CenterUniversity of Missouri—St LouisSt LouisMOUSA
- Present address: Department of BiologyAgnes Scott CollegeDecaturGAUSA
| | - Kevin P. Johnson
- Illinois Natural History SurveyUniversity of IllinoisChampaignILUSA
| | - Patricia G. Parker
- Department of Biology and Whitney R. Harris World Ecology CenterUniversity of Missouri—St LouisSt LouisMOUSA
- Saint Louis Zoo WildCare InstituteOne Government DriveSaint LouisMOUSA
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19
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Jirsová D, Štefka J, Jirků M. Discordant population histories of host and its parasite: A role for ecological permeability of extreme environment? PLoS One 2017; 12:e0175286. [PMID: 28394904 PMCID: PMC5386267 DOI: 10.1371/journal.pone.0175286] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2016] [Accepted: 03/23/2017] [Indexed: 12/24/2022] Open
Abstract
Biogeographical and ecological barriers strongly affect the course of micro-evolutionary processes in free living organisms. Here we assess the impact of a recently emerged barrier on populations of limnic fauna. Genetic diversity and population structure in a host-parasite system (Wenyonia virilis tapeworm, Synodontis schall catfish) are analyzed in the recently divided Turkana and Nile basins. The two basins, were repeatedly connected during the Holocene wet/dry climatic oscillations, following late Pleistocene dessication of the Turkana basin. Mitochondrial DNA sequences for cytochrome oxidase I gene (cox I) and a whole genome scanning method—amplified fragment length polymorphism (AFLP) were employed. A total of 347 cox I sequences (representing 209 haplotypes) and 716 AFLP fragments, as well as 120 cox I sequences (20 haplotypes) and 532 AFLP fragments were obtained from parasites and hosts, respectively. Although results indicate that host and parasite populations share some formative traits (bottlenecks, Nilotic origin), their population histories/patterns differ markedly. Mitochondrial analysis revealed that parasite populations evolve significantly faster and show remarkably higher genetic variability. Analyses of both markers confirmed that the parasites undergo lineage fission, forming new clusters specific for either freshwater or saline parts of Lake Turkana. In congruence with the geological history, these clusters apparently indicate multiple colonisations of Lake Turkana from the Nile. In contrast, the host population pattern indicates fusion of different colonisation waves. Although fish host populations remain connected, saline habitats in Lake Turkana (absent in the Nile), apparently pose a barrier to the gene flow in the parasite, possibly due to its multihost lifecycle, which involves freshwater annelids. Despite partially corroborating mitochondrial results, AFLP data was not sufficiently informative for analyzing populations with recently mixed biogeographic histories.
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Affiliation(s)
- Dagmar Jirsová
- Faculty of Science, University of South Bohemia, Branišovská, České Budějovice, Czech Republic
- Institute of Parasitology, Biology Centre, Czech Academy of Sciences, Branišovská, České Budějovice, Czech Republic
- * E-mail:
| | - Jan Štefka
- Faculty of Science, University of South Bohemia, Branišovská, České Budějovice, Czech Republic
- Institute of Parasitology, Biology Centre, Czech Academy of Sciences, Branišovská, České Budějovice, Czech Republic
| | - Miloslav Jirků
- Institute of Parasitology, Biology Centre, Czech Academy of Sciences, Branišovská, České Budějovice, Czech Republic
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20
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Diversity and composition of cultivable gut bacteria in an endemic island bird and its mainland sister species. Symbiosis 2016. [DOI: 10.1007/s13199-016-0419-6] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
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21
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Abstract
Haemonchus contortus is one of the most successful and problematic livestock parasites worldwide. From its apparent evolutionary origins in sub-Saharan Africa, it is now found in small ruminants in almost all regions of the globe, and can infect a range of different domestic and wildlife artiodactyl hosts. It has a remarkably high propensity to develop resistance to anthelmintic drugs, making control increasingly difficult. The success of this parasite is, at least in part, due to its extremely high levels of genetic diversity that, in turn, provide a high adaptive capacity. Understanding this genetic diversity is important for many areas of research including anthelmintic resistance, epidemiology, control, drug/vaccine development and molecular diagnostics. In this article, we review the current knowledge of H. contortus genetic diversity and population structure for both field isolates and laboratory strains. We highlight the practical relevance of this knowledge with a particular emphasis on anthelmintic resistance research.
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22
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Dharmarajan G, Beasley JC, Beatty WS, Olson ZH, Fike JA, Rhodes OE. Genetic co‐structuring in host‐parasite systems: Empirical data from raccoons and raccoon ticks. Ecosphere 2016. [DOI: 10.1002/ecs2.1269] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Affiliation(s)
- Guha Dharmarajan
- Department of Forestry and Natural ResourcesPurdue University West Lafayette Indiana 47907 USA
- Department of Biological SciencesIndian Institute of Science Education and Research – Kolkata Mohanpur West Bengal 741246 India
| | - James C. Beasley
- Department of Forestry and Natural ResourcesPurdue University West Lafayette Indiana 47907 USA
- Savannah River Ecology LaboratoryWarnell School of Forestry and Natural ResourcesUniversity of Georgia Drawer E Aiken South Carolina 29802 USA
| | - William S. Beatty
- Department of Forestry and Natural ResourcesPurdue University West Lafayette Indiana 47907 USA
- Alaska Science CenterUnited States Geological Survey Anchorage Alaska 99508 USA
| | - Zachary H. Olson
- Department of Forestry and Natural ResourcesPurdue University West Lafayette Indiana 47907 USA
- University of New England Biddeford Maine 04005 USA
| | - Jennifer A. Fike
- Department of Forestry and Natural ResourcesPurdue University West Lafayette Indiana 47907 USA
- Fort Collins Science Center Fort Collins Colorado 80526 USA
| | - Olin E. Rhodes
- Department of Forestry and Natural ResourcesPurdue University West Lafayette Indiana 47907 USA
- Savannah River Ecology LaboratoryOdum School of EcologyUniversity of Georgia Drawer E Aiken South Carolina 29802 USA
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23
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Rivera-Parra JL, Levin II, Johnson KP, Parker PG. Lineage sorting in multihost parasites: Eidmanniella albescens and Fregatiella aurifasciata on seabirds from the Galapagos Islands. Ecol Evol 2015; 5:3264-71. [PMID: 26380662 PMCID: PMC4569024 DOI: 10.1002/ece3.1587] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2014] [Revised: 06/03/2015] [Accepted: 06/08/2015] [Indexed: 11/06/2022] Open
Abstract
Parasites comprise a significant percentage of the biodiversity of the planet and are useful systems to test evolutionary and ecological hypotheses. In this study, we analyze the effect of host species identity and the immediate local species assemblage within mixed species colonies of nesting seabirds on patterns of genetic clustering within two species of multihost ectoparasitic lice. We use three genetic markers (one mitochondrial, COI, and two nuclear, EF1-α and wingless) and maximum likelihood phylogenetic trees to test whether (1) parasites show lineage sorting based on their host species; and (2) switching of lineages to the alternate host species depends on the immediate local species assemblage of individual hosts within a colony. Specifically, we examine the genetic structure of two louse species: Eidmanniella albescens, infecting both Nazca (Sula granti) and blue-footed boobies (Sula nebouxii), and Fregatiella aurifasciata, infecting both great (Fregata minor) and magnificent frigatebirds (Fregata magnificens). We found that host species identity was the only factor explaining the patterns of genetic structure in both parasites. In both cases, there is evident genetic differentiation depending on the host species. Thus, a revision of the taxonomy of these louse species is needed. One possible explanation of this pattern is extremely low louse migration rates between host species, perhaps influenced by fine-scale spatial separation of host species within mixed colonies, and low parasite infrapopulation numbers.
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Affiliation(s)
- Jose L Rivera-Parra
- Department of Biology and Whitney R. Harris World Ecology Center, University of Missouri - St Louis St Louis, Missouri, 63110 ; Facultad de Geología y Petróleos, Departamento de Petróleos, Escuela Politécnica Nacional del Ecuador Quito, Ecuador
| | - Iris I Levin
- Department of Biology and Whitney R. Harris World Ecology Center, University of Missouri - St Louis St Louis, Missouri, 63110
| | - Kevin P Johnson
- Illinois Natural History Survey, University of Illinois Champaign, Illinois, 61820
| | - Patricia G Parker
- Department of Biology and Whitney R. Harris World Ecology Center, University of Missouri - St Louis St Louis, Missouri, 63110 ; Saint Louis Zoo WildCare Institute, One Government Drive Saint Louis, Missouri, 63110
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24
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Harper SE, Spradling TA, Demastes JW, Calhoun CS. Host behaviour drives parasite genetics at multiple geographic scales: population genetics of the chewing louse,Thomomydoecus minor. Mol Ecol 2015; 24:4129-44. [DOI: 10.1111/mec.13306] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2015] [Revised: 06/12/2015] [Accepted: 07/03/2015] [Indexed: 11/30/2022]
Affiliation(s)
- Sheree E. Harper
- Department of Biology; University of Northern Iowa; Cedar Falls IA 50614-0421 USA
| | - Theresa A. Spradling
- Department of Biology; University of Northern Iowa; Cedar Falls IA 50614-0421 USA
| | - James W. Demastes
- Department of Biology; University of Northern Iowa; Cedar Falls IA 50614-0421 USA
| | - Courtney S. Calhoun
- Department of Biology; University of Northern Iowa; Cedar Falls IA 50614-0421 USA
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25
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Martinu J, Roubova V, Novakova M, Smith VS, Hypsa V, Stefka J. Characterisation of microsatellite loci in two species of lice, Polyplax serrata (Phthiraptera: Anoplura: Polyplacidae) and Myrsidea nesomimi (Phthiraptera: Amblycera: Menoponidae). Folia Parasitol (Praha) 2015; 62. [PMID: 25960560 DOI: 10.14411/fp.2015.016] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2014] [Accepted: 01/09/2015] [Indexed: 11/19/2022]
Abstract
Polymorphic microsatellite loci were characterised for two louse species, the anopluran Polyplax serrata Burmeister, 1839, parasitising Eurasian field mice of the genus Apodemus Kaup, and the amblyceran Myrsidea nesomimi Palma et Price, 2010, found on mocking birds endemic to the Galápagos Islands. Evolutionary histories of the two parasites show complex patterns influenced both by their geographic distribution and through coevolution with their respective hosts, which renders them prospective evolutionary models. In P. serrata, 16 polymorphic loci were characterised and screened across 72 individuals from four European populations that belong to two sympatric mitochondrial lineages differing in their breadth of host-specificity. In M. nesomimi, 66 individuals from three island populations and two host species were genotyped for 15 polymorphic loci. The observed heterozygosity varied from 0.05 to 0.9 in P. serrata and from 0.0 to 0.96 in M. nesomimi. Deviations from the Hardy-Weinberg equilibrium were frequently observed in the populations of both parasites. Fst distances between tested populations correspond with previous phylogenetic data, suggesting the microsatellite loci are an informative resource for ecological and evolutionary studies of the two parasites.
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Affiliation(s)
- Jana Martinu
- Faculty of Science, University of South Bohemia, Ceske Budejovice, Czech Republic.,Institute of Parasitology, Biology Centre of the Czech Academy of Science, Ceske Budejovice, Czech Republic
| | - Veronika Roubova
- Faculty of Science, University of South Bohemia, Ceske Budejovice, Czech Republic
| | - Milena Novakova
- Faculty of Science, University of South Bohemia, Ceske Budejovice, Czech Republic
| | - Vincent S Smith
- Life Sciences Department, Natural History Museum, London, United Kingdom
| | - Vaclav Hypsa
- Faculty of Science, University of South Bohemia, Ceske Budejovice, Czech Republic.,Institute of Parasitology, Biology Centre of the Czech Academy of Science, Ceske Budejovice, Czech Republic
| | - Jan Stefka
- Faculty of Science, University of South Bohemia, Ceske Budejovice, Czech Republic.,Institute of Parasitology, Biology Centre of the Czech Academy of Science, Ceske Budejovice, Czech Republic
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