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Nicolai A, Guernion M, Guillocheau S, Hoeffner K, Le Gouar P, Ménard N, Piscart C, Vallet D, Hervé MET, Benezeth E, Chedanne H, Blémus J, Vernon P, Cylly D, Hotte H, Loïs G, Mai B, Perez G, Ouisse T, Monard C, Wiegand C, Caudal JP, Butet A, Dahirel M, Barbe L, Balbi M, Briand V, Bormans M, Charrier M, Bouger G, Jung V, Le Lann C, Pannard A, Petillon J, Rantier Y, Marguerie D, Tougeron K, Devogel P, Dugravot S, Dubos T, Garrin M, Carnet M, Gouraud C, Chambet A, Esnault J, Poupelin M, Welk E, Bütof A, Dubois GF, Humbert G, Marie-Réau O, Norvez O, Richard G, Froger B, Rochais C, Potthoff M, Ayati K, Bellido A, Rissel A, Santonja M, Farcy JO, Collias E, Sene L, Cluzeau D, Supper R. Transdisciplinary Bioblitz: Rapid biotic and abiotic inventory allows studying environmental changes over 60 years at the Biological Field Station of Paimpont (Brittany, France) and opens new interdisciplinary research opportunities. Biodivers Data J 2020; 8:e50451. [PMID: 32269479 PMCID: PMC7125239 DOI: 10.3897/bdj.8.e50451] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2020] [Accepted: 02/29/2020] [Indexed: 11/22/2022] Open
Abstract
BACKGROUND The Biological Field Station of Paimpont (Station Biologique de Paimpont, SBP), owned by the University of Rennes and located in the Brocéliande Forest of Brittany (France), has been hosting student scientific research and field trips during the last 60 years. The study area of the SBP is a landscape mosaic of 17 ha composed of gorse moors, forests, prairies, ponds and creeks. Land use has evolved over time. Historical surveys by students and researchers focused on insects and birds. With this study, we aimed to increase the range of taxa observations, document changes in species composition and landscape and provide a basis for interdisciplinary research perspectives. We gathered historical data, implemented an all-taxon biodiversity inventory (ATBI) in different habitats of the SBP study area, measured abiotic factors in the air, water and soil and performed a photographical landscape observation during the BioBlitz held in July 2017. NEW INFORMATION During the 24 h BioBlitz, organised by the SBP and the EcoBio lab from the University of Rennes and the French National Center of Scientific Research (CNRS), different habitats were individually sampled. Seventy-seven experts, accompanied by 120 citizens and 12 young people participating in the European Volunteer Service, observed, identified and databased 660 species covering 5 kingdoms, 8 phyla, 21 classes, 90 orders and 247 families. In total, there were 1819 occurrences including records identified to higher taxon ranks, thereby adding one more kingdom and four more phyla. Historical data collection resulted in 1176 species and 4270 occurrences databased. We also recorded 13 climatic parameters, 10 soil parameters and 18 water parameters during the BioBlitz. Current habitats were mapped and socio-ecological landscape changes were assessed with a diachronic approach using 32 historical photographs and historical maps. The coupling of historical biodiversity data with new biotic and abiotic data and a photographic comparison of landscape changes allows an integrative understanding of how the SBP changed from agriculturally-used land to a managed natural area within the last 60 years. Hence, this BioBlitz represents an important holistic sampling of biodiversity for studies on trophic webs or on trophic interactions or on very diverse, but connected, habitats. The integration of social, biotic and abiotic data opens innovative research opportunities on the evolution of socio-ecosystems and landscapes.
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Affiliation(s)
- Annegret Nicolai
- Université Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSUR, Paimpont, FranceUniversité Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSURPaimpontFrance
| | - Muriel Guernion
- Université Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSUR, Paimpont, FranceUniversité Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSURPaimpontFrance
| | - Sarah Guillocheau
- Université Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSUR, Paimpont, FranceUniversité Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSURPaimpontFrance
| | - Kevin Hoeffner
- Université Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSUR, Paimpont, FranceUniversité Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSURPaimpontFrance
| | - Pascaline Le Gouar
- Université Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSUR, Paimpont, FranceUniversité Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSURPaimpontFrance
| | - Nelly Ménard
- Université Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSUR, Paimpont, FranceUniversité Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSURPaimpontFrance
| | - Christophe Piscart
- Université Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSUR, Paimpont, FranceUniversité Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSURPaimpontFrance
| | - Dominique Vallet
- Université Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSUR, Paimpont, FranceUniversité Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSURPaimpontFrance
| | - Morgane E. T. Hervé
- Université Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSUR, Paimpont, FranceUniversité Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSURPaimpontFrance
| | - Elora Benezeth
- Université Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSUR, Paimpont, FranceUniversité Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSURPaimpontFrance
| | - Hughes Chedanne
- Université Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSUR, Paimpont, FranceUniversité Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSURPaimpontFrance
| | - Jérémie Blémus
- Université Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSUR, Paimpont, FranceUniversité Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSURPaimpontFrance
| | - Philippe Vernon
- Université Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSUR, Paimpont, FranceUniversité Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSURPaimpontFrance
| | - Daniel Cylly
- Université Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSUR, Paimpont, FranceUniversité Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSURPaimpontFrance
| | - Hoël Hotte
- Université Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSUR, Paimpont, FranceUniversité Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSURPaimpontFrance
| | - Grégoire Loïs
- MNHN, UMR 7204 CESCO, Paris, FranceMNHN, UMR 7204 CESCOParisFrance
| | - Barbara Mai
- unaffiliated, Rennes, FranceunaffiliatedRennesFrance
| | - Grégoire Perez
- Université Rennes 1, UMR-CNRS 6553 EcoBio/OSUR, Rennes, FranceUniversité Rennes 1, UMR-CNRS 6553 EcoBio/OSURRennesFrance
| | - Tiphaine Ouisse
- Université Rennes 1, UMR-CNRS 6553 EcoBio/OSUR, Rennes, FranceUniversité Rennes 1, UMR-CNRS 6553 EcoBio/OSURRennesFrance
| | - Cécile Monard
- Université Rennes 1, UMR-CNRS 6553 EcoBio/OSUR, Rennes, FranceUniversité Rennes 1, UMR-CNRS 6553 EcoBio/OSURRennesFrance
| | - Claudia Wiegand
- Université Rennes 1, UMR-CNRS 6553 EcoBio/OSUR, Rennes, FranceUniversité Rennes 1, UMR-CNRS 6553 EcoBio/OSURRennesFrance
| | - Jean-Pierre Caudal
- Université Rennes 1, UMR-CNRS 6553 EcoBio/OSUR, Rennes, FranceUniversité Rennes 1, UMR-CNRS 6553 EcoBio/OSURRennesFrance
| | - Alain Butet
- Université Rennes 1, UMR-CNRS 6553 EcoBio/OSUR, Rennes, FranceUniversité Rennes 1, UMR-CNRS 6553 EcoBio/OSURRennesFrance
| | - Maxime Dahirel
- Université Rennes 1, UMR-CNRS 6553 EcoBio/OSUR, Rennes, FranceUniversité Rennes 1, UMR-CNRS 6553 EcoBio/OSURRennesFrance
| | - Lou Barbe
- Université Rennes 1, UMR-CNRS 6553 EcoBio/OSUR, Rennes, FranceUniversité Rennes 1, UMR-CNRS 6553 EcoBio/OSURRennesFrance
| | - Manon Balbi
- Université Rennes 1, UMR-CNRS 6553 EcoBio/OSUR, Rennes, FranceUniversité Rennes 1, UMR-CNRS 6553 EcoBio/OSURRennesFrance
| | - Valérie Briand
- Université Rennes 1, UMR-CNRS 6553 EcoBio/OSUR, Rennes, FranceUniversité Rennes 1, UMR-CNRS 6553 EcoBio/OSURRennesFrance
| | - Myriam Bormans
- Université Rennes 1, UMR-CNRS 6553 EcoBio/OSUR, Rennes, FranceUniversité Rennes 1, UMR-CNRS 6553 EcoBio/OSURRennesFrance
| | - Maryvonne Charrier
- Université Rennes 1, UMR-CNRS 6553 EcoBio/OSUR, Rennes, FranceUniversité Rennes 1, UMR-CNRS 6553 EcoBio/OSURRennesFrance
| | - Guillaume Bouger
- Université Rennes 1, Observatoire des Sciences de l'Univers de Rennes (OSUR), UMS 3343, Rennes, FranceUniversité Rennes 1, Observatoire des Sciences de l'Univers de Rennes (OSUR), UMS 3343RennesFrance
| | - Vincent Jung
- Université Rennes 1, UMR-CNRS 6553 EcoBio/OSUR, Rennes, FranceUniversité Rennes 1, UMR-CNRS 6553 EcoBio/OSURRennesFrance
| | - Cécile Le Lann
- Université Rennes 1, UMR-CNRS 6553 EcoBio/OSUR, Rennes, FranceUniversité Rennes 1, UMR-CNRS 6553 EcoBio/OSURRennesFrance
| | - Alexandrine Pannard
- Université Rennes 1, UMR-CNRS 6553 EcoBio/OSUR, Rennes, FranceUniversité Rennes 1, UMR-CNRS 6553 EcoBio/OSURRennesFrance
| | - Julien Petillon
- Université Rennes 1, UMR-CNRS 6553 EcoBio/OSUR, Rennes, FranceUniversité Rennes 1, UMR-CNRS 6553 EcoBio/OSURRennesFrance
| | - Yann Rantier
- Université Rennes 1, UMR-CNRS 6553 EcoBio/OSUR, Rennes, FranceUniversité Rennes 1, UMR-CNRS 6553 EcoBio/OSURRennesFrance
| | - Dominique Marguerie
- Université Rennes 1, UMR-CNRS 6553 EcoBio/OSUR, Rennes, FranceUniversité Rennes 1, UMR-CNRS 6553 EcoBio/OSURRennesFrance
| | - Kevin Tougeron
- Université Rennes 1, UMR-CNRS 6553 EcoBio/OSUR, Rennes, FranceUniversité Rennes 1, UMR-CNRS 6553 EcoBio/OSURRennesFrance
| | - Pierre Devogel
- Université Rennes 1, EA 7462 G-TUBE, Rennes, FranceUniversité Rennes 1, EA 7462 G-TUBERennesFrance
| | - Sébastien Dugravot
- Université Rennes 1, EA 7462 G-TUBE, Rennes, FranceUniversité Rennes 1, EA 7462 G-TUBERennesFrance
| | - Thomas Dubos
- Groupe Mammalogique de Bretagne, Redon, FranceGroupe Mammalogique de BretagneRedonFrance
| | | | | | | | - Audrey Chambet
- Université Rennes 1, Collections de botanique et herbiers, Rennes, FranceUniversité Rennes 1, Collections de botanique et herbiersRennesFrance
| | - Joël Esnault
- Conservatoire Botanique National de Brest, Brest, FranceConservatoire Botanique National de BrestBrestFrance
| | - Maxime Poupelin
- CPN les p'tites natures de Brocéliande, Paimpont, FranceCPN les p'tites natures de BrocéliandePaimpontFrance
| | - Erik Welk
- Martin-Luther-Universität Halle-Wittenberg, Halle, GermanyMartin-Luther-Universität Halle-WittenbergHalleGermany
| | - Astrid Bütof
- unaffiliated, Halle, GermanyunaffiliatedHalleGermany
| | | | - Guillaume Humbert
- Université Pierre et Marie Curie, Paris, FranceUniversité Pierre et Marie CurieParisFrance
| | | | - Olivier Norvez
- Agence Française de la Biodiversité, Cesson-Sévigné, FranceAgence Française de la BiodiversitéCesson-SévignéFrance
| | - Gaëlle Richard
- Université Rennes 1, Collection Zoologie, Rennes, FranceUniversité Rennes 1, Collection ZoologieRennesFrance
| | - Benoît Froger
- Bretagne Vivante, Brest, FranceBretagne VivanteBrestFrance
| | - Céline Rochais
- Université Rennes 1, Station Biologique de Paimpont, UMR 6552 EthoS, Paimpont, FranceUniversité Rennes 1, Station Biologique de Paimpont, UMR 6552 EthoSPaimpontFrance
| | - Martin Potthoff
- Universität Göttingen, CBL, Göttingen, GermanyUniversität Göttingen, CBLGöttingenGermany
| | - Khaoula Ayati
- Faculty of Science of Bizerte, Zarzuna, TunisiaFaculty of Science of BizerteZarzunaTunisia
| | - Alain Bellido
- Encyclopédie de Brocéliande, Paimpont, FranceEncyclopédie de BrocéliandePaimpontFrance
| | - Alain Rissel
- Encyclopédie de Brocéliande, Paimpont, FranceEncyclopédie de BrocéliandePaimpontFrance
| | - Mathieu Santonja
- Aix Marseille Univ, Avignon Université, CNRS, IRD, IMBE, Marseille, FranceAix Marseille Univ, Avignon Université, CNRS, IRD, IMBEMarseilleFrance
| | | | - Eric Collias
- unaffiliated, Rennes, FranceunaffiliatedRennesFrance
| | - Lina Sene
- Université Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSUR, Paimpont, FranceUniversité Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSURPaimpontFrance
| | - Daniel Cluzeau
- Université Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSUR, Paimpont, FranceUniversité Rennes 1, Station Biologique de Paimpont, UMR-CNRS 6553 EcoBio/OSURPaimpontFrance
| | - Régis Supper
- Université Rennes 1, Station Biologique de Paimpont, Paimpont, FranceUniversité Rennes 1, Station Biologique de PaimpontPaimpontFrance
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Duarte G, Moreira M, Branco P, da Costa L, Ferreira MT, Segurado P. One millennium of historical freshwater fish occurrence data for Portuguese rivers and streams. Sci Data 2018; 5:180163. [PMID: 30106390 PMCID: PMC6091242 DOI: 10.1038/sdata.2018.163] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2018] [Accepted: 06/21/2018] [Indexed: 11/08/2022] Open
Abstract
The insights that historical evidence of human presence and man-made documents provide are unique. For example, using historical data may be critical to adequately understand the ecological requirements of species. However, historical information about freshwater species distribution remains largely a knowledge gap. In this Data Descriptor, we present the Portuguese Historical Fish Database (PHish-DB), a compilation of 2214 records (557 at the basin scale, 184 at the sub-basin scale and 1473 at the segment scale) resulting from a survey of 194 historical documents. The database was developed using a three-scale approach that maximises the inclusion of information by allowing different degrees of spatial acuity. PHish database contains records of 25 taxonomical groups and covers a time span of one millennium, from the 11th until the 20th century. This database has already proven useful for two scientific studies, and PHish further use will contribute to correctly assess the full range of conditions tolerated by species, by establishing adequate benchmark conditions, and/or to improve existing knowledge of the species distribution limits.
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Affiliation(s)
- Gonçalo Duarte
- University of Lisbon, School of Agriculture, Forest Research Centre, Tapada da Ajuda, 1349-017 Lisbon, Portugal
| | - Miguel Moreira
- University of Lisbon, Instituto Superior Técnico, CERIS-Civil Engineering Research and Innovation for Sustainability, Avenida Rovisco Pais, 1049-001 Lisbon, Portugal
| | - Paulo Branco
- University of Lisbon, School of Agriculture, Forest Research Centre, Tapada da Ajuda, 1349-017 Lisbon, Portugal
| | - Luís da Costa
- University of Lisbon, School of Agriculture, Forest Research Centre, Tapada da Ajuda, 1349-017 Lisbon, Portugal
- Centre for Ecology, Evolution and Environmental Changes (cE3c), Museu Nacional de História Natural e da Ciência, Rua da Escola Politécnica 56/58, 1250-102 Lisbon, Portugal
| | - Maria Teresa Ferreira
- University of Lisbon, School of Agriculture, Forest Research Centre, Tapada da Ajuda, 1349-017 Lisbon, Portugal
| | - Pedro Segurado
- University of Lisbon, School of Agriculture, Forest Research Centre, Tapada da Ajuda, 1349-017 Lisbon, Portugal
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Clavero M, Ninyerola M, Hermoso V, Filipe AF, Pla M, Villero D, Brotons L, Delibes M. Historical citizen science to understand and predict climate-driven trout decline. Proc Biol Sci 2017; 284:rspb.2016.1979. [PMID: 28077766 DOI: 10.1098/rspb.2016.1979] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2016] [Accepted: 11/30/2016] [Indexed: 11/12/2022] Open
Abstract
Historical species records offer an excellent opportunity to test the predictive ability of range forecasts under climate change, but researchers often consider that historical records are scarce and unreliable, besides the datasets collected by renowned naturalists. Here, we demonstrate the relevance of biodiversity records developed through citizen-science initiatives generated outside the natural sciences academia. We used a Spanish geographical dictionary from the mid-nineteenth century to compile over 10 000 freshwater fish records, including almost 4 000 brown trout (Salmo trutta) citations, and constructed a historical presence-absence dataset covering over 2 000 10 × 10 km cells, which is comparable to present-day data. There has been a clear reduction in trout range in the past 150 years, coinciding with a generalized warming. We show that current trout distribution can be accurately predicted based on historical records and past and present values of three air temperature variables. The models indicate a consistent decline of average suitability of around 25% between 1850s and 2000s, which is expected to surpass 40% by the 2050s. We stress the largely unexplored potential of historical species records from non-academic sources to open new pathways for long-term global change science.
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Affiliation(s)
- Miguel Clavero
- Estación Biológica de Doñana-CSIC, Américo Vespucio s.n., 41092 Sevilla, Spain
| | - Miquel Ninyerola
- Dep. Biologia Animal, Vegetal i Ecologia, Autonomous University of Barcelona, 08193 Cerdanyola del Vallés, Spain
| | - Virgilio Hermoso
- Forest Sciences Centre of Catalonia (CEMFOR-CTFC), InForest Joint Research Unit (CSIC-CTFC-CREAF), Crta. Sant Llorenç de Morunys, Km 2, 25280 Solsona, Spain
| | - Ana Filipa Filipe
- CIBIO/InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos da Universidade do Porto, Campus Agrário de Vairão, R. Padre Armando Quintas, 4485-661 Vairão, Portugal
| | - Magda Pla
- Forest Sciences Centre of Catalonia (CEMFOR-CTFC), InForest Joint Research Unit (CSIC-CTFC-CREAF), Crta. Sant Llorenç de Morunys, Km 2, 25280 Solsona, Spain
| | - Daniel Villero
- Forest Sciences Centre of Catalonia (CEMFOR-CTFC), InForest Joint Research Unit (CSIC-CTFC-CREAF), Crta. Sant Llorenç de Morunys, Km 2, 25280 Solsona, Spain
| | - Lluís Brotons
- Forest Sciences Centre of Catalonia (CEMFOR-CTFC), InForest Joint Research Unit (CSIC-CTFC-CREAF), Crta. Sant Llorenç de Morunys, Km 2, 25280 Solsona, Spain.,CREAF, 08193 Cerdanyola del Vallés, Spain.,CSIC, 08193 Cerdanyola del Vallés, Spain
| | - Miguel Delibes
- Estación Biológica de Doñana-CSIC, Américo Vespucio s.n., 41092 Sevilla, Spain
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