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Chromatic acclimation and population dynamics of green sulfur bacteria grown with spectrally tailored light. Sci Rep 2014; 4:5057. [PMID: 24862580 PMCID: PMC4033924 DOI: 10.1038/srep05057] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2014] [Accepted: 05/06/2014] [Indexed: 11/08/2022] Open
Abstract
Living organisms have to adjust to their surrounding in order to survive in stressful conditions. We study this mechanism in one of most primitive creatures – photosynthetic green sulfur bacteria. These bacteria absorb photons very efficiently using the chlorosome antenna complexes and perform photosynthesis in extreme low-light environments. How the chlorosomes in green sulfur bacteria are acclimated to the stressful light conditions, for instance, if the spectrum of light is not optimal for absorption, is unknown. Studying Chlorobaculumtepidum cultures with far-red to near-infrared light-emitting diodes, we found that these bacteria react to changes in energy flow by regulating the amount of light-absorbing pigments and the size of the chlorosomes. Surprisingly, our results indicate that the bacteria can survive in near-infrared lights capturing low-frequency photons by the intermediate units of the light-harvesting complex. The latter strategy may be used by the species recently found near hydrothermal vents in the Pacific Ocean.
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Saga Y, Hayashi K, Mizoguchi T, Tamiaki H. Biosynthesis of bacteriochlorophyll c derivatives possessing chlorine and bromine atoms at the terminus of esterifying chains in the green sulfur bacterium Chlorobaculum tepidum. J Biosci Bioeng 2014; 118:82-7. [PMID: 24495924 DOI: 10.1016/j.jbiosc.2013.12.023] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2013] [Revised: 12/26/2013] [Accepted: 12/27/2013] [Indexed: 11/26/2022]
Abstract
The green sulfur photosynthetic bacterium Chlorobaculum tepidum newly produced BChl c derivatives possessing a chlorine or bromine atom at the terminus of the esterifying chain in the 17-propionate residue by cultivation with exogenous ω-halo-1-alkanols. The relative ratios of BChl c derivatives esterified with 8-chloro-1-octanol and 10-chloro-1-decanol were estimated to be 26.5% and 33.3% by cultivation with these ω-chloro-1-alkanols at the final concentrations of 300 and 150 μM, respectively. In contrast, smaller amounts of unnatural BChls c esterified with ω-bromo-1-alkanols were biosynthesized than those esterified with ω-chloro-1-alkanols: the ratios of BChl c derivatives esterified with 8-bromo-1-octanol and 10-bromo-1-decanol were 11.3% and 12.2% at the concentrations of 300 and 150 μM, respectively. These indicate that ω-chloro-1-alkanols can be incorporated into bacteriochlorophyllide c more than ω-bromo-1-alkanols in the BChl c biosynthetic pathway. The homolog compositions of the novel BChl c derivatives possessing a halogen atom were analogous to those of coexisting natural BChl c esterified with farnesol. These results demonstrate unique properties of BChl c synthase, BchK, which can utilize unnatural substrates containing halogen in the BChl c biosynthesis of Cba. tepidum.
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Affiliation(s)
- Yoshitaka Saga
- Department of Chemistry, Faculty of Science and Engineering, Kinki University, Higashi-Osaka, Osaka 577-8502, Japan.
| | - Keisuke Hayashi
- Department of Chemistry, Faculty of Science and Engineering, Kinki University, Higashi-Osaka, Osaka 577-8502, Japan
| | - Tadashi Mizoguchi
- Graduate School of Life Sciences, Ritsumeikan University, Kusatsu, Shiga 525-8577, Japan
| | - Hitoshi Tamiaki
- Graduate School of Life Sciences, Ritsumeikan University, Kusatsu, Shiga 525-8577, Japan
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Garcia Costas AM, Tsukatani Y, Rijpstra WIC, Schouten S, Welander PV, Summons RE, Bryant DA. Identification of the bacteriochlorophylls, carotenoids, quinones, lipids, and hopanoids of "Candidatus Chloracidobacterium thermophilum". J Bacteriol 2012; 194:1158-68. [PMID: 22210764 PMCID: PMC3294765 DOI: 10.1128/jb.06421-11] [Citation(s) in RCA: 44] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2011] [Accepted: 12/19/2011] [Indexed: 11/20/2022] Open
Abstract
"Candidatus Chloracidobacterium thermophilum" is a recently discovered chlorophototroph from the bacterial phylum Acidobacteria, which synthesizes bacteriochlorophyll (BChl) c and chlorosomes like members of the green sulfur bacteria (GSB) and the green filamentous anoxygenic phototrophs (FAPs). The pigments (BChl c homologs and carotenoids), quinones, lipids, and hopanoids of cells and chlorosomes of this new chlorophototroph were characterized in this study. "Ca. Chloracidobacterium thermophilum" methylates its antenna BChls at the C-8(2) and C-12(1) positions like GSB, but these BChls were esterified with a variety of isoprenoid and straight-chain alkyl alcohols as in FAPs. Unlike the chlorosomes of other green bacteria, "Ca. Chloracidobacterium thermophilum" chlorosomes contained two major xanthophyll carotenoids, echinenone and canthaxanthin. These carotenoids may confer enhanced protection against reactive oxygen species and could represent a specific adaptation to the highly oxic natural environment in which "Ca. Chloracidobacterium thermophilum" occurs. Dihydrogenated menaquinone-8 [menaquinone-8(H(2))], which probably acts as a quencher of energy transfer under oxic conditions, was an abundant component of both cells and chlorosomes of "Ca. Chloracidobacterium thermophilum." The betaine lipid diacylglycerylhydroxymethyl-N,N,N-trimethyl-β-alanine, esterified with 13-methyl-tetradecanoic (isopentadecanoic) acid, was a prominent polar lipid in the membranes of both "Ca. Chloracidobacterium thermophilum" cells and chlorosomes. This lipid may represent a specific adaptive response to chronic phosphorus limitation in the mats. Finally, three hopanoids, diploptene, bacteriohopanetetrol, and bacteriohopanetetrol cyclitol ether, which may help to stabilize membranes during diel shifts in pH and other physicochemical conditions in the mats, were detected in the membranes of "Ca. Chloracidobacterium thermophilum."
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Affiliation(s)
- Amaya M. Garcia Costas
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, Pennsylvania, USA
| | - Yusuke Tsukatani
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, Pennsylvania, USA
| | - W. Irene C. Rijpstra
- NIOZ Royal Netherlands Institute for Sea Research, Department of Marine Organic Biogeochemistry, Den Burg, The Netherlands
| | - Stefan Schouten
- NIOZ Royal Netherlands Institute for Sea Research, Department of Marine Organic Biogeochemistry, Den Burg, The Netherlands
| | - Paula V. Welander
- Department of Earth, Atmospheric and Planetary Science, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA
| | - Roger E. Summons
- Department of Earth, Atmospheric and Planetary Science, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA
| | - Donald A. Bryant
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, Pennsylvania, USA
- Department of Chemistry and Biochemistry, Montana State University, Bozeman, Montana, USA
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Garcia Costas AM, Tsukatani Y, Romberger SP, Oostergetel GT, Boekema EJ, Golbeck JH, Bryant DA. Ultrastructural analysis and identification of envelope proteins of "Candidatus Chloracidobacterium thermophilum" chlorosomes. J Bacteriol 2011; 193:6701-11. [PMID: 21965575 PMCID: PMC3232888 DOI: 10.1128/jb.06124-11] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2011] [Accepted: 09/23/2011] [Indexed: 11/20/2022] Open
Abstract
Chlorosomes are sac-like, light-harvesting organelles that characteristically contain very large numbers of bacteriochlorophyll (BChl) c, d, or e molecules. These antenna structures occur in chlorophototrophs belonging to some members of the Chlorobi and Chloroflexi phyla and are also found in a recently discovered member of the phylum Acidobacteria, "Candidatus Chloracidobacterium thermophilum." "Ca. Chloracidobacterium thermophilum" is the first aerobic organism discovered to possess chlorosomes as light-harvesting antennae for phototrophic growth. Chlorosomes were isolated from "Ca. Chloracidobacterium thermophilum" and subjected to electron microscopic, spectroscopic, and biochemical analyses. The chlorosomes of "Ca. Chloracidobacterium thermophilum" had an average size of ∼100 by 30 nm. Cryo-electron microscopy showed that the BChl c molecules formed folded or twisted, sheet-like structures with a lamellar spacing of ∼2.3 nm. Unlike the BChls in the chlorosomes of the green sulfur bacterium Chlorobaculum tepidum, concentric cylindrical nanotubes were not observed. Chlorosomes of "Ca. Chloracidobacterium thermophilum" contained a homolog of CsmA, the BChl a-binding, baseplate protein; CsmV, a protein distantly related to CsmI, CsmJ, and CsmX of C. tepidum, which probably binds a single [2Fe-2S] cluster; and five unique polypeptides (CsmR, CsmS, CsmT, CsmU, and a type II NADH dehydrogenase homolog). Although "Ca. Chloracidobacterium thermophilum" is an aerobe, energy transfer among the BChls in these chlorosomes was very strongly quenched in the presence of oxygen (as measured by quenching of fluorescence emission). The combined analyses showed that the chlorosomes of "Ca. Chloracidobacterium thermophilum" possess a number of unique features but also share some properties with the chlorosomes found in anaerobic members of other phyla.
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Affiliation(s)
| | | | | | - Gert T. Oostergetel
- Groningen Biomolecular Sciences and Biotechnology Institute, 9747 AG Groningen, The Netherlands
| | - Egbert J. Boekema
- Groningen Biomolecular Sciences and Biotechnology Institute, 9747 AG Groningen, The Netherlands
| | - John H. Golbeck
- Department of Biochemistry and Molecular Biology
- Department of Chemistry, The Pennsylvania State University, University Park, Pennsylvania 16802
| | - Donald A. Bryant
- Department of Biochemistry and Molecular Biology
- Department of Chemistry and Biochemistry, Montana State University, Bozeman, Montana 59717
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Nishimori R, Mizoguchi T, Tamiaki H, Kashimura S, Saga Y. Biosynthesis of Unnatural Bacteriochlorophyll c Derivatives Esterified with α,ω-Diols in the Green Sulfur Photosynthetic Bacterium Chlorobaculum tepidum. Biochemistry 2011; 50:7756-64. [DOI: 10.1021/bi200994h] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Risato Nishimori
- Department of Chemistry, Faculty
of Science and Engineering, Kinki University, Higashi-Osaka, Osaka 577-8502, Japan
| | - Tadashi Mizoguchi
- Department of Bioscience and
Biotechnology, Faculty of Science and Engineering, Ritsumeikan University, Kusatsu, Shiga 525-8577, Japan
| | - Hitoshi Tamiaki
- Department of Bioscience and
Biotechnology, Faculty of Science and Engineering, Ritsumeikan University, Kusatsu, Shiga 525-8577, Japan
| | - Shigenori Kashimura
- Department of Chemistry, Faculty
of Science and Engineering, Kinki University, Higashi-Osaka, Osaka 577-8502, Japan
| | - Yoshitaka Saga
- Department of Chemistry, Faculty
of Science and Engineering, Kinki University, Higashi-Osaka, Osaka 577-8502, Japan
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Tamiaki H, Shibata R, Mizoguchi T. The 17-propionate function of (bacterio)chlorophylls: biological implication of their long esterifying chains in photosynthetic systems. Photochem Photobiol 2007; 83:152-62. [PMID: 16776548 DOI: 10.1562/2006-02-27-ir-819] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
Abstract
Molecular structures of (bacterio)chlorophylls [= (B)Chls] in photosynthetic apparatus are surveyed, and a diversity of the ester groups of the 17-propionate substituent is particularly focused on in this review. In oxygenic photosynthetic species including green plants and algae, the ester of Chl molecules is limited to a phytyl group. Geranylgeranyl and farnesyl groups in addition to phytyl are observed in (B)Chl molecules inside photosynthetic proteins of anoxygenic bacteria. In main light-harvesting antennas of green bacteria (chlorosomes), a greater variety of ester groups including long straight chains are used in the composite BChl molecules. This diversity is ascribable to the fact that chlorosomal BChls self-aggregate to form a core part of chlorosomes without any specific interaction of oligopeptides. Biological significance of the long chains is discussed in photosynthetic apparatus, especially in chlorosomes.
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Affiliation(s)
- Hitoshi Tamiaki
- Department of Bioscience and Biotechnology, Ritsumeikan University, Kusatsu, Japan.
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