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Szalisznyó K, Silverstein DN. Computational insights on asymmetrical D1 and D2 receptor-mediated chunking: implications for OCD and Schizophrenia. Cogn Neurodyn 2024; 18:217-232. [PMID: 38406202 PMCID: PMC10881457 DOI: 10.1007/s11571-022-09865-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2021] [Revised: 07/06/2022] [Accepted: 07/21/2022] [Indexed: 01/15/2023] Open
Abstract
Repetitive thoughts and motor programs including perseveration are bridge symptoms characteristic of obsessive compulsive disorder (OCD), schizophrenia and in the co-morbid overlap of these conditions. The above pathologies are sensitive to altered activation and kinetics of dopamine D 1 and D 2 receptors that differently influence sequence learning and recall. Recognizing start and stop elements of motor and cognitive behaviors has crucial importance. During chunking, frequent components of temporal strings are concatenated into single units. We extended a published computational model (Asabuki et al. 2018), where two populations of neurons are connected and simulated in a reservoir computing framework. These neural pools were adopted to represent D1 and D2 striatal neuronal populations. We investigated how specific neural and striatal circuit parameters can influence start/stop signaling and found that asymmetric intra-network connection probabilities, synaptic weights and differential time constants may contribute to signaling of start/stop elements within learned sequences. Asymmetric coupling between the striatal D 1 and D 2 neural populations was also demonstrated to be beneficial. Our modeling results predict that dynamical differences between the two dopaminergic striatal populations and the interaction between them may play complementary roles in chunk boundary signaling. Start and stop dichotomies can arise from the larger circuit dynamics as well, since neural and intra-striatal connections only partially support a clear division of labor.
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Affiliation(s)
- Krisztina Szalisznyó
- Department of Medical Sciences, Psychiatry, Uppsala University Hospital, Uppsala University, 751 85 Uppsala, Sweden
- Theoretical Neuroscience and Complex Systems Research Group, Wigner Research Centre for Physics, Budapest, Hungary
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2
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Favila N, Gurney K, Overton PG. Role of the basal ganglia in innate and learned behavioural sequences. Rev Neurosci 2024; 35:35-55. [PMID: 37437141 DOI: 10.1515/revneuro-2023-0038] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2023] [Accepted: 06/24/2023] [Indexed: 07/14/2023]
Abstract
Integrating individual actions into coherent, organised behavioural units, a process called chunking, is a fundamental, evolutionarily conserved process that renders actions automatic. In vertebrates, evidence points to the basal ganglia - a complex network believed to be involved in action selection - as a key component of action sequence encoding, although the underlying mechanisms are only just beginning to be understood. Central pattern generators control many innate automatic behavioural sequences that form some of the most basic behaviours in an animal's repertoire, and in vertebrates, brainstem and spinal pattern generators are under the control of higher order structures such as the basal ganglia. Evidence suggests that the basal ganglia play a crucial role in the concatenation of simpler behaviours into more complex chunks, in the context of innate behavioural sequences such as chain grooming in rats, as well as sequences in which innate capabilities and learning interact such as birdsong, and sequences that are learned from scratch, such as lever press sequences in operant behaviour. It has been proposed that the role of the striatum, the largest input structure of the basal ganglia, might lie in selecting and allowing the relevant central pattern generators to gain access to the motor system in the correct order, while inhibiting other behaviours. As behaviours become more complex and flexible, the pattern generators seem to become more dependent on descending signals. Indeed, during learning, the striatum itself may adopt the functional characteristics of a higher order pattern generator, facilitated at the microcircuit level by striatal neuropeptides.
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Affiliation(s)
- Natalia Favila
- German Center for Neurodegenerative Diseases, 53127 Bonn, Germany
| | - Kevin Gurney
- Department of Psychology, The University of Sheffield, Sheffield S1 2LT, UK
| | - Paul G Overton
- Department of Psychology, The University of Sheffield, Sheffield S1 2LT, UK
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Blankenship TL, Kibbe MM. "Plan chunking" expands 3-year-olds' ability to complete multiple-step plans. Child Dev 2023; 94:1330-1339. [PMID: 37092570 DOI: 10.1111/cdev.13929] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2022] [Revised: 02/15/2023] [Accepted: 02/17/2023] [Indexed: 04/25/2023]
Abstract
The ability to use knowledge to guide the completion of goals is a critical cognitive skill, but 3-year-olds struggle to complete goals that require multiple steps. This study asked whether 3-year-olds could benefit from "plan chunking" to complete multistep goals. Thirty-two U.S. children (range = 35.75-46.59 months; 18 girls; 9 white, 3 mixed race, 20 unknown; tested between July 2020 and April 2021) were asked to complete "treasure maps," retrieving four colored map pieces by pressing specific buttons on a "rainbow box." Children completed more of the four-step sequence correctly when the steps were presented in a way that encouraged chunking the steps into pairs. These findings suggest a potential mechanism supporting memory-guided planning abilities in early childhood.
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Affiliation(s)
| | - Melissa M Kibbe
- Department of Psychological & Brain Sciences, Boston University, Boston, Massachusetts, USA
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Popp NJ, Hernandez-Castillo CR, Gribble PL, Diedrichsen J. The role of feedback in the production of skilled finger sequences. J Neurophysiol 2022; 127:829-839. [PMID: 35235441 PMCID: PMC8957329 DOI: 10.1152/jn.00319.2021] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2021] [Revised: 02/28/2022] [Accepted: 03/01/2022] [Indexed: 11/22/2022] Open
Abstract
Actions involving fine control of the hand, for example, grasping an object, rely heavily on sensory information from the fingertips. Although the integration of feedback during the execution of individual movements is well understood, less is known about the use of sensory feedback in the control of skilled movement sequences. To address this gap, we trained participants to produce sequences of finger movements on a keyboard-like device over a 4-day training period. Participants received haptic, visual, and auditory feedback indicating the occurrence of each finger press. We then either transiently delayed or advanced the feedback for a single press by a small amount of time (30 or 60 ms). We observed that participants rapidly adjusted their ongoing finger press by either accelerating or prolonging the ongoing press, in accordance with the direction of the perturbation. Furthermore, we could show that this rapid behavioral modulation was driven by haptic feedback. Although these feedback-driven adjustments reduced in size with practice, they were still clearly present at the end of training. In contrast to the directionally specific effect we observed on the perturbed press, a feedback perturbation resulted in a delayed onset of the subsequent presses irrespective of perturbation direction or feedback modality. This observation is consistent with a hierarchical organization of even very skilled and fast movement sequences, with different levels reacting distinctly to sensory perturbations.NEW & NOTEWORTHY Sensory feedback is important during the execution of a movement. However, little is known about how sensory feedback is used during the production of movement sequences. Here, we show two distinct feedback processes in the execution of fast finger movement sequences. By transiently delaying or advancing the feedback of a single press within a sequence, we observed a directionally specific effect on the perturbed press and a directionally non-specific effect on the subsequent presses.
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Affiliation(s)
- Nicola J Popp
- The Brain and Mind Institute, University of Western Ontario, London, Ontario, Canada
| | | | - Paul L Gribble
- The Brain and Mind Institute, University of Western Ontario, London, Ontario, Canada
- Department of Psychology, University of Western Ontario, London, Ontario, Canada
- Department of Physiology & Pharmacology, University of Western Ontario, London, Ontario, Canada
- Haskins Laboratories, New Haven, Connecticut
| | - Jörn Diedrichsen
- The Brain and Mind Institute, University of Western Ontario, London, Ontario, Canada
- Department of Statistical and Actuarial Sciences, University of Western Ontario, London, Ontario, Canada
- Department of Computer Science, University of Western Ontario, London, Ontario, Canada
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Alev K, Kütt A, Viigimaa M. Disclosing Pharmacogenetic Feedback of Caffeine via eHealth Channels, Assessment of the Methods and Effects to Behavior Change: A Pilot Study. Front Digit Health 2021; 2:567656. [PMID: 34713041 PMCID: PMC8521856 DOI: 10.3389/fdgth.2020.567656] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2020] [Accepted: 10/15/2020] [Indexed: 11/13/2022] Open
Abstract
Background: The integration of genetic testing into eHealth applications holds great promise for the personalization of disease prevention guidelines. However, relatively little is known about the impact of eHealth applications on an individual's behavior. Aim: The aim of the pilot study was to investigate the effect of the personalized eHealth application approach to behavior change in a 1-month follow-up period on groups with previously known and unknown caffeine impacts. Method: We created a direct-to-consumer approach that includes providing relevant information and personalized reminders and goals on the digital device regarding the caffeine intake for two groups of individuals: the intervention group (IG) with the genetic raw data available and the control group (CG) to test the impact of the same content (article about caffeine metabolism) on participants without the genetic test. Study participants were all Estonians (n = 160). Results: The study suggests that eHealth applications work for short-term behavior change. Participants in the genetic IG tended to increase caffeine intake if they were informed about caffeine not being harmful. They reported feeling better physically and/or mentally after their behavioral change decision during the period of the study. Conclusions: Our pilot study revealed that eHealth applications may have a positive effect for short-term behavior change, regardless of a prior genetic test. Further studies among larger study groups are required to achieve a better understanding about behavior change of individuals in the field of personalized medicine and eHealth interventions.
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Affiliation(s)
- Kerti Alev
- Digital Health, Tallinn University of Technology (TalTech), Tallinn, Estonia
| | - Andres Kütt
- Information Technology and Communication Technologies, Information Technology Department, Tallinn University of Technology (TalTech), Tallinn, Estonia
| | - Margus Viigimaa
- North Estonia Medical Center, Tallinn University of Technology, Tallinn, Estonia
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Ioannucci S, Boutin A, Michelet T, Zenon A, Badets A. Conscious awareness of motor fluidity improves performance and decreases cognitive effort in sequence learning. Conscious Cogn 2021; 95:103220. [PMID: 34655968 DOI: 10.1016/j.concog.2021.103220] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2021] [Revised: 09/14/2021] [Accepted: 10/06/2021] [Indexed: 10/20/2022]
Abstract
Motor skill learning is improved when participants are instructed to judge after each trial whether their performed movements have reached maximal fluidity. Consequently, the conscious awareness of this maximal fluidity can be classified as a genuine learning factor for motor sequences. However, it is unknown whether this effect of conscious awareness on motor learning could be mediated by the increased cognitive effort that may accompany such judgment making. The main aim of this study was to test this hypothesis in comparing two groups with, and without, the conscious awareness of the maximal fluidity. To assess the possible involvement of cognitive effort, we have recorded the pupillary dilation to the task, which is well-known to increase in proportion to cognitive effort. Results confirmed that conscious awareness indeed improved motor sequence learning of the trained sequence specifically. Pupil dilation was smaller during trained than during novel sequence performance, indicating that sequence learning decreased the cognitive cost of sequence execution. However, we found that in the group that had to judge on their maximal fluidity, pupil dilation during sequence production was smaller than in the control group, indicating that the motor improvement induced by the fluidity judgment does not involve additional cognitive effort. We discuss these results in the context of motor learning and cognitive effort theories.
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Affiliation(s)
- Stefano Ioannucci
- CNRS, Institut de Neurosciences Cognitives et Intégratives d'Aquitaine (UMR 5287), Université de Bordeaux, France
| | - Arnaud Boutin
- Université Paris-Saclay, CIAMS, 91405, Orsay, France; Université d'Orléans, CIAMS, 45067, Orléans, France
| | - Thomas Michelet
- CNRS, Institut de Neurosciences Cognitives et Intégratives d'Aquitaine (UMR 5287), Université de Bordeaux, France
| | - Alexandre Zenon
- CNRS, Institut de Neurosciences Cognitives et Intégratives d'Aquitaine (UMR 5287), Université de Bordeaux, France
| | - Arnaud Badets
- CNRS, Institut de Neurosciences Cognitives et Intégratives d'Aquitaine (UMR 5287), Université de Bordeaux, France.
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Development and Alpha Testing of EzHifz Application: Al-Quran Memorization Tool. ADVANCES IN HUMAN-COMPUTER INTERACTION 2021. [DOI: 10.1155/2021/5567001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
Abstract
Learning to memorize the Quran presents a challenge. This paper reports the development and alpha testing of a mobile application called “EzHifz” for Quran memorization based on the VARK learning style. The application received positive feedback for user acceptance testing and heuristic testing. The Fleiss kappa coefficient (κ) results for user acceptance testing show a very good level of agreement (κ = 0.850). Heuristic testing results show that κ = 0.731 for content, manual guide, memorization activities, performance information, and tasmik assessment attributes, while κ = 0.727 for presentation design, interactivity, multimedia elements, attraction, and motivation attributes. These results show a good level of agreement, which indicates that the EzHifz application meets the requirements of design and development based on the attributes evaluated. A combination of memorizing techniques in the application helps strengthen the use of preferred VARK learning styles. The techniques support the use of multiple senses that could facilitate the process of memorizing the Quran independently. This study contributes to the novel design and evaluation of the Quran memorization application based on the Quran memorization model. The application supports the teaching and learning of Quran memorization where it allows students to select their preferred VARK learning style with the technique of memorizing the Quran. This mobile application learning approach based on VARK’s learning style has the potential to be implemented in the process of memorizing the Quran as well as retaining memory through the use of memory senses in support of the learning materials developed.
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Manoochehri M. Up to the magical number seven: An evolutionary perspective on the capacity of short term memory. Heliyon 2021; 7:e06955. [PMID: 34013087 PMCID: PMC8113705 DOI: 10.1016/j.heliyon.2021.e06955] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2020] [Revised: 03/23/2021] [Accepted: 04/26/2021] [Indexed: 11/24/2022] Open
Abstract
Working memory and its components are among the most determinant factors in human cognition. However, in spite of their critical importance, many aspects of their evolution remain underinvestigated. The present study is devoted to reviewing the literature of memory studies from an evolutionary, comparative perspective, focusing particularly on short term memory capacity. The findings suggest the limited capacity to be the common attribute of different species of birds and mammals. Moreover, the results imply an increasing trend of capacity from our non-human ancestors to modern humans. The present evidence shows that non-human mammals and birds, regardless of their limitations, are capable of performing memory strategies, although there seem to be some differences between their ability and that of humans in terms of flexibility and efficiency. These findings have several implications relevant to the psychology of memory and cognition, and are likely to explain differences between higher cognitive abilities of humans and non-humans. The adaptive benefits of the limited capacity and the reasons for the growing trend found in the present study are broadly discussed.
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VanEtten L, Briggs M, DeWitt J, Mansfield C, Kaeding C. The Implementation of Therapeutic Alliance in the Rehabilitation of an Elite Pediatric Athlete with Salter-Harris Fracture: A Case Report. Int J Sports Phys Ther 2021; 16:539-551. [PMID: 33842050 PMCID: PMC8016442 DOI: 10.26603/001c.19448] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2019] [Accepted: 10/10/2020] [Indexed: 11/23/2022] Open
Abstract
BACKGROUND/PURPOSE Although research on the value of therapeutic alliance is prominent in other areas of health care, physical therapy research is limited. The purpose is to describe the incorporation of therapeutic alliance concepts throughout the rehabilitation of an elite pediatric athlete with a complicated recovery following a fracture to the distal femoral epiphysis. CASE DESCRIPTION A 14-year-old male was referred to physical therapy following an open reduction and internal fixation to address a type IV Salter-Harris fracture of the right distal femoral epiphysis. Post-operative care included immobilization in a brace for six weeks and he initiated physical therapy for four weeks (post-op weeks 6-10). At 10-weeks post-injury his range of motion and strength were severely limited compared to expected post-operative milestones. Due to these deficits an arthroscopic debridement of the subject's right knee, hardware removal, and manipulation under anesthesia was performed. The subject then reported to the physical therapist on post-operative day three for evaluation and treatment without bracing or weight-bearing restrictions. OUTCOMES The episode of care spanned 17 weeks and included 25 physical therapy sessions. To facilitate therapeutic alliance with the subject, clear communication and easily measurable goals were established and connected to the subject's relevant needs as an athlete. The plan of care was divided into three phases using "chunking" techniques to establish the rehabilitation priorities. The subject demonstrated improved range of motion, strength and was able to return to hydroplane racing and won a national championship in his age group. DISCUSSION The unique aspect of this case was the incorporation of therapeutic alliance concepts and techniques into the rehabilitative management of a subject with a complicated fracture to the distal femoral epiphysis. The physical therapist built trust with the subject and facilitated a successful return to elite hydroplane boat racing. LEVEL OF EVIDENCE 4. STUDY DESIGN Case Report.
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Affiliation(s)
- Lucas VanEtten
- OSU Sports Medicine, The Ohio State University Wexner Medical Center, Columbus, OH, USA
| | - Matthew Briggs
- OSU Sports Medicine, The Ohio State University Wexner Medical Center, Columbus, OH, USA; Sports Medicine Research Institute, The Ohio State University Wexner Medical Center, Columbus, OH, USA; Department of Orthopaedics, The Ohio State University Wexner Medical Center, Columbus, OH, USA; School of Health and Rehabilitation Sciences, College of Medicine, The Ohio State University, Columbus, OH, USA
| | - John DeWitt
- OSU Sports Medicine, The Ohio State University Wexner Medical Center, Columbus, OH, USA
| | - Cody Mansfield
- OSU Sports Medicine, The Ohio State University Wexner Medical Center, Columbus, OH, USA; School of Health and Rehabilitation Sciences, College of Medicine, The Ohio State University, Columbus, OH, USA
| | - Christopher Kaeding
- OSU Sports Medicine, The Ohio State University Wexner Medical Center, Columbus, OH, USA; Sports Medicine Research Institute, The Ohio State University Wexner Medical Center, Columbus, OH, USA; Department of Orthopaedics, The Ohio State University Wexner Medical Center, Columbus, OH, USA
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Popp NJ, Yokoi A, Gribble PL, Diedrichsen J. The effect of instruction on motor skill learning. J Neurophysiol 2020; 124:1449-1457. [PMID: 32997556 DOI: 10.1152/jn.00271.2020] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
Many motor skills are learned with the help of instructions. In the context of complex motor sequences, instructions often break down the movement into chunks that can then be practiced in isolation. Thus, instructions shape an initial cognitive representation of the skill, which in turn guides practice. Are there ways of breaking up a motor sequence that are better than others? If participants are instructed in a way that hinders performance, how much practice does it take to overcome the influence of the instruction? To answer these questions, we used a paradigm in which participants were asked to perform finger sequences as fast and accurately as possible on a keyboard-like device. In the initial phases of training, participants had to explicitly remember and practice two- or three-digit chunks. These chunks were then combined to form seven 11-digit sequences that participants practiced for the remainder of the study. Each sequence was broken up into chunks in a way such that the instruction was either aligned or misaligned with the basic execution-level constraints. We found that misaligned chunk instruction led to an initial performance deficit compared with the aligned chunk instruction. Overall, instructions still influenced the temporal pattern of performance after 10 days of subsequent training, with shorter interpress intervals within a chunk compared with between chunks. However, for the misaligned instructed sequences, this temporal pattern was altered more rapidly, such that participants could overcome the induced performance deficit in the last week. At the end of training, participants found idiosyncratic, but interindividually stable, ways of performing each sequence.NEW & NOTEWORTHY Instructions often break down motor sequences into smaller parts, such that they can be more easily remembered. Here, we show that different ways of breaking down a finger sequence can subsequently lead to better or worse performance. The initial instruction still influenced the temporal performance pattern after 10 days of practice. The results demonstrate that the initial cognitive representation of a motor skill strongly influences how a skill is learned and performed.
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Affiliation(s)
- Nicola J Popp
- The Brain and Mind Institute, University of Western Ontario, London, Ontario, Canada
| | - Atsushi Yokoi
- Graduate School of Frontier Biosciences, Osaka University, Osaka, Japan.,Center for Information and Neural Networks (CiNet), NICT, Osaka, Japan
| | - Paul L Gribble
- The Brain and Mind Institute, University of Western Ontario, London, Ontario, Canada.,Department of Psychology, University of Western Ontario, London, Ontario, Canada.,Department of Physiology & Pharmacology, Schulich School of Medicine & Dentistry, University of Western Ontario, London, Ontario, Canada.,Haskins Laboratories, New Haven, Connecticut
| | - Jörn Diedrichsen
- The Brain and Mind Institute, University of Western Ontario, London, Ontario, Canada.,Department of Statistical and Actuarial Sciences, University of Western Ontario, London, Ontario, Canada.,Department of Computer Science, University of Western Ontario, London, Ontario, Canada
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Beukema P, Verstynen T. Predicting and binding: interacting algorithms supporting the consolidation of sequential motor skills. Curr Opin Behav Sci 2018. [DOI: 10.1016/j.cobeha.2017.11.014] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
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12
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Manohar SG, Pertzov Y, Husain M. Short-term memory for spatial, sequential and duration information. Curr Opin Behav Sci 2017; 17:20-26. [PMID: 29167809 PMCID: PMC5678495 DOI: 10.1016/j.cobeha.2017.05.023] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
Analog report methods provide novel insights on STM for space and time. Space and time may be used to bind features in STM. The hippocampus is involved in object-location binding in STM.
Space and time appear to play key roles in the way that information is organized in short-term memory (STM). Some argue that they are crucial contexts within which other stored features are embedded, allowing binding of information that belongs together within STM. Here we review recent behavioral, neurophysiological and imaging studies that have sought to investigate the nature of spatial, sequential and duration representations in STM, and how these might break down in disease. Findings from these studies point to an important role of the hippocampus and other medial temporal lobe structures in aspects of STM, challenging conventional accounts of involvement of these regions in only long-term memory.
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Affiliation(s)
- Sanjay G Manohar
- Dept Experimental Psychology and Nuffield Dept of Clinical Neuroscience, University of Oxford, United Kingdom
| | - Yoni Pertzov
- Dept of Psychology, The Hebrew University of Jerusalem, Israel
| | - Masud Husain
- Dept Experimental Psychology and Nuffield Dept of Clinical Neuroscience, University of Oxford, United Kingdom
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Alamia A, Solopchuk O, Olivier E, Zenon A. Non-parametric Algorithm to Isolate Chunks in Response Sequences. Front Behav Neurosci 2016; 10:177. [PMID: 27708565 PMCID: PMC5030762 DOI: 10.3389/fnbeh.2016.00177] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2016] [Accepted: 09/02/2016] [Indexed: 12/02/2022] Open
Abstract
Chunking consists in grouping items of a sequence into small clusters, named chunks, with the assumed goal of lessening working memory load. Despite extensive research, the current methods used to detect chunks, and to identify different chunking strategies, remain discordant and difficult to implement. Here, we propose a simple and reliable method to identify chunks in a sequence and to determine their stability across blocks. This algorithm is based on a ranking method and its major novelty is that it provides concomitantly both the features of individual chunk in a given sequence, and an overall index that quantifies the chunking pattern consistency across sequences. The analysis of simulated data confirmed the validity of our method in different conditions of noise, chunk lengths and chunk numbers; moreover, we found that this algorithm was particularly efficient in the noise range observed in real data, provided that at least 4 sequence repetitions were included in each experimental block. Furthermore, we applied this algorithm to actual reaction time series gathered from 3 published experiments and were able to confirm the findings obtained in the original reports. In conclusion, this novel algorithm is easy to implement, is robust to outliers and provides concurrent and reliable estimation of chunk position and chunking dynamics, making it useful to study both sequence-specific and general chunking effects. The algorithm is available at: https://github.com/artipago/Non-parametric-algorithm-to-isolate-chunks-in-response-sequences.
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Affiliation(s)
- Andrea Alamia
- Institute of Neuroscience, Université catholique de Louvain Bruxelles, Belgique
| | - Oleg Solopchuk
- Institute of Neuroscience, Université catholique de Louvain Bruxelles, Belgique
| | - Etienne Olivier
- Institute of Neuroscience, Université catholique de Louvain Bruxelles, Belgique
| | - Alexandre Zenon
- Institute of Neuroscience, Université catholique de Louvain Bruxelles, Belgique
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