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Gagnon CA, Bournival V, Koszegi M, Nantel-Fortier N, St-Sauveur VG, Provost C, Lair S. Quebec: Avian pathogens identification and genomic characterization: 2021 annual review of the Molecular Diagnostic Laboratory, Université de Montréal. THE CANADIAN VETERINARY JOURNAL = LA REVUE VETERINAIRE CANADIENNE 2022; 63:486-490. [PMID: 35502259 PMCID: PMC9009753] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Affiliation(s)
- Carl A Gagnon
- Swine and Poultry Infectious Diseases Research Center (CRIPA-FRQ) (Gagnon); Molecular Diagnostic Laboratory (MDL) of Centre de diagnostic vétérinaire de l'Université de Montréal (CDVUM) (Gagnon, Bournival, Koszegi, Nantel-Fortier, St-Sauveur, Provost); Centre québécois sur la santé des animaux sauvages (CQSAS)/Canadian Wildlife Health Cooperative (Lair); Faculté de médecine vétérinaire (FMV), Université de Montréal, St-Hyacinthe, Québec, Canada
| | - Véronique Bournival
- Swine and Poultry Infectious Diseases Research Center (CRIPA-FRQ) (Gagnon); Molecular Diagnostic Laboratory (MDL) of Centre de diagnostic vétérinaire de l'Université de Montréal (CDVUM) (Gagnon, Bournival, Koszegi, Nantel-Fortier, St-Sauveur, Provost); Centre québécois sur la santé des animaux sauvages (CQSAS)/Canadian Wildlife Health Cooperative (Lair); Faculté de médecine vétérinaire (FMV), Université de Montréal, St-Hyacinthe, Québec, Canada
| | - Marika Koszegi
- Swine and Poultry Infectious Diseases Research Center (CRIPA-FRQ) (Gagnon); Molecular Diagnostic Laboratory (MDL) of Centre de diagnostic vétérinaire de l'Université de Montréal (CDVUM) (Gagnon, Bournival, Koszegi, Nantel-Fortier, St-Sauveur, Provost); Centre québécois sur la santé des animaux sauvages (CQSAS)/Canadian Wildlife Health Cooperative (Lair); Faculté de médecine vétérinaire (FMV), Université de Montréal, St-Hyacinthe, Québec, Canada
| | - Nicolas Nantel-Fortier
- Swine and Poultry Infectious Diseases Research Center (CRIPA-FRQ) (Gagnon); Molecular Diagnostic Laboratory (MDL) of Centre de diagnostic vétérinaire de l'Université de Montréal (CDVUM) (Gagnon, Bournival, Koszegi, Nantel-Fortier, St-Sauveur, Provost); Centre québécois sur la santé des animaux sauvages (CQSAS)/Canadian Wildlife Health Cooperative (Lair); Faculté de médecine vétérinaire (FMV), Université de Montréal, St-Hyacinthe, Québec, Canada
| | - Valérie Grenier St-Sauveur
- Swine and Poultry Infectious Diseases Research Center (CRIPA-FRQ) (Gagnon); Molecular Diagnostic Laboratory (MDL) of Centre de diagnostic vétérinaire de l'Université de Montréal (CDVUM) (Gagnon, Bournival, Koszegi, Nantel-Fortier, St-Sauveur, Provost); Centre québécois sur la santé des animaux sauvages (CQSAS)/Canadian Wildlife Health Cooperative (Lair); Faculté de médecine vétérinaire (FMV), Université de Montréal, St-Hyacinthe, Québec, Canada
| | - Chantale Provost
- Swine and Poultry Infectious Diseases Research Center (CRIPA-FRQ) (Gagnon); Molecular Diagnostic Laboratory (MDL) of Centre de diagnostic vétérinaire de l'Université de Montréal (CDVUM) (Gagnon, Bournival, Koszegi, Nantel-Fortier, St-Sauveur, Provost); Centre québécois sur la santé des animaux sauvages (CQSAS)/Canadian Wildlife Health Cooperative (Lair); Faculté de médecine vétérinaire (FMV), Université de Montréal, St-Hyacinthe, Québec, Canada
| | - Stéphane Lair
- Swine and Poultry Infectious Diseases Research Center (CRIPA-FRQ) (Gagnon); Molecular Diagnostic Laboratory (MDL) of Centre de diagnostic vétérinaire de l'Université de Montréal (CDVUM) (Gagnon, Bournival, Koszegi, Nantel-Fortier, St-Sauveur, Provost); Centre québécois sur la santé des animaux sauvages (CQSAS)/Canadian Wildlife Health Cooperative (Lair); Faculté de médecine vétérinaire (FMV), Université de Montréal, St-Hyacinthe, Québec, Canada
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Pereira AC, Ramos B, Reis AC, Cunha MV. Non-Tuberculous Mycobacteria: Molecular and Physiological Bases of Virulence and Adaptation to Ecological Niches. Microorganisms 2020; 8:microorganisms8091380. [PMID: 32916931 PMCID: PMC7563442 DOI: 10.3390/microorganisms8091380] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2020] [Revised: 09/06/2020] [Accepted: 09/07/2020] [Indexed: 12/15/2022] Open
Abstract
Non-tuberculous mycobacteria (NTM) are paradigmatic colonizers of the total environment, circulating at the interfaces of the atmosphere, lithosphere, hydrosphere, biosphere, and anthroposphere. Their striking adaptive ecology on the interconnection of multiple spheres results from the combination of several biological features related to their exclusive hydrophobic and lipid-rich impermeable cell wall, transcriptional regulation signatures, biofilm phenotype, and symbiosis with protozoa. This unique blend of traits is reviewed in this work, with highlights to the prodigious plasticity and persistence hallmarks of NTM in a wide diversity of environments, from extreme natural milieus to microniches in the human body. Knowledge on the taxonomy, evolution, and functional diversity of NTM is updated, as well as the molecular and physiological bases for environmental adaptation, tolerance to xenobiotics, and infection biology in the human and non-human host. The complex interplay between individual, species-specific and ecological niche traits contributing to NTM resilience across ecosystems are also explored. This work hinges current understandings of NTM, approaching their biology and heterogeneity from several angles and reinforcing the complexity of these microorganisms often associated with a multiplicity of diseases, including pulmonary, soft-tissue, or milliary. In addition to emphasizing the cornerstones of knowledge involving these bacteria, we identify research gaps that need to be addressed, stressing out the need for decision-makers to recognize NTM infection as a public health issue that has to be tackled, especially when considering an increasingly susceptible elderly and immunocompromised population in developed countries, as well as in low- or middle-income countries, where NTM infections are still highly misdiagnosed and neglected.
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Affiliation(s)
- André C. Pereira
- Centre for Ecology, Evolution and Environmental Changes (cE3c), Faculdade de Ciências da Universidade de Lisboa, 1749-016 Lisboa, Portugal; (A.C.P.); (B.R.); (A.C.R.)
- Biosystems & Integrative Sciences Institute (BioISI), Faculdade de Ciências da Universidade de Lisboa, 1749-016 Lisboa, Portugal
| | - Beatriz Ramos
- Centre for Ecology, Evolution and Environmental Changes (cE3c), Faculdade de Ciências da Universidade de Lisboa, 1749-016 Lisboa, Portugal; (A.C.P.); (B.R.); (A.C.R.)
- Biosystems & Integrative Sciences Institute (BioISI), Faculdade de Ciências da Universidade de Lisboa, 1749-016 Lisboa, Portugal
| | - Ana C. Reis
- Centre for Ecology, Evolution and Environmental Changes (cE3c), Faculdade de Ciências da Universidade de Lisboa, 1749-016 Lisboa, Portugal; (A.C.P.); (B.R.); (A.C.R.)
- Biosystems & Integrative Sciences Institute (BioISI), Faculdade de Ciências da Universidade de Lisboa, 1749-016 Lisboa, Portugal
| | - Mónica V. Cunha
- Centre for Ecology, Evolution and Environmental Changes (cE3c), Faculdade de Ciências da Universidade de Lisboa, 1749-016 Lisboa, Portugal; (A.C.P.); (B.R.); (A.C.R.)
- Biosystems & Integrative Sciences Institute (BioISI), Faculdade de Ciências da Universidade de Lisboa, 1749-016 Lisboa, Portugal
- Correspondence: ; Tel.: +351-217-500-000 (ext. 22461)
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LEDWOŃ ALEKSANDRA, NAPIÓRKOWSKA AGNIESZKA, AUGUSTYNOWICZ- KOPEĆ EWA, SZELESZCZUK PIOTR. Drug Susceptibility of Non-tuberculous Strains of Mycobacterium Isolated from Birds from Poland. Pol J Microbiol 2019; 67:487-492. [PMID: 30550235 PMCID: PMC7256868 DOI: 10.21307/pjm-2018-057] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2018] [Revised: 09/16/2018] [Accepted: 09/17/2018] [Indexed: 11/24/2022] Open
Abstract
Mycobacterioses are a constant problem in backyard poultry, as well as pet birds. To date, no evidence of direct transmission of atypical bacilli between humans has been demonstrated, but it cannot be ruled out that sick animals can be a source of infection for people in their environment. The aim of the study was to identify mycobacteria isolated from birds with diagnosed mycobacteriosis and to determine the susceptibility of mycobacterial isolates from these animals to antituberculous drugs most commonly used in the treatment of mycobacterial infections in humans. For drug susceptibility tests, drugs such as isoniazid, rifampicin, streptomycin, ethambutol, ofloxacin, capreomycin, cycloserine and ethionamide were used. A high degree of drug resistance was demonstrated, particularly in Mycobacterium avium . Isolates of Mycobacterium xenopi showed a relatively good susceptibility to the drugs tested. The drug resistance of Mycobacterium genavense has not been determined, but this mycobacterium was identified in ten cases, which is the second most frequent occurrence in the cases studied. Mycobacterioses are a constant problem in backyard poultry, as well as pet birds. To date, no evidence of direct transmission of atypical bacilli between humans has been demonstrated, but it cannot be ruled out that sick animals can be a source of infection for people in their environment. The aim of the study was to identify mycobacteria isolated from birds with diagnosed mycobacteriosis and to determine the susceptibility of mycobacterial isolates from these animals to antituberculous drugs most commonly used in the treatment of mycobacterial infections in humans. For drug susceptibility tests, drugs such as isoniazid, rifampicin, streptomycin, ethambutol, ofloxacin, capreomycin, cycloserine and ethionamide were used. A high degree of drug resistance was demonstrated, particularly in Mycobacterium avium. Isolates of Mycobacterium xenopi showed a relatively good susceptibility to the drugs tested. The drug resistance of Mycobacterium genavense has not been determined, but this mycobacterium was identified in ten cases, which is the second most frequent occurrence in the cases studied.
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Affiliation(s)
- ALEKSANDRA LEDWOŃ
- Department of Pathology and Veterinary Diagnostics, Warsaw University of Life Sciences, Warsaw, Poland
| | - AGNIESZKA NAPIÓRKOWSKA
- Department of Microbiology, National Tuberculosis and Lung Diseases Research Institute, Warsaw, Poland
| | - EWA AUGUSTYNOWICZ- KOPEĆ
- Department of Microbiology, National Tuberculosis and Lung Diseases Research Institute, Warsaw, Poland
| | - PIOTR SZELESZCZUK
- Department of Pathology and Veterinary Diagnostics, Warsaw University of Life Sciences, Warsaw, Poland
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