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Günther A, Haverkamp S, Irsen S, Watkins PV, Dedek K, Mouritsen H, Briggman KL. Species-specific circuitry of double cone photoreceptors in two avian retinas. Commun Biol 2024; 7:992. [PMID: 39143253 PMCID: PMC11325025 DOI: 10.1038/s42003-024-06697-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2024] [Accepted: 08/07/2024] [Indexed: 08/16/2024] Open
Abstract
In most avian retinas, double cones (consisting of a principal and accessory member) outnumber other photoreceptor types and have been associated with various functions, such as encoding luminance, sensing polarized light, and magnetoreception. However, their down-stream circuitry is poorly understood, particularly across bird species. Analysing species differences is important to understand changes in circuitry driven by ecological adaptations. We compare the ultrastructure of double cones and their postsynaptic bipolar cells between a night-migratory European robin and non-migratory chicken. We discover four previously unidentified bipolar cell types in the European robin retina, including midget-like bipolar cells mainly connected to one principal member. A downstream ganglion cell reveals a complete midget-like circuit similar to a circuit in the peripheral primate retina. Additionally, we identify a selective circuit transmitting information from a specific subset of accessory members. Our data highlight species-specific differences in double cone to bipolar cell connectivity, potentially reflecting ecological adaptations.
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Affiliation(s)
- Anja Günther
- Department of Computational Neuroethology, Max Planck Institute for Neurobiology of Behavior-caesar, Bonn, Germany.
| | - Silke Haverkamp
- Department of Computational Neuroethology, Max Planck Institute for Neurobiology of Behavior-caesar, Bonn, Germany
| | - Stephan Irsen
- Electron Microscopy and Analytics, Max Planck Institute for Neurobiology of Behavior-caesar, Bonn, Germany
| | - Paul V Watkins
- Department of Computational Neuroethology, Max Planck Institute for Neurobiology of Behavior-caesar, Bonn, Germany
| | - Karin Dedek
- Animal Navigation/Neurosensorics Group, Institute for Biology and Environmental Sciences, Carl von Ossietzky Universität Oldenburg, Carl-von-Ossietzky-Straße 9-11, Oldenburg, Germany
- Research Centre for Neurosensory Sciences, Carl von Ossietzky University of Oldenburg, Carl-von-Ossietzky-Straße 9-11, Oldenburg, Germany
| | - Henrik Mouritsen
- Animal Navigation/Neurosensorics Group, Institute for Biology and Environmental Sciences, Carl von Ossietzky Universität Oldenburg, Carl-von-Ossietzky-Straße 9-11, Oldenburg, Germany
- Research Centre for Neurosensory Sciences, Carl von Ossietzky University of Oldenburg, Carl-von-Ossietzky-Straße 9-11, Oldenburg, Germany
| | - Kevin L Briggman
- Department of Computational Neuroethology, Max Planck Institute for Neurobiology of Behavior-caesar, Bonn, Germany.
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2
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Loew ER, Browman HI. In memoriam - Craig W. Hawryshyn (1954-2023). J Exp Biol 2024; 227:jeb247161. [PMID: 38164713 DOI: 10.1242/jeb.247161] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2024]
Affiliation(s)
- Ellis R Loew
- Cornell University, Department of Biomedical Sciences, T4-018 VRT, Ithaca, New York, 14853USA
| | - Howard I Browman
- Institute of Marine Research, Ecosystem Acoustics Group, Austevoll Research Station, Sauganeset 16, 5392 Storebø, Norway
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3
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Jenkinson E, Alexander AJ, Camp PJ. Measurements of large optical rotary dispersion in the adipose eyelid of Atlantic mackerel ( Scomber scombrus). J R Soc Interface 2023; 20:20230025. [PMID: 37015263 PMCID: PMC10072936 DOI: 10.1098/rsif.2023.0025] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/06/2023] Open
Abstract
Collagen is the most prevalent of Nature's structural proteins, and is found in the extracellular matrices of animals. The structures of collagen molecules and aggregates are chiral, which leads to the rotation of transmitted, plane-polarized light. Here, it is shown that the concentrations of chiral molecules and aggregates in the optically transparent, adipose eyelid of Atlantic mackerel (Scomber scombrus) can be so high, that plane-polarized light in the visible spectrum is rotated by tens to hundreds of degrees, depending on wavelength (the optical rotatory dispersion (ORD)). This gives rise to intensely coloured images of eyelid samples when illuminated with white light and viewed between crossed polarizers. The ORD in the visible spectrum is measured with monochromatic light sources, and using this dispersion, the variation of optical thickness within a sample (proportional to collagen concentration and path length) is determined. The agreement between observed and simulated white-light images is almost perfect. While collagen provides vital mechanical rigidity to animal tissue, it might also possess optical properties that are useful for vision and camouflage.
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Affiliation(s)
- Euan Jenkinson
- School of Chemistry, University of Edinburgh, David Brewster Road, Edinburgh EH9 3FJ, Scotland
| | - Andrew J Alexander
- School of Chemistry, University of Edinburgh, David Brewster Road, Edinburgh EH9 3FJ, Scotland
| | - Philip J Camp
- School of Chemistry, University of Edinburgh, David Brewster Road, Edinburgh EH9 3FJ, Scotland
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4
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Li T, Jiang Y, Yang X, Li H, Gong Z, Qin Y, Zhang J, Lu R, Wei G, Wu Y, Lu C. The effects of circularly polarized light on mating behavior and gene expression in Anomala corpulenta (Coleoptera: Scarabaeidae). Front Physiol 2023; 14:1172542. [PMID: 37064909 PMCID: PMC10102372 DOI: 10.3389/fphys.2023.1172542] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2023] [Accepted: 03/15/2023] [Indexed: 04/03/2023] Open
Abstract
Light is an important abiotic factor affecting insect behavior. In nature, linearly polarized light is common, but circularly polarized light is rare. Left circularly polarized (LCP) light is selectively reflected by the exocuticle of most scarab beetles, including Anomala corpulenta. Despite our previous research showing that this visual signal probably mediates their mating behavior, the way in which it does so is not well elucidated. In this study, we investigated how LCP light affects not only mating behavior but also gene expression in this species using RNA-seq. The results indicated that disruption of LCP light reflection by females of A. corpulenta probably affects the process by which males of A. corpulenta search for mates. Furthermore, the RNA-seq results showed that genes of the environmental signaling pathways and also of several insect reproduction-related amino acid metabolic pathways were differentially expressed in groups exposed and not exposed to LCP light. This implies that A. corpulenta reproduction is probably regulated by LCP light-induced stress. Herein, the results show that LCP light is probably perceived by males of the species, further mediating their mating behavior. However, this hypothesis needs future verification with additional samples.
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Affiliation(s)
- Tong Li
- Henan Key Laboratory of Crop Pest Control, Key Laboratory of Integrated Pest Management on Crops in Southern Region of North China, Institute of Plant Protection, Henan Academy of Agricultural Sciences, Zhengzhou, China
| | - Yueli Jiang
- Henan Key Laboratory of Crop Pest Control, Key Laboratory of Integrated Pest Management on Crops in Southern Region of North China, Institute of Plant Protection, Henan Academy of Agricultural Sciences, Zhengzhou, China
| | - Xiaofan Yang
- Plant Protection Institute, Hebei Academy of Agricultural and Forestry Sciences, Baoding, China
| | - Huiling Li
- Henan Key Laboratory of Crop Pest Control, Key Laboratory of Integrated Pest Management on Crops in Southern Region of North China, Institute of Plant Protection, Henan Academy of Agricultural Sciences, Zhengzhou, China
| | - Zhongjun Gong
- Henan Key Laboratory of Crop Pest Control, Key Laboratory of Integrated Pest Management on Crops in Southern Region of North China, Institute of Plant Protection, Henan Academy of Agricultural Sciences, Zhengzhou, China
| | - Yifan Qin
- Henan Key Laboratory of Crop Pest Control, Key Laboratory of Integrated Pest Management on Crops in Southern Region of North China, Institute of Plant Protection, Henan Academy of Agricultural Sciences, Zhengzhou, China
| | - Jing Zhang
- Henan Key Laboratory of Crop Pest Control, Key Laboratory of Integrated Pest Management on Crops in Southern Region of North China, Institute of Plant Protection, Henan Academy of Agricultural Sciences, Zhengzhou, China
| | - Ruijie Lu
- Henan Key Laboratory of Crop Pest Control, Key Laboratory of Integrated Pest Management on Crops in Southern Region of North China, Institute of Plant Protection, Henan Academy of Agricultural Sciences, Zhengzhou, China
| | - Guoshu Wei
- College of Plant Protection, Hebei Agricultural University, Baoding, Hebei, China
| | - Yuqing Wu
- Henan Key Laboratory of Crop Pest Control, Key Laboratory of Integrated Pest Management on Crops in Southern Region of North China, Institute of Plant Protection, Henan Academy of Agricultural Sciences, Zhengzhou, China
- *Correspondence: Yuqing Wu, ; Chuantao Lu,
| | - Chuantao Lu
- Henan Key Laboratory of Crop Pest Control, Key Laboratory of Integrated Pest Management on Crops in Southern Region of North China, Institute of Plant Protection, Henan Academy of Agricultural Sciences, Zhengzhou, China
- *Correspondence: Yuqing Wu, ; Chuantao Lu,
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5
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Chetverikova R, Dautaj G, Schwigon L, Dedek K, Mouritsen H. Double cones in the avian retina form an oriented mosaic which might facilitate magnetoreception and/or polarized light sensing. J R Soc Interface 2022; 19:20210877. [PMID: 35414212 PMCID: PMC9006000 DOI: 10.1098/rsif.2021.0877] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
To navigate between breeding and wintering grounds, night-migratory songbirds are aided by a light-dependent magnetic compass sense and maybe also by polarized light vision. Although the underlying mechanisms for magnetoreception and polarized light sensing remain unclear, double cone photoreceptors in the avian retina have been suggested to represent the primary sensory cells. To use these senses, birds must be able to separate the directional information from the Earth's magnetic field and/or light polarization from variations in light intensity. Theoretical considerations suggest that this could be best achieved if neighbouring double cones were oriented in an ordered pattern. Therefore, we investigate the orientation patterns of double cones in European robins (Erithacus rubecula) and domestic chickens (Gallus gallus domesticus). We used whole-mounted retinas labelled with double cone markers to quantify the orientations of individual double cones in relation to their nearest neighbours. In both species, our data show that the double cone array is highly ordered: the angles between neighbouring double cones were more likely to be 90°/-90° in the central retina and 180°/0° in the peripheral retina, respectively. The observed regularity in double cone orientation could aid the cells' putative function in light-dependent magnetoreception and/or polarized light sensing.
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Affiliation(s)
- Raisa Chetverikova
- Animal Navigation/Neurosensorics Group, Institute for Biology and Environmental Sciences, University of Oldenburg, Oldenburg, Germany
| | - Glen Dautaj
- Animal Navigation/Neurosensorics Group, Institute for Biology and Environmental Sciences, University of Oldenburg, Oldenburg, Germany
| | - Leonard Schwigon
- Animal Navigation/Neurosensorics Group, Institute for Biology and Environmental Sciences, University of Oldenburg, Oldenburg, Germany
| | - Karin Dedek
- Animal Navigation/Neurosensorics Group, Institute for Biology and Environmental Sciences, University of Oldenburg, Oldenburg, Germany.,Research Center Neurosensory Science, University of Oldenburg, Oldenburg, Germany
| | - Henrik Mouritsen
- Animal Navigation/Neurosensorics Group, Institute for Biology and Environmental Sciences, University of Oldenburg, Oldenburg, Germany.,Research Center Neurosensory Science, University of Oldenburg, Oldenburg, Germany
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6
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7
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Kagel SM, Garcia M, Cummings ME, Gruev V, Brady PC. Comparison of the polarization contrast of gelatinous zooplankton and a transparent single-use plastic bag-Implications for marine animals. MARINE POLLUTION BULLETIN 2021; 168:112438. [PMID: 33991983 DOI: 10.1016/j.marpolbul.2021.112438] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/28/2020] [Revised: 04/25/2021] [Accepted: 04/26/2021] [Indexed: 06/12/2023]
Abstract
Plastic pollution in the ocean is an increasingly detrimental issue for marine organisms. As a form of polarized light pollution, transparent plastic debris may be more visible and pose additional threats to organisms that can detect and interpret polarized light. Plastic can mimic the visual features of common marine prey items, such as transparent gelatinous zooplankton, which may lead to more significant plastic ingestion. We measured, in situ, the polarization and radiance contrast between a transparent plastic bag and gelatinous zooplankton with an underwater video polarimeter. The plastic bag had significantly higher polarization contrast than the gelatinous zooplankton, yet both shared similar radiance contrasts. This higher polarization contrast may contribute to the observed high ingestion rates of transparent plastic by marine organisms. Further study into the connection between polarization-sensitive organisms and plastic ingestion is recommended.
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Affiliation(s)
- Samantha M Kagel
- University of Texas at Austin, Department of Integrative Biology, Austin, TX 78712, USA.
| | - Missael Garcia
- University of Illinois at Urbana-Champaign, Department of Electrical and Computer Engineering, Urbana, IL 61801, USA
| | - Molly E Cummings
- University of Texas at Austin, Department of Integrative Biology, Austin, TX 78712, USA
| | - Viktor Gruev
- University of Illinois at Urbana-Champaign, Department of Electrical and Computer Engineering, Urbana, IL 61801, USA; University of Illinois at Urbana-Champaign, Beckman Institute for Advanced Science and Technology, Urbana, IL 61801, USA
| | - Parrish C Brady
- University of Texas at Austin, Department of Integrative Biology, Austin, TX 78712, USA
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8
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Mäthger LM, Zhao K, Herbst L. Photoreceptors in skate are arranged to allow for a broad horizontal field of view. J Comp Neurol 2021; 529:1184-1197. [PMID: 32840869 DOI: 10.1002/cne.25014] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2020] [Revised: 07/27/2020] [Accepted: 08/05/2020] [Indexed: 11/10/2022]
Abstract
Studying retinal specializations offers insights into eye functionality and visual ecology. Using light microscopic techniques, including retinal whole-mounts, we investigated photoreceptor densities in the retina of the skate Leucoraja erinacea. We show that photoreceptors are not sized or oriented in the same way, and that they are not evenly distributed across the retina. There was a dorsally located horizontal visual streak with increased photoreceptor density, with additional local maxima in which densities were highest. Photoreceptors were longest and thinnest inside this visual streak, becoming shorter and thicker toward the periphery and toward the ventral retina. Furthermore, in the peripheral retinal parts, photoreceptors (particularly the outer segments) were noticeably tilted with respect to the retinal long axis. In order to understand how photoreceptors are tilted inside the eye, we used computerized tomography (CT) and micro-CT, to obtain geometrical dimensions of the whole skate eye. These CT/micro-CT data provided us with the outlines of the skate eye and the location of the retina and this enabled us to reconstruct how photoreceptors tilt in an intact eye. Findings were analyzed relative to previously published ganglion cell distributions in this species, showing a posteriorly located retinal area with photoreceptor: ganglion cell convergence as low as 39:1. Some peripheral areas showed ratios as high as 391:1. We frame our findings in terms of the animal's anatomy: body and eye shape, specifically the location of the tapetum, as well as the visual demands associated with lifestyle and habitat type. A speculative function in polarization sensitivity is discussed.
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Affiliation(s)
- Lydia M Mäthger
- Marine Biological Laboratory, Bell Center, Woods Hole, Massachusetts, USA
| | - Kevin Zhao
- Marine Biological Laboratory, Bell Center, Woods Hole, Massachusetts, USA.,Biological Sciences Division, University of Chicago, Chicago, Illinois, USA
| | - Lena Herbst
- Marine Biological Laboratory, Bell Center, Woods Hole, Massachusetts, USA.,Department of Microbiology, University of Massachusetts, Amherst, Massachusetts, USA
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9
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Long-distance navigation and magnetoreception in migratory animals. Nature 2018; 558:50-59. [PMID: 29875486 DOI: 10.1038/s41586-018-0176-1] [Citation(s) in RCA: 230] [Impact Index Per Article: 38.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2017] [Accepted: 04/13/2018] [Indexed: 11/08/2022]
Abstract
For centuries, humans have been fascinated by how migratory animals find their way over thousands of kilometres. Here, I review the mechanisms used in animal orientation and navigation with a particular focus on long-distance migrants and magnetoreception. I contend that any long-distance navigational task consists of three phases and that no single cue or mechanism will enable animals to navigate with pinpoint accuracy over thousands of kilometres. Multiscale and multisensory cue integration in the brain is needed. I conclude by raising twenty important mechanistic questions related to long-distance animal navigation that should be solved over the next twenty years.
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10
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Shabayek AER, Morel O, Fofi D. Bio-Inspired Polarization Vision Techniques for Robotics Applications. COMPUTER VISION 2018:421-457. [DOI: 10.4018/978-1-5225-5204-8.ch017] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/01/2023]
Abstract
Researchers have been inspired by nature to build the next generation of smart robots. Based on the mechanisms adopted by the animal kingdom, research teams have developed solutions to common problems that autonomous robots faced while performing basic tasks. Polarization-based behaviour is one of the most distinctive features of some species of the animal kingdom. Light polarization parameters significantly expand visual capabilities of autonomous robots. Polarization vision can be used for most tasks of color vision, like object recognition, contrast enhancement, camouflage breaking, and signal detection and discrimination. In this chapter, the authors briefly cover polarization-based visual behavior in the animal kingdom. Then, they go in depth with bio-inspired applications based on polarization in computer vision and robotics. The aim is to have a comprehensive survey highlighting the key principles of polarization-based techniques and how they are biologically inspired.
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11
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Abstract
ABSTRACT
Ultraviolet (UV) light occupies the spectral range of wavelengths slightly shorter than those visible to humans. Because of its shorter wavelength, it is more energetic (and potentially more photodamaging) than ‘visible light’, and it is scattered more efficiently in air and water. Until 1990, only a few animals were recognized as being sensitive to UV light, but we now know that a great diversity, possibly even the majority, of animal species can visually detect and respond to it. Here, we discuss the history of research on biological UV photosensitivity and review current major research trends in this field. Some animals use their UV photoreceptors to control simple, innate behaviors, but most incorporate their UV receptors into their general sense of vision. They not only detect UV light but recognize it as a separate color in light fields, on natural objects or living organisms, or in signals displayed by conspecifics. UV visual pigments are based on opsins, the same family of proteins that are used to detect light in conventional photoreceptors. Despite some interesting exceptions, most animal species have a single photoreceptor class devoted to the UV. The roles of UV in vision are manifold, from guiding navigation and orientation behavior, to detecting food and potential predators, to supporting high-level tasks such as mate assessment and intraspecific communication. Our current understanding of UV vision is restricted almost entirely to two phyla: arthropods and chordates (specifically, vertebrates), so there is much comparative work to be done.
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Affiliation(s)
- Thomas W. Cronin
- Department of Biological Sciences, University of Maryland Baltimore County, Baltimore, MD 21250, USA
| | - Michael J. Bok
- Lund University, Department of Biology, Sölvegatan 35, Lund 223 62, Sweden
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12
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Brady P, Gilerson A, Kattawar G, Sullivan J, Twardowski M, Dierssen H, Cummings M. Response to Comment on "Open-ocean fish reveal an omnidirectional solution to camouflage in polarized environments". Science 2016; 353:552. [PMID: 27493177 DOI: 10.1126/science.aaf5018] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2016] [Accepted: 06/20/2016] [Indexed: 11/02/2022]
Abstract
Cronin et al take issue with our evidence for polarocryptic carangid fish based on concerns of pseudoreplication, our contrast metric, and habitat. We clarify (i) the importance of camouflage in near-surface open ocean environments and (ii) the use of a Stokes contrast metric and further (iii) conduct individual-based statistics on our data set to confirm the reported polarocrypsis patterns.
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Affiliation(s)
- Parrish Brady
- Department of Integrative Biology, University of Texas, Austin, TX 78712, USA
| | - Alex Gilerson
- Optical Remote Sensing Laboratory, City College of New York-CUNY, New York, NY 10031, USA
| | - George Kattawar
- Department of Physics and Astronomy and Institute for Quantum Science and Engineering, Texas A&M University, College Station, TX 77843-4242, USA
| | - Jim Sullivan
- Harbor Branch Oceanographic Institute, Florida Atlantic University, Ft. Pierce, FL 34946, USA
| | - Mike Twardowski
- Harbor Branch Oceanographic Institute, Florida Atlantic University, Ft. Pierce, FL 34946, USA
| | - Heidi Dierssen
- Department of Marine Sciences, University of Connecticut Avery Point, 1080 Shennecossett Road, Groton, CT 06340-6048, USA
| | - Molly Cummings
- Department of Integrative Biology, University of Texas, Austin, TX 78712, USA.
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Kondrashev S, Kornienko M, Gnyubkina V, Frolova L. Intraretinal variability and specialization of cones in Japanese anchovy (Engraulis japonicus, Engraulidae). J Morphol 2016; 277:472-81. [DOI: 10.1002/jmor.20511] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2015] [Revised: 12/08/2015] [Accepted: 01/02/2016] [Indexed: 11/11/2022]
Affiliation(s)
- S.L. Kondrashev
- A.V. Zhirmunsky Institute of Marine Biology, Far Eastern Branch of the Russian Academy of Sciences; Vladivostok 690041 Russia
| | - M.S. Kornienko
- A.V. Zhirmunsky Institute of Marine Biology, Far Eastern Branch of the Russian Academy of Sciences; Vladivostok 690041 Russia
| | - V.P. Gnyubkina
- A.V. Zhirmunsky Institute of Marine Biology, Far Eastern Branch of the Russian Academy of Sciences; Vladivostok 690041 Russia
| | - L.T. Frolova
- A.V. Zhirmunsky Institute of Marine Biology, Far Eastern Branch of the Russian Academy of Sciences; Vladivostok 690041 Russia
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Gu Y, Carrizo C, Gilerson AA, Brady PC, Cummings ME, Twardowski MS, Sullivan JM, Ibrahim AI, Kattawar GW. Polarimetric imaging and retrieval of target polarization characteristics in underwater environment. APPLIED OPTICS 2016; 55:626-637. [PMID: 26835939 DOI: 10.1364/ao.55.000626] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
Polarized light fields contain more information than simple irradiance and such capabilities provide an advanced tool for underwater imaging. The concept of the beam spread function (BSF) for analysis of scalar underwater imaging was extended to a polarized BSF which considers polarization. The following studies of the polarized BSF in an underwater environment through Monte Carlo simulations and experiments led to a simplified underwater polarimetric imaging model. With the knowledge acquired in the analysis of the polarimetric imaging formation process of a manmade underwater target with known polarization properties, a method to extract the inherent optical properties of the water and to retrieve polarization characteristics of the target was explored. The proposed method for retrieval of underwater target polarization characteristics should contribute to future efforts to reveal the underlying mechanism of polarization camouflage possessed by marine animals and finally to generalize guidelines for creating engineered surfaces capable of similar polarization camouflage abilities in an underwater environment.
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15
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Circularly Polarized Light as a Communication Signal in Mantis Shrimps. Curr Biol 2015; 25:3074-8. [DOI: 10.1016/j.cub.2015.10.047] [Citation(s) in RCA: 48] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2015] [Revised: 09/24/2015] [Accepted: 10/22/2015] [Indexed: 11/23/2022]
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16
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York RA, Patil C, Hulsey CD, Streelman JT, Fernald RD. Evolution of bower building in Lake Malawi cichlid fish: phylogeny, morphology, and behavior. Front Ecol Evol 2015. [DOI: 10.3389/fevo.2015.00018] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023] Open
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17
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Shabayek AER, Morel O, Fofi D. Bio-Inspired Polarization Vision Techniques for Robotics Applications. ADVANCES IN COMPUTATIONAL INTELLIGENCE AND ROBOTICS 2015:81-117. [DOI: 10.4018/978-1-4666-7387-8.ch005] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/02/2023]
Abstract
Researchers have been inspired by nature to build the next generation of smart robots. Based on the mechanisms adopted by the animal kingdom, research teams have developed solutions to common problems that autonomous robots faced while performing basic tasks. Polarization-based behaviour is one of the most distinctive features of some species of the animal kingdom. Light polarization parameters significantly expand visual capabilities of autonomous robots. Polarization vision can be used for most tasks of color vision, like object recognition, contrast enhancement, camouflage breaking, and signal detection and discrimination. In this chapter, the authors briefly cover polarization-based visual behavior in the animal kingdom. Then, they go in depth with bio-inspired applications based on polarization in computer vision and robotics. The aim is to have a comprehensive survey highlighting the key principles of polarization-based techniques and how they are biologically inspired.
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18
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Melgar J, Lind O, Muheim R. No response to linear polarization cues in operant conditioning experiments with zebra finches. J Exp Biol 2015; 218:2049-54. [DOI: 10.1242/jeb.122309] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2015] [Accepted: 04/27/2015] [Indexed: 11/20/2022]
Abstract
Many animals can use the polarization of light in various behavioural contexts. Birds are well known to use information from the skylight polarization pattern for orientation and compass calibration. Still, there are few controlled studies of polarization vision in birds, and the majority of them have not been successful in convincingly demonstrating polarization vision. We used a two-alternative forced choice conditioning approach to assess linear polarization vision in male zebra finches in the “visible” spectral range (wavelengths>400 nm). The birds were trained to discriminate colour, brightness, and polarization stimuli presented on either one of two LCD-screens. All birds were able to discriminate the colour and brightness stimuli, but they were unable to discriminate the polarization stimuli. Our results suggest that in the behavioural context studied here, zebra finches are not able to discriminate polarized light stimuli.
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Affiliation(s)
- Julian Melgar
- Lund Vision Group, Department of Biology, Lund University, Biology Building B, Sölvegatan 35, SE-223 62 Lund, Sweden
| | - Olle Lind
- Lund Vision Group, Department of Biology, Lund University, Biology Building B, Sölvegatan 35, SE-223 62 Lund, Sweden
- Cognitive Science, Department of Philosophy, Lund University, LUX, Helgonavägen 3, SE-223 62 Lund, Sweden
| | - Rachel Muheim
- Lund Vision Group, Department of Biology, Lund University, Biology Building B, Sölvegatan 35, SE-223 62 Lund, Sweden
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Abstract
Polarization of light, and visual sensitivity to it, is pervasive across aquatic and terrestrial environments. Documentation of invertebrate use of polarized light is widespread from navigation and foraging to species recognition. However, studies demonstrating that polarization body patterning serves as a communication signal (e.g., with evidence of changes in receiver behavior) are rare among invertebrate taxa and conspicuously absent among vertebrates. Here, we investigate polarization-mediated communication by northern swordtails, Xiphophorus nigrensis, using a custom-built videopolarimeter to measure polarization signals and an experimental paradigm that manipulates polarization signals without modifying their brightness or color. We conducted mate choice trials in an experimental tank that illuminates a pair of males with light passed through a polarization filter and a diffusion filter. By alternating the order of these filters between males, we presented females with live males that differed in polarization reflectance by >200% but with intensity and color differences below detection thresholds (∼5%). Combining videopolarimetry and polarization-manipulated mate choice trials, we found sexually dimorphic polarized reflectance and polarization-dependent female mate choice behavior with no polarization-dependent courtship behavior by males. Male swordtails exhibit greater within-body and body-to-background polarization contrast than females, and females preferentially associate with high-polarization-reflecting males. We also found limited support that males increase polarization contrast in social conditions over asocial conditions. Polarization cues in mate choice contexts may provide aquatic vertebrates with enhanced detection of specific display features (e.g., movements, angular information), as well as a signaling mechanism that may enhance detection by intended viewers while minimizing detection by others.
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Velez MM, Gohl D, Clandinin TR, Wernet MF. Differences in Neural Circuitry Guiding Behavioral Responses to Polarized light Presented to Either the Dorsal or Ventral Retina inDrosophila. J Neurogenet 2014; 28:348-60. [DOI: 10.3109/01677063.2014.922556] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
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21
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Brown C. Fish intelligence, sentience and ethics. Anim Cogn 2014; 18:1-17. [PMID: 24942105 DOI: 10.1007/s10071-014-0761-0] [Citation(s) in RCA: 132] [Impact Index Per Article: 13.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2013] [Revised: 05/07/2014] [Accepted: 05/19/2014] [Indexed: 01/21/2023]
Abstract
Fish are one of the most highly utilised vertebrate taxa by humans; they are harvested from wild stocks as part of global fishing industries, grown under intensive aquaculture conditions, are the most common pet and are widely used for scientific research. But fish are seldom afforded the same level of compassion or welfare as warm-blooded vertebrates. Part of the problem is the large gap between people's perception of fish intelligence and the scientific reality. This is an important issue because public perception guides government policy. The perception of an animal's intelligence often drives our decision whether or not to include them in our moral circle. From a welfare perspective, most researchers would suggest that if an animal is sentient, then it can most likely suffer and should therefore be offered some form of formal protection. There has been a debate about fish welfare for decades which centres on the question of whether they are sentient or conscious. The implications for affording the same level of protection to fish as other vertebrates are great, not least because of fishing-related industries. Here, I review the current state of knowledge of fish cognition starting with their sensory perception and moving on to cognition. The review reveals that fish perception and cognitive abilities often match or exceed other vertebrates. A review of the evidence for pain perception strongly suggests that fish experience pain in a manner similar to the rest of the vertebrates. Although scientists cannot provide a definitive answer on the level of consciousness for any non-human vertebrate, the extensive evidence of fish behavioural and cognitive sophistication and pain perception suggests that best practice would be to lend fish the same level of protection as any other vertebrate.
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Affiliation(s)
- Culum Brown
- Department of Biological Sciences, Macquarie University, Sydney, 2109, Australia,
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Velez MM, Wernet MF, Clark DA, Clandinin TR. Walking Drosophila align with the e-vector of linearly polarized light through directed modulation of angular acceleration. J Comp Physiol A Neuroethol Sens Neural Behav Physiol 2014; 200:603-14. [PMID: 24810784 PMCID: PMC4500532 DOI: 10.1007/s00359-014-0910-6] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2013] [Revised: 04/01/2014] [Accepted: 04/07/2014] [Indexed: 11/27/2022]
Abstract
Understanding the mechanisms that link sensory stimuli to animal behavior is a central challenge in neuroscience. The quantitative description of behavioral responses to defined stimuli has led to a rich understanding of different behavioral strategies in many species. One important navigational cue perceived by many vertebrates and insects is the e-vector orientation of linearly polarized light. Drosophila manifests an innate orientation response to this cue ('polarotaxis'), aligning its body axis with the e-vector field. We have established a population-based behavioral paradigm for the genetic dissection of neural circuits guiding polarotaxis to both celestial as well as reflected polarized stimuli. However, the behavioral mechanisms by which flies align with a linearly polarized stimulus remain unknown. Here, we present a detailed quantitative description of Drosophila polarotaxis, systematically measuring behavioral parameters that are modulated by the stimulus. We show that angular acceleration is modulated during alignment, and this single parameter may be sufficient for alignment. Furthermore, using monocular deprivation, we show that each eye is necessary for modulating turns in the ipsilateral direction. This analysis lays the foundation for understanding how neural circuits guide these important visual behaviors.
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Affiliation(s)
- Mariel M. Velez
- Department of neurobiology, Stanford University, Stanford, CA 94305, USA
| | - Mathias F. Wernet
- Department of neurobiology, Stanford University, Stanford, CA 94305, USA
| | - Damon A. Clark
- Department of neurobiology, Stanford University, Stanford, CA 94305, USA
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Abstract
Polarization sensitivity (PS) in vertebrate vision is controversial, perhaps because its underlying mechanism has remained obscure. An issue that might have added to the controversy is that rainbow trout (Oncorhynchus mykiss), which have served as the primary model system for polarization-based orientation, lose their ability to orient relative to celestial polarized-light patterns when parr (fry) transform into migratory smolts (juveniles), which would benefit most from polarization-based orientation. Here we addressed two key questions: (1) what is the mechanism underling PS?, and (2) how can the paradoxical loss of PS in trout smolts be reconciled? We assessed PS from optic nerve recordings in parr and smolts and found that the retinal region with enhanced PS shifted from the ventral retina in parr to the dorsal retina in smolts. This adaptation may allow fish to use the most reliable polarization field encountered at each life stage, the celestial polarization field in the shallow-swimming parr and the depth-insensitive underwater polarization field in the deep-swimming smolts. In addition, we assessed spectral sensitivity across the retina and during ontogeny and fit a cascade retinal model to PS data. We found that differential contribution of two cone detectors with orthogonal PS could drive the variation in PS and that feedback from horizontal cells to cones could explain the differential amplification of PS. This elegant arrangement, in which weak PS of cones is amplified and tuned by retinal networks, allows for PS without interfering with sampling of other visual information and illustrates how sensory systems may simultaneously process disparate aspects of physical environments.
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Polaro-cryptic mirror of the lookdown as a biological model for open ocean camouflage. Proc Natl Acad Sci U S A 2013; 110:9764-9. [PMID: 23716701 DOI: 10.1073/pnas.1222125110] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
With no object to hide behind in 3D space, the open ocean represents a challenging environment for camouflage. Conventional strategies for reflective crypsis (e.g., standard mirror) are effective against axially symmetric radiance fields associated with high solar altitudes, yet ineffective against asymmetric polarized radiance fields associated with low solar inclinations. Here we identify a biological model for polaro-crypsis. We measured the surface-reflectance Mueller matrix of live open ocean fish (lookdown, Selene vomer) and seagrass-dwelling fish (pinfish, Lagodon rhomboides) using polarization-imaging and modeling polarization camouflage for the open ocean. Lookdowns occupy the minimization basin of our polarization-contrast space, while pinfish and standard mirror measurements exhibit higher contrast values than optimal. The lookdown reflective strategy achieves significant gains in polaro-crypsis (up to 80%) in comparison with nonpolarization sensitive strategies, such as a vertical mirror. Lookdowns achieve polaro-crypsis across solar altitudes by varying reflective properties (described by 16 Mueller matrix elements m(ij)) with incident illumination. Lookdowns preserve reflected polarization aligned with principle axes (dorsal-ventral and anterior-posterior, m(22) = 0.64), while randomizing incident polarization 45° from principle axes (m(33) = -0.05). These reflectance properties allow lookdowns to reflect the uniform degree and angle of polarization associated with high-noon conditions due to alignment of the principle axes and the sun, and reflect a more complex polarization pattern at asymmetrical light fields associated with lower solar elevations. Our results suggest that polaro-cryptic strategies vary by habitat, and require context-specific depolarization and angle alteration for effective concealment in the complex open ocean environment.
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Are harbour seals (Phoca vitulina) able to perceive and use polarised light? J Comp Physiol A Neuroethol Sens Neural Behav Physiol 2012; 199:509-19. [DOI: 10.1007/s00359-012-0762-x] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2012] [Revised: 09/13/2012] [Accepted: 09/14/2012] [Indexed: 10/27/2022]
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Zebrafish respond to the geomagnetic field by bimodal and group-dependent orientation. Sci Rep 2012; 2:727. [PMID: 23061010 PMCID: PMC3468834 DOI: 10.1038/srep00727] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2012] [Accepted: 09/13/2012] [Indexed: 11/08/2022] Open
Abstract
A variety of animals use Earth's magnetic field as a reference for their orientation behaviour. Although distinctive magnetoreception mechanisms have been postulated for many migrating or homing animals, the molecular mechanisms are still undefined. In this study, we found that zebrafish, a model organism suitable for genetic manipulation, responded to a magnetic field as weak as the geomagnetic field. Without any training, zebrafish were individually released into a circular arena that was placed in an artificial geomagnetic field, and their preferred magnetic directions were recorded. Individuals from five out of the seven zebrafish groups studied, groups mostly comprised of the offspring of predetermined pairs, showed bidirectional orientation with group-specific preferences regardless of close kinships. The preferred directions did not seem to depend on gender, age or surrounding environmental factors, implying that directional preference was genetically defined. The present findings may facilitate future study on the molecular mechanisms underlying magnetoreception.
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Abstract
Eyes have evolved many times, and arthropods and vertebrates share transcription factors for early development. Moreover, the photochemistry of vision in all eyes employs an opsin and the isomerization of a retinoid from the 11-cis to the all-trans configuration. The opsins, however, have associated with several different G proteins, initiating hyperpolarizing and depolarizing conductance changes at the photoreceptor membrane. Beyond these obvious instances of homology, much of the evolutionary story is one of tinkering, producing a great variety of morphological forms and variation within functional themes. This outcome poses a central issue in the convergence of evolutionary and developmental biology: what are the heritable features in the later stages of development that give natural selection traction in altering phenotypic outcomes? This paper discusses some results of evolutionary tinkering where this question arises and, in some cases, where the reasons for particular outcomes and the role of adaptation may not be understood. Phenotypic features include: the exploitation of microvilli in rhabdomeric photoreceptors for detecting the plane of polarized light; different instances of retinoid in the visual pigment; examples of the many uses of accessory pigments in tuning the spectral sensitivity of photoreceptors; selection of opsins in tuning sensitivity in aquatic environments; employing either reflection or refraction in the optics of compound eyes; the multiple ways of constructing images in compound eyes; and the various ways of regenerating 11-cis retinals to maintain visual sensitivity. Evolution is an irreversible process, but tinkering may recover some lost functions, albeit by new mutational routes. There is both elegance and intellectual coherence to the natural processes that produce such variety and functional complexity. But marginalizing the teaching of evolution in public education is a continuing social and political problem that contributes to the reckless capacity of humans to alter the planet without trying to understand how nature works.
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Kondrashev SL, Miyazaki T, Lamash NE, Tsuchiya T. Three cone opsin genes determine the properties of the visual spectra in the Japanese anchovy Engraulis japonicus (Engraulidae, Teleostei). J Exp Biol 2012. [DOI: 10.1242/jeb.078980] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
Summary
A complement of cone visual pigments was identified in the Japanese anchovy Engraulis japonicus, one of the engraulid fish species that has a retina specialized for polarization and color vision. The nature of the chromophore bound to opsin proteins was investigated using high performance liquid chromatography (HPLC). The opsin genes were then cloned and sequenced, and the absorption spectra of different types of cones were obtained by microspectrophotometry (MSP). Two green (EJ-RH2-1, EJ-RH2-2) and one red (EJ-LWS) cone opsin genes were identified and are presumably related to the Vitamin A1-based visual pigments (i.e., rhodopsins) with λmax values of 492, 474 and 512 nm for EJ-RH2-1, EJ-RH2-2, and EJ-LWS, respectively. The long and short cones from the ventro-temporal retinal zone consisted of a pure population of RH2 class gene-based pigments (λmax value of 492 nm). The long and short cones from other retinal areas and the lateral components of the triple cones possessed a mixture of RH2 and LWS class gene-based pigments that exhibited a λmax value approximately 502 nm. The central component of the triple cones contained only RH2 class gene-based pigments (λmax value of 474 nm). Thus, E. japonicus possesses a middle-wave range of spectral sensitivity and acquires different color vision systems in distinct visual fields. .
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Stowasser A, Buschbeck EK. Electrophysiological evidence for polarization sensitivity in the camera-type eyes of the aquatic predacious insect larva, Thermonectus marmoratus (Coleoptera: Dytiscidae). J Exp Biol 2012; 215:3577-86. [DOI: 10.1242/jeb.075028] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
Summary
Polarization sensitivity has most often been studied in mature insects, yet it is likely that larvae also make use of this visual modality. The aquatic larvae of the predacious diving beetle Thermonectus marmoratus are highly successful visually guided predators, with a UV-sensitive proximal retina that, according to its ultrastructure, has three distinct cell types with anatomical attributes that are consistent with polarization sensitivity. In the present study we used electrophysiological methods and single-cell staining to confirm polarization sensitivity in the proximal retinas of both principal eyes of these larvae. As expected from their microvillar orientation, cells of type T1 are most sensitive to vertically polarized light, while cells of type T2 are most sensitive to horizontally polarized light. In addition, T3 cells likely constitute a second population of cells that are most sensitive to light with vertical e-vector orientation, characterized by shallower polarization modulations, and smaller polarization sensitivity (PS) values than are typical for T1 cells. The level of PS values found in this study suggests that polarization sensitivity likely plays an important role in the visual system of these larvae. Based on their natural history and behavior, possible functions are: (1) finding water after hatching, (2) finding the shore before pupation, and (3) making prey more visible, by filtering out horizontally polarized haze, and/or using polarization features for prey detection.
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Johnsen S, Marshall NJ, Widder EA. Polarization sensitivity as a contrast enhancer in pelagic predators: lessons from in situ polarization imaging of transparent zooplankton. Philos Trans R Soc Lond B Biol Sci 2011; 366:655-70. [PMID: 21282169 DOI: 10.1098/rstb.2010.0193] [Citation(s) in RCA: 50] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Because light in the pelagic environment is partially polarized, it has been suggested that the polarization sensitivity found in certain pelagic species may serve to enhance the contrast of their transparent zooplankton prey. We examined its potential during cruises in the Gulf of Mexico and Atlantic Ocean and at a field station on the Great Barrier Reef. First, we collected various species of transparent zooplankton and micronekton and photographed them between crossed polarizers. Many groups, particularly the cephalopods, pelagic snails, salps and ctenophores, were found to have ciliary, muscular or connective tissues with striking birefringence. In situ polarization imagery of the same species showed that, while the degree of underwater polarization was fairly high (approx. 30% in horizontal lines of sight), tissue birefringence played little to no role in increasing visibility. This is most likely due to the low radiance of the horizontal background light when compared with the downwelling irradiance. In fact, the dominant radiance and polarization contrasts are due to unpolarized downwelling light that has been scattered from the animal viewed against the darker and polarized horizontal background light. We show that relatively simple algorithms can use this negative polarization contrast to increase visibility substantially.
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Affiliation(s)
- Sönke Johnsen
- Biology Department, Duke University, Durham, NC 27708, USA.
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Marshall J, Cronin T, Wehling MF. New directions in the detection of polarized light. Philos Trans R Soc Lond B Biol Sci 2011; 366:615-6. [PMID: 21282163 DOI: 10.1098/rstb.2010.0332] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Affiliation(s)
- Justin Marshall
- The Queensland Brain Institute, University of Queensland, Brisbane, Queensland 4072, Australia.
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Pignatelli V, Temple SE, Chiou TH, Roberts NW, Collin SP, Marshall NJ. Behavioural relevance of polarization sensitivity as a target detection mechanism in cephalopods and fishes. Philos Trans R Soc Lond B Biol Sci 2011; 366:734-41. [PMID: 21282177 PMCID: PMC3049012 DOI: 10.1098/rstb.2010.0204] [Citation(s) in RCA: 54] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Aquatic habitats are rich in polarized patterns that could provide valuable information about the environment to an animal with a visual system sensitive to polarization of light. Both cephalopods and fishes have been shown to behaviourally respond to polarized light cues, suggesting that polarization sensitivity (PS) may play a role in improving target detection and/or navigation/orientation. However, while there is general agreement concerning the presence of PS in cephalopods and some fish species, its functional significance remains uncertain. Testing the role of PS in predator or prey detection seems an excellent paradigm with which to study the contribution of PS to the sensory assets of both groups, because such behaviours are critical to survival. We developed a novel experimental set-up to deliver computer-generated, controllable, polarized stimuli to free-swimming cephalopods and fishes with which we tested the behavioural relevance of PS using stimuli that evoke innate responses (such as an escape response from a looming stimulus and a pursuing behaviour of a small prey-like stimulus). We report consistent responses of cephalopods to looming stimuli presented in polarization and luminance contrast; however, none of the fishes tested responded to either the looming or the prey-like stimuli when presented in polarization contrast.
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Affiliation(s)
- Vincenzo Pignatelli
- Queensland Brain Institute, The University of Queensland, Saint Lucia, Queensland 4104, Australia.
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