1
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Sherefedin U, Belay A, Gudishe K, Kebede A, Kumela AG, Wakjira TL, Asemare S, Gurumurthi T, Gelanu D. Investigating the effects of solvent polarity and temperature on the molecular, photophysical, and thermodynamic properties of sinapic acid using DFT and TDDFT. RSC Adv 2024; 14:23364-23377. [PMID: 39049890 PMCID: PMC11267253 DOI: 10.1039/d4ra04829f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2024] [Accepted: 07/13/2024] [Indexed: 07/27/2024] Open
Abstract
Sinapic acid (SA) is widely used in cosmetics, foods, and pharmaceuticals due to its antioxidant, anti-inflammatory, neuroprotective, antimicrobial, antifungal, anticancer, and cardioprotective properties. However, environmental factors such as solvent polarity and temperature can influence its biological activity. This work determined how solvent polarity and temperature affected the molecular, photophysical, and thermodynamic properties of SA in gas and various solvents using semi-empirical (MP6), Hartree-Fock (HF) with the B3LYP method and a 6-311++G(d,p) basis set, and density functional theory (DFT) with various basis sets, such as 3TO-3G*, 3-21G+, 6-31G++G(d,p), 6-311++G(d,p), aug-CC-PVDZ, LanL2DZ, SDD, and DGD2VP. The results indicated that solvent polarity influences molecular and spectroscopic properties, such as bond angles, dihedral angles, bond lengths, FTIR spectra, solvation energy, dipole moments, HOMO-LUMO band gaps, chemical reactivity, and thermodynamic properties, resulting from interactions between the drug and solvent molecules. The findings suggested that increasing the temperature within the range of 100 to 1000 Kelvin leads to an increase in heat capacity, enthalpy, and entropy due to molecular vibrations, ultimately causing degradation and instability in SA. Furthermore, the results showed that SA underwent a redshift in the absorption peak (from 320.18 to 356.26 nm) and a shift in the fluorescence peak (from 381 to 429 nm) in the solvent phase compared to those in the gas phase. Overall, this study provides background knowledge on how solvent polarity and temperature affect the properties of SA molecules.
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Affiliation(s)
- Umer Sherefedin
- Department of Applied Physics, School of Applied Natural Sciences, Adama Science and Technology University Adama P.O. Box 1888 Ethiopia
| | - Abebe Belay
- Department of Applied Physics, School of Applied Natural Sciences, Adama Science and Technology University Adama P.O. Box 1888 Ethiopia
| | - Kusse Gudishe
- Department of Applied Physics, School of Applied Natural and Computational Sciences, Jinka University Jinka Ethiopia
| | - Alemu Kebede
- Department of Applied Physics, School of Applied Natural Sciences, Adama Science and Technology University Adama P.O. Box 1888 Ethiopia
| | - Alemayehu Getahun Kumela
- Department of Applied Physics, School of Applied Natural Sciences, Adama Science and Technology University Adama P.O. Box 1888 Ethiopia
- Department of Applied Physics, College of Natural and Computational Sciences, Mekdela Amba University Tullu Awulia Ethiopia
| | - Tadesse Lemma Wakjira
- Department of Applied Physics, School of Applied Natural Sciences, Adama Science and Technology University Adama P.O. Box 1888 Ethiopia
| | - Semahegn Asemare
- Department of Applied Physics, School of Applied Natural Sciences, Adama Science and Technology University Adama P.O. Box 1888 Ethiopia
| | - T Gurumurthi
- Department of Applied Physics, School of Applied Natural Sciences, Adama Science and Technology University Adama P.O. Box 1888 Ethiopia
| | - Dereje Gelanu
- Department of Applied Physics, School of Applied Natural Sciences, Adama Science and Technology University Adama P.O. Box 1888 Ethiopia
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2
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Stężycka O, Frańska M. Binding of Quercetin Derivatives toward G-Tetrads as Studied by the Survival Yield Method. ACS OMEGA 2023; 8:39816-39821. [PMID: 37901583 PMCID: PMC10600882 DOI: 10.1021/acsomega.3c06016] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/15/2023] [Accepted: 09/27/2023] [Indexed: 10/31/2023]
Abstract
Recently, much interest has been devoted to finding effective G-quadruplex ligands, both of synthetic or natural origins, which may be of potential use in the field of cancer therapy. Among compounds of natural origin, a common flavonol quercetin has attracted notable attention. Yet, only a modest number of papers have been concerned with a comparison of quercetin conjugates binding to G-quadruplexes. In this study, we applied the survival yield (SY) method in order to compare the stability of G-tetrad complexes with quercetin and its conjugates, namely, 3-O-glycosides and O-methylated conjugates. According to the determined values of Ecomδ50, flavonol glycosides bind most effectively with G-tetrads, whereas, among flavonols, 3-O-methylquercetin makes the most effective bonds. Because the aglycone structure is of crucial importance for biological processes, 3-O-methylquercetin seems to be a suitable candidate for anticancer therapeutics, and the extracts from the plants, which contain high amounts of 3-O-methylquercetin or its glycosides, should be considered as interesting materials for preparation of pharmaceuticals or dietary supplements.
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Affiliation(s)
- Olga Stężycka
- Institute of Chemistry and Technical
Electrochemistry, Poznań University
of Technology, Berdychowo
4, 60-965 Poznań, Poland
| | - Magdalena Frańska
- Institute of Chemistry and Technical
Electrochemistry, Poznań University
of Technology, Berdychowo
4, 60-965 Poznań, Poland
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3
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Whittock AL, Abiola TT, Stavros VG. A Perspective on Femtosecond Pump-Probe Spectroscopy in the Development of Future Sunscreens. J Phys Chem A 2022; 126:2299-2308. [PMID: 35394773 PMCID: PMC9036518 DOI: 10.1021/acs.jpca.2c01000] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
![]()
Given
the negative impacts of overexposure to ultraviolet radiation
(UVR) on humans, sunscreens have become a widely used product. Certain
ingredients within sunscreens are responsible for photoprotection
and these are known, collectively herein, as ultraviolet (UV) filters.
Generally speaking, organic UV filters work by absorbing the potentially
harmful UVR and dissipating this energy as harmless heat. This process
happens on picosecond time scales and so femtosecond pump–probe
spectroscopy (FPPS) is an ideal technique for tracking this energy
conversion in real time. Coupling FPPS with complementary techniques,
including steady-state spectroscopy and computational methods, can
provide a detailed mechanistic picture of how UV filters provide photoprotection.
As such, FPPS is crucial in aiding the future design of UV filters.
This Perspective sheds light on the advancements made over the past
two years on both approved and nature-inspired UV filters. Moreover,
we suggest where FPPS can be further utilized within sunscreen applications
for future considerations.
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Affiliation(s)
- Abigail L Whittock
- Department of Chemistry, University of Warwick, Coventry CV4 7AL, United Kingdom.,Analytical Science Centre for Doctoral Training, Senate House, University of Warwick, Coventry CV4 7AL, United Kingdom
| | - Temitope T Abiola
- Department of Chemistry, University of Warwick, Coventry CV4 7AL, United Kingdom
| | - Vasilios G Stavros
- Department of Chemistry, University of Warwick, Coventry CV4 7AL, United Kingdom
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4
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Fan J, Finazzi L, Jan Buma W. Elucidating the photoprotective properties of natural UV screening agents: ZEKE-PFI spectroscopy of methyl sinapate. Phys Chem Chem Phys 2022; 24:3984-3993. [PMID: 35099484 DOI: 10.1039/d1cp05958k] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
As a prominent derivative of a natural sunscreen, methyl sinapate is an ideal candidate to provide fundamental insight into strategies on how to come to a rational design of artificial sunscreen filters with improved photoprotective properties. Here, static and time-resolved Zero Kinetic Energy-Pulsed Field Ionization (ZEKE-PFI) photoelectron spectroscopy has been used to study the spectroscopy and decay pathways of its electronically excited states. We find that different conformers are subject to distinct structural changes upon electronic excitation, and trace the structural changes that occur upon excitation back to the character of the LUMO. Ionization efficiency spectra in combination with pump-probe ZEKE-PFI spectra are consistent with the conclusion that the long-lived electronically excited state observed in the decay of the lowest excited singlet state is the lowest excited triplet state. Concurrently with providing information on the electronically excited states, the studies allow for a detailed characterization of the spectroscopic properties of the ground state of the radical ion, which is important in the context of the use of cinnamates in nature as antioxidants. Our studies determine the adiabatic ionization energies of the syn/cis, anti/cis and anti/trans conformers as 60 291.1 ± 0.5, 60 366.9 ± 0.5 and 60 503.9 ± 1.0 cm-1, respectively, and provide accurate vibrational fequencies of low-frequency modes of the molecular ion in its electronic ground state. Finally, the studies emphasize the important role of vibrational and electronic autoionization processes that start to dominate the ionization dynamics in non-rigid molecules of the present size.
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Affiliation(s)
- Jiayun Fan
- Van 't Hoff Institute for Molecular Sciences, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands.
| | - Laura Finazzi
- Van 't Hoff Institute for Molecular Sciences, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands.
| | - Wybren Jan Buma
- Van 't Hoff Institute for Molecular Sciences, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands. .,Institute for Molecules and Materials, FELIX Laboratory, Radboud University, Toernooiveld 7c, 6525 ED Nijmegen, The Netherlands
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5
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Bocková J, Rebelo A, Ryszka M, Pandey R, Mészáros D, Limão-Vieira P, Papp P, Mason NJ, Townsend D, Nixon KL, Vizcaino V, Poully JC, Eden S. Thermal desorption effects on fragment ion production from multi-photon ionized uridine and selected analogues. RSC Adv 2021; 11:20612-20621. [PMID: 35479354 PMCID: PMC9033967 DOI: 10.1039/d1ra01873f] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2021] [Accepted: 05/09/2021] [Indexed: 12/22/2022] Open
Abstract
Experiments on neutral gas-phase nucleosides are often complicated by thermal lability. Previous mass spectrometry studies of nucleosides have identified enhanced relative production of nucleobase ions (e.g. uracil+ from uridine) as a function of desorption temperature to be the critical indicator of thermal decomposition. On this basis, the present multi-photon ionization (MPI) experiments demonstrate that laser-based thermal desorption is effective for producing uridine, 5-methyluridine, and 2′-deoxyuridine targets without thermal decomposition. Our experiments also revealed one notable thermal dependence: the relative production of the sugar ion C5H9O4+ from intact uridine increased substantially with the desorption laser power and this only occurred at MPI wavelengths below 250 nm (full range studied 222–265 nm). We argue that this effect can only be rationalized plausibly in terms of changing populations of different isomers, tautomers, or conformers in the target as a function of the thermal desorption conditions. Furthermore, the wavelength threshold behavior of this thermally-sensitive MPI channel indicates a critical dependence on neutral excited state dynamics between the absorption of the first and second photons. The experimental results are complemented by density functional theory (DFT) optimizations of the lowest-energy structure of uridine and two further conformers distinguished by different orientations of the hydroxymethyl group on the sugar part of the molecule. The energies of the transitions states between these three conformers are low compared with the energy required for decomposition. This work reveals the first experimental evidence supporting isomer-dependence in the radiation response of a nucleoside.![]()
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Affiliation(s)
- J Bocková
- School of Physical Sciences, The Open University Walton Hall Milton Keynes MK7 6AA UK
| | - A Rebelo
- School of Physical Sciences, The Open University Walton Hall Milton Keynes MK7 6AA UK .,Atomic and Molecular Collisions Laboratory, CEFITEC, Department of Physics, FCT - Universidade NOVA de Lisboa P-2829-516 Caparica Portugal
| | - M Ryszka
- School of Physical Sciences, The Open University Walton Hall Milton Keynes MK7 6AA UK
| | - R Pandey
- School of Physical Sciences, The Open University Walton Hall Milton Keynes MK7 6AA UK
| | - D Mészáros
- Department of Experimental Physics, Comenius University in Bratislava Mlynská dolina F2 84248 Bratislava Slovakia
| | - P Limão-Vieira
- Atomic and Molecular Collisions Laboratory, CEFITEC, Department of Physics, FCT - Universidade NOVA de Lisboa P-2829-516 Caparica Portugal
| | - P Papp
- Department of Experimental Physics, Comenius University in Bratislava Mlynská dolina F2 84248 Bratislava Slovakia
| | - N J Mason
- School of Physical Sciences, The Open University Walton Hall Milton Keynes MK7 6AA UK .,School of Physical Sciences, Ingram Building, University of Kent Canterbury CT2 7NH UK
| | - D Townsend
- Institute of Photonics and Quantum Sciences, Heriot-Watt University Edinburgh EH14 4AS UK.,Institute of Chemical Sciences, Heriot-Watt University Edinburgh EH14 4AS UK
| | - K L Nixon
- School of Life, Health, and Chemical Sciences, The Open University Walton Hall Milton Keynes MK7 6AA UK.,School of Sciences, University of Wolverhampton Wulfruna Street Wolverhampton WV1 1LY UK
| | - V Vizcaino
- CIMAP UMR 6252, CEA/CNRS/ENSICAEN/Université de Caen Normandie, GANIL Bd Becquerel BP 5133 14070 Caen France
| | - J-C Poully
- CIMAP UMR 6252, CEA/CNRS/ENSICAEN/Université de Caen Normandie, GANIL Bd Becquerel BP 5133 14070 Caen France
| | - S Eden
- School of Physical Sciences, The Open University Walton Hall Milton Keynes MK7 6AA UK
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6
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Tikhonov DS, Datta A, Chopra P, Steber AL, Manschwetus B, Schnell M. Approaching black-box calculations of pump-probe fragmentation dynamics of polyatomic molecules. Z PHYS CHEM 2020. [DOI: 10.1515/zpch-2020-0009] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Abstract
Abstract
A general framework for the simulation of ultrafast pump-probe time resolved experiments based on Born-Oppenheimer molecular dynamics (BOMD) is presented. Interaction of the molecular species with a laser is treated by a simple maximum entropy distribution of the excited state occupancies. The latter decay of the electronic excitation into the vibrations is based on an on-the-fly estimation of the rate of the internal conversion, while the energy is distributed in a thermostat-like fashion. The approach was tested by reproducing the results of previous femtosecond studies on ethylene, naphthalene and new results for phenanthrene.
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Affiliation(s)
- Denis S. Tikhonov
- Deutsches Elektronen-Synchrotron (DESY) , Notkestr. 85 , D-22607 Hamburg , Germany
- Institute of Physical Chemistry , Christian-Albrechts-Universität zu Kiel , Max-Eyth-Str. 1 , D-24118 Kiel , Germany
| | - Amlan Datta
- Department of Physical Sciences , Indian Institute of Science Education and Research Kolkata , Mohanpur , Nadia , West Bengal 741246 , India
| | - Pragya Chopra
- Deutsches Elektronen-Synchrotron (DESY) , Notkestr. 85 , D-22607 Hamburg , Germany
- Institute of Physical Chemistry , Christian-Albrechts-Universität zu Kiel , Max-Eyth-Str. 1 , D-24118 Kiel , Germany
| | - Amanda L. Steber
- Deutsches Elektronen-Synchrotron (DESY) , Notkestr. 85 , D-22607 Hamburg , Germany
- Institute of Physical Chemistry , Christian-Albrechts-Universität zu Kiel , Max-Eyth-Str. 1 , D-24118 Kiel , Germany
| | - Bastian Manschwetus
- Deutsches Elektronen-Synchrotron (DESY) , Notkestr. 85 , D-22607 Hamburg , Germany
| | - Melanie Schnell
- Deutsches Elektronen-Synchrotron (DESY) , Notkestr. 85 , D-22607 Hamburg , Germany
- Institute of Physical Chemistry , Christian-Albrechts-Universität zu Kiel , Max-Eyth-Str. 1 , D-24118 Kiel , Germany
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7
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Abstract
Mycosporine-like amino acids have long been known as a natural form of photoprotection for fungi and cyanobacteria. This review will highlight the key time-resolved experimental and theoretical techniques unravelling their photochemistry and photophysics, and directly link this to their use in commercial skin-care products, namely as sunscreen filters. Three case studies have been selected, each having aided advancement in this burgeoning field of research. We discuss these studies in the context of photoprotection and conclude by evaluating the necessary future steps towards translating the photochemistry and photophysics insight of these nature derived sunscreen filters to commercial application.
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Affiliation(s)
- Jack M. Woolley
- Department of Chemistry, University of Warwick, Coventry, UK
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8
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Sapunar M, Domcke W, Došlić N. UV absorption spectra of DNA bases in the 350-190 nm range: assignment and state specific analysis of solvation effects. Phys Chem Chem Phys 2019; 21:22782-22793. [PMID: 31595896 DOI: 10.1039/c9cp04662c] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Abstract
The theoretical assignment of electronic spectra of polyatomic molecules is a challenging problem that requires the specification of the character of a large number of electronic states. We propose a procedure for automatically determining the character of electronic transitions and apply it to the study of UV spectra of DNA bases in the gas phase and in the aqueous environment. The procedure is based on the computation of electronic wave function overlaps and accounts for an extensive sampling of nuclear geometries. Novelties of this work are the theoretical assignment of the electronic spectra of DNA bases up to 190 nm and a state specific analysis of solvation effects. By accounting for different effects contributing to the total solvent shift we obtained a good agreement between the computed and experimental spectra. Effects of vibrational averaging, temperature and solvent-induced structural changes shift excitation energies to lower values. Solvent-solute electrostatic interactions are state specific and strongly destabilize nRyd states, and to lesser extent nπ* and πRyd states. Altogether, this results in the stabilization of ππ* states and destabilization of nπ*, πRyd and nRyd states in solution.
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Affiliation(s)
- Marin Sapunar
- Department of Physical Chemistry, Ruder Bošković Institute, 10000 Zagreb, Croatia.
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9
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Holt EL, Stavros VG. Applications of ultrafast spectroscopy to sunscreen development, from first principles to complex mixtures. INT REV PHYS CHEM 2019. [DOI: 10.1080/0144235x.2019.1663062] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Emily L. Holt
- Molecular Analytical Science Centre for Doctoral Training, Senate House, University of Warwick, Coventry, UK
- Department of Chemistry, University of Warwick, Coventry, UK
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10
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Casals-Sainz JL, Jara-Cortés J, Hernández-Trujillo J, Guevara-Vela JM, Francisco E, Pendás ÁM. Exotic Bonding Regimes Uncovered in Excited States. Chemistry 2019; 25:12169-12179. [PMID: 31310392 DOI: 10.1002/chem.201902369] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2019] [Revised: 07/15/2019] [Indexed: 11/10/2022]
Abstract
Real-space tools were employed to show that the chemical bonding scenario used routinely to understand ground states lacks the necessary flexibility in excited states. It is shown that, even for two-center, two-electron bonds, the real-space bond orders have exotic values that have never been reported. The nature of these situations was uncovered by using electron-counting techniques that provide an appealing statistical interpretation of bonding descriptors, together with simple physical models. Bond orders greater than one as well as negative bond orders for a single bonding electron pair emerge in situations in which the electrons in the pair show a gregarious (bosonic) instead of the usual lonely (fermionic) behavior. In the first case the gregarious pair is intra-atomic, whereas the coupling is interatomic in the second. A number of examples are used to substantiate these claims.
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Affiliation(s)
- José Luis Casals-Sainz
- Departamento de Química FisicayAnalítica, Facultad de Química, Universidad de Oviedo, 33006, Oviedo, Spain
| | - Jesús Jara-Cortés
- Unidad Académica de Ciencias Básicas e Ingenierias, Universidad Autónoma de Nayarit, Tepic, 63155, México
| | | | - José Manuel Guevara-Vela
- Departamento de Química FisicayAnalítica, Facultad de Química, Universidad de Oviedo, 33006, Oviedo, Spain
| | - Evelio Francisco
- Departamento de Química FisicayAnalítica, Facultad de Química, Universidad de Oviedo, 33006, Oviedo, Spain
| | - Ángel Martín Pendás
- Departamento de Química FisicayAnalítica, Facultad de Química, Universidad de Oviedo, 33006, Oviedo, Spain
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11
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Soorkia S, Jouvet C, Grégoire G. UV Photoinduced Dynamics of Conformer-Resolved Aromatic Peptides. Chem Rev 2019; 120:3296-3327. [DOI: 10.1021/acs.chemrev.9b00316] [Citation(s) in RCA: 32] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Affiliation(s)
- Satchin Soorkia
- Institut des Sciences Moléculaires d’Orsay (ISMO), CNRS, Univ. Paris-Sud, Université Paris-Saclay, F-91405 Orsay, France
| | - Christophe Jouvet
- CNRS, Aix Marseille Université, PIIM UMR 7345, 13397, Marseille, France
| | - Gilles Grégoire
- Institut des Sciences Moléculaires d’Orsay (ISMO), CNRS, Univ. Paris-Sud, Université Paris-Saclay, F-91405 Orsay, France
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12
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Mondal S, Puranik M. Sub-50 fs excited state dynamics of 6-chloroguanine upon deep ultraviolet excitation. Phys Chem Chem Phys 2017; 18:13874-87. [PMID: 27146198 DOI: 10.1039/c6cp01746k] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
The photophysical properties of natural nucleobases and their respective nucleotides are ascribed to the sub-picosecond lifetime of their first singlet states in the UV-B region (260-350 nm). Electronic transitions of the ππ* type, which are stronger than those in the UV-B region, lie at the red edge of the UV-C range (100-260 nm) in all isolated nucleobases. The lowest energetic excited states in the UV-B region of nucleobases have been investigated using a plethora of experimental and theoretical methods in gas and solution phases. The sub-picosecond lifetime of these molecules is not a general attribute of all nucleobases but specific to the five primary nucleobases and a few xanthine and methylated derivatives. To determine the overall UV photostability, we aim to understand the effect of more energetic photons lying in the UV-C region on nucleobases. To determine the UV-C initiated photophysics of a nucleobase system, we chose a halogen substituted purine, 6-chloroguanine (6-ClG), that we had investigated previously using resonance Raman spectroscopy. We have performed quantitative measurements of the resonance Raman cross-section across the Bb absorption band (210-230 nm) and constructed the Raman excitation profiles. We modeled the excitation profiles using Lee and Heller's time-dependent theory of resonance Raman intensities to extract the initial excited state dynamics of 6-ClG within 30-50 fs after photoexcitation. We found that imidazole and pyrimidine rings of 6-ClG undergo expansion and contraction, respectively, following photoexcitation to the Bb state. The amount of distortions of the excited state structure from that of the ground state structure is reflected by the total internal reorganization energy that is determined at 112 cm(-1). The contribution of the inertial component of the solvent response towards the total reorganization energy was obtained at 1220 cm(-1). In addition, our simulation also yields an instantaneous response of the first solvation shell within an ultrafast timescale of less than 30 fs following photoexcitation.
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Affiliation(s)
- Sayan Mondal
- Indian Institute of Science Education and Research, Dr. Homi Bhabha Road, Pashan, Pune 411008, India.
| | - Mrinalini Puranik
- Indian Institute of Science Education and Research, Dr. Homi Bhabha Road, Pashan, Pune 411008, India.
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13
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Cole-Filipiak NC, Staniforth M, d. N. Rodrigues N, Peperstraete Y, Stavros VG. Ultrafast Dissociation Dynamics of 2-Ethylpyrrole. J Phys Chem A 2017; 121:969-976. [DOI: 10.1021/acs.jpca.6b12228] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Neil C. Cole-Filipiak
- Department
of Chemistry, University of Warwick, Library Road, Coventry CV4 7AL, United Kingdom
| | - Michael Staniforth
- Department
of Chemistry, University of Warwick, Library Road, Coventry CV4 7AL, United Kingdom
- Department
of Physics, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, United Kingdom
| | | | - Yoann Peperstraete
- AILES
beamline, L’Orme des Merisiers, Synchrotron SOLEIL, Saint Aubin, BP 48, 91192 Gif sur Yvette Cedex, France
| | - Vasilios G. Stavros
- Department
of Chemistry, University of Warwick, Library Road, Coventry CV4 7AL, United Kingdom
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14
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Baker LA, Greenough SE, Stavros VG. A Perspective on the Ultrafast Photochemistry of Solution-Phase Sunscreen Molecules. J Phys Chem Lett 2016; 7:4655-4665. [PMID: 27791379 DOI: 10.1021/acs.jpclett.6b02104] [Citation(s) in RCA: 43] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
Sunscreens are one of the most common ways of providing on-demand additional photoprotection to the skin. Ultrafast transient absorption spectroscopy has recently proven to be an invaluable tool in understanding how the components of commercial sunscreen products display efficient photoprotection. Important examples of how this technique has unravelled the photodynamics of common components are given in this Perspective, and some of the remaining unanswered questions are discussed.
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Affiliation(s)
- Lewis A Baker
- Department of Chemistry, University of Warwick , Gibbet Hill Road, Coventry CV4 7AL, United Kingdom
| | - Simon E Greenough
- Department of Chemistry, University of Sheffield , Sheffield S3 7HF, United Kingdom
| | - Vasilios G Stavros
- Department of Chemistry, University of Warwick , Gibbet Hill Road, Coventry CV4 7AL, United Kingdom
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15
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Rodrigues NDN, Staniforth M, Stavros VG. Photophysics of sunscreen molecules in the gas phase: a stepwise approach towards understanding and developing next-generation sunscreens. Proc Math Phys Eng Sci 2016; 472:20160677. [PMID: 27956888 PMCID: PMC5134319 DOI: 10.1098/rspa.2016.0677] [Citation(s) in RCA: 42] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2016] [Accepted: 10/24/2016] [Indexed: 12/22/2022] Open
Abstract
The relationship between exposure to ultraviolet (UV) radiation and skin cancer urges the need for extra photoprotection, which is presently provided by widespread commercially available sunscreen lotions. Apart from having a large absorption cross section in the UVA and UVB regions of the electromagnetic spectrum, the chemical absorbers in these photoprotective products should also be able to dissipate the excess energy in a safe way, i.e. without releasing photoproducts or inducing any further, harmful, photochemistry. While sunscreens are tested for both their photoprotective capability and dermatological compatibility, phenomena occurring at the molecular level upon absorption of UV radiation are largely overlooked. To date, there is only a limited amount of information regarding the photochemistry and photophysics of these sunscreen molecules. However, a thorough understanding of the intrinsic mechanisms by which popular sunscreen molecular constituents dissipate excess energy has the potential to aid in the design of more efficient, safer sunscreens. In this review, we explore the potential of using gas-phase frequency- and time-resolved spectroscopies in an effort to better understand the photoinduced excited-state dynamics, or photodynamics, of sunscreen molecules. Complementary computational studies are also briefly discussed. Finally, the future outlook of expanding these gas-phase studies into the solution phase is considered.
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16
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Stavros VG, Verlet JRR. Gas-Phase Femtosecond Particle Spectroscopy: A Bottom-Up Approach to Nucleotide Dynamics. Annu Rev Phys Chem 2016; 67:211-32. [PMID: 26980306 DOI: 10.1146/annurev-physchem-040215-112428] [Citation(s) in RCA: 51] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
We summarize how gas-phase ultrafast charged-particle spectroscopy has been used to provide an understanding of the photophysics of DNA building blocks. We focus on adenine and discuss how, following UV excitation, specific interactions determine the fates of its excited states. The dynamics can be probed using a systematic bottom-up approach that provides control over these interactions and that allows ever-larger complexes to be studied. Starting from a chromophore in adenine, the excited state decay mechanisms of adenine and chemically substituted or clustered adenine are considered and then extended to adenosine mono-, di-, and trinucleotides. We show that the gas-phase approach can offer exquisite insight into the dynamics observed in aqueous solution, but we also highlight stark differences. An outlook is provided that discusses some of the most promising developments in this bottom-up approach.
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Affiliation(s)
- Vasilios G Stavros
- Department of Chemistry, University of Warwick, Coventry, CV4 7AL, United Kingdom;
| | - Jan R R Verlet
- Department of Chemistry, University of Durham, Durham, DH1 3LE, United Kingdom;
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Peperstraete Y, Staniforth M, Baker LA, Rodrigues NDN, Cole-Filipiak NC, Quan WD, Stavros VG. Bottom-up excited state dynamics of two cinnamate-based sunscreen filter molecules. Phys Chem Chem Phys 2016; 18:28140-28149. [DOI: 10.1039/c6cp05205c] [Citation(s) in RCA: 39] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
We have used time-resolved pump–probe spectroscopy to explore E-MMC's and E-EHMC's excited state dynamics upon UV-B photoexcitation.
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18
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Shin JW, Bernstein ER. Vacuum ultraviolet photoionization of carbohydrates and nucleotides. J Chem Phys 2015; 140:044330. [PMID: 25669546 DOI: 10.1063/1.4862829] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
Carbohydrates (2-deoxyribose, ribose, and xylose) and nucleotides (adenosine-, cytidine-, guanosine-, and uridine-5(')-monophosphate) are generated in the gas phase, and ionized with vacuum ultraviolet photons (VUV, 118.2 nm). The observed time of flight mass spectra of the carbohydrate fragmentation are similar to those observed [J.-W. Shin, F. Dong, M. Grisham, J. J. Rocca, and E. R. Bernstein, Chem. Phys. Lett. 506, 161 (2011)] for 46.9 nm photon ionization, but with more intensity in higher mass fragment ions. The tendency of carbohydrate ions to fragment extensively following ionization seemingly suggests that nucleic acids might undergo radiation damage as a result of carbohydrate, rather than nucleobase fragmentation. VUV photoionization of nucleotides (monophosphate-carbohydrate-nucleobase), however, shows that the carbohydrate-nucleobase bond is the primary fragmentation site for these species. Density functional theory (DFT) calculations indicate that the removed carbohydrate electrons by the 118.2 nm photons are associated with endocyclic C-C and C-O ring centered orbitals: loss of electron density in the ring bonds of the nascent ion can thus account for the observed fragmentation patterns following carbohydrate ionization. DFT calculations also indicate that electrons removed from nucleotides under these same conditions are associated with orbitals involved with the nucleobase-saccharide linkage electron density. The calculations give a general mechanism and explanation of the experimental results.
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Affiliation(s)
- Joong-Won Shin
- Division of Science, Governors State University, University Park, Illinois 60484-0975, USA
| | - Elliot R Bernstein
- Department of Chemistry, Colorado State University, Fort Collins, Colorado 80523-1872, USA
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19
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Poully JC, Vizcaino V, Schwob L, Delaunay R, Kocisek J, Eden S, Chesnel JY, Méry A, Rangama J, Adoui L, Huber B. Formation and Fragmentation of Protonated Molecules after Ionization of Amino Acid and Lactic Acid Clusters by Collision with Ions in the Gas Phase. Chemphyschem 2015; 16:2389-96. [DOI: 10.1002/cphc.201500275] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2015] [Indexed: 11/11/2022]
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20
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Horbury MD, Baker LA, Quan WD, Young JD, Staniforth M, Greenough SE, Stavros VG. Bridging the Gap between the Gas Phase and Solution Phase: Solvent Specific Photochemistry in 4-tert-Butylcatechol. J Phys Chem A 2015; 119:11989-96. [DOI: 10.1021/acs.jpca.5b03621] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Michael D. Horbury
- Department of Chemistry, University of Warwick, Gibbet Hill
Road, Coventry, CV4 7AL, U.K
| | - Lewis A. Baker
- Department of Chemistry, University of Warwick, Gibbet Hill
Road, Coventry, CV4 7AL, U.K
| | - Wen-Dong Quan
- Department of Chemistry, University of Warwick, Gibbet Hill
Road, Coventry, CV4 7AL, U.K
| | - Jamie D. Young
- Department of Chemistry, University of Warwick, Gibbet Hill
Road, Coventry, CV4 7AL, U.K
| | - Michael Staniforth
- Department of Chemistry, University of Warwick, Gibbet Hill
Road, Coventry, CV4 7AL, U.K
| | - Simon E. Greenough
- Department of Chemistry, University of Warwick, Gibbet Hill
Road, Coventry, CV4 7AL, U.K
| | - Vasilios G. Stavros
- Department of Chemistry, University of Warwick, Gibbet Hill
Road, Coventry, CV4 7AL, U.K
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21
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Greenough SE, Horbury MD, Thompson JOF, Roberts GM, Karsili TNV, Marchetti B, Townsend D, Stavros VG. Solvent induced conformer specific photochemistry of guaiacol. Phys Chem Chem Phys 2015; 16:16187-95. [PMID: 24967653 DOI: 10.1039/c4cp02424a] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Using a combination of ultrafast solution- and gas-phase spectroscopies, together with high-level theory calculations, we demonstrate that we are able to track conformer-specific photodissociation dynamics in solution through solvent choice. We reveal this phenomenon in guaiacol (2-methoxyphenol), a key subunit of the natural biopolymer lignin. In cyclohexane, the first electronically excited (1)ππ* (S1) state in guaiacol relaxes with a time-constant of τ = 4.5 ± 0.2 ns, mediated through intersystem crossing to lower lying triplet (Tn) states and internal conversion and fluorescence back to the ground state (S0). In contrast, in methanol, a further relaxation channel is also present; the S1 state relaxes with a time-constant of τ = 2.9 ± 0.1 ns, which is now additionally mediated through coupling onto a dissociative (1)πσ* (S2) state and subsequent O-H bond fission, evidenced through the appearance of a spectral signature for the guaiacoxyl radical after ∼250 ps. With the aid of complementary calculations, we attribute this to the now absent intramolecular H-bond between OH and OMe moieties, which now favours intermolecular H-bonding to methanol, lowering the barrier to O-H dissociation and facilitating H-atom loss via tunnelling.
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Affiliation(s)
- Simon E Greenough
- Department of Chemistry, University of Warwick, Coventry CV4 7AL, UK.
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22
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Staniforth M, Young JD, Cole DR, Karsili TNV, Ashfold MNR, Stavros VG. Ultrafast Excited-State Dynamics of 2,4-Dimethylpyrrole. J Phys Chem A 2014; 118:10909-18. [DOI: 10.1021/jp508919s] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Michael Staniforth
- Department
of Chemistry, University of Warwick, Library Road, Coventry, CV4 7AL, U.K
| | - Jamie D. Young
- Department
of Chemistry, University of Warwick, Library Road, Coventry, CV4 7AL, U.K
| | - Daniel R. Cole
- Department
of Chemistry, University of Warwick, Library Road, Coventry, CV4 7AL, U.K
| | - Tolga N. V. Karsili
- School
of Chemistry, University of Bristol, Cantock’s Close, Bristol, BS8 1TS, U.K
| | | | - Vasilios G. Stavros
- Department
of Chemistry, University of Warwick, Library Road, Coventry, CV4 7AL, U.K
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23
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Mai S, Richter M, Marquetand P, González L. Excitation of Nucleobases from a Computational Perspective II: Dynamics. Top Curr Chem (Cham) 2014; 355:99-153. [DOI: 10.1007/128_2014_549] [Citation(s) in RCA: 37] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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24
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Chatterley AS, West CW, Stavros VG, Verlet JRR. Time-resolved photoelectron imaging of the isolated deprotonated nucleotides. Chem Sci 2014. [DOI: 10.1039/c4sc01493f] [Citation(s) in RCA: 42] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Time-resolved photoelectron spectroscopy of deprotonated nucleotides provides new insights into their relaxation dynamics.
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Affiliation(s)
- Adam S. Chatterley
- Department
- of Chemistry
- University of Durham
- Durham DH1 3LE, United Kingdom
- Department of Chemistry
| | | | - Vasilios G. Stavros
- Department of Chemistry
- University of Warwick
- Coventry CV4 7AL, United Kingdom
| | - Jan R. R. Verlet
- Department
- of Chemistry
- University of Durham
- Durham DH1 3LE, United Kingdom
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Roberts GM, Stavros VG. The role of πσ* states in the photochemistry of heteroaromatic biomolecules and their subunits: insights from gas-phase femtosecond spectroscopy. Chem Sci 2014. [DOI: 10.1039/c3sc53175a] [Citation(s) in RCA: 119] [Impact Index Per Article: 11.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023] Open
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