1
|
High frequency conductivity decomposition by solving physically constraint underdetermined inverse problem in human brain. Sci Rep 2023; 13:3273. [PMID: 36841894 PMCID: PMC9968322 DOI: 10.1038/s41598-023-30344-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2022] [Accepted: 02/21/2023] [Indexed: 02/27/2023] Open
Abstract
The developed magnetic resonance electrical properties tomography (MREPT) can visualize the internal conductivity distribution at Larmor frequency by measuring the B1 transceive phase data from magnetic resonance imaging (MRI). The recovered high-frequency conductivity (HFC) value is highly complex and heterogeneous in a macroscopic imaging voxel. Using high and low b-value diffusion weighted imaging (DWI) data, the multi-compartment spherical mean technique (MC-SMT) characterizes the water molecule movement within and between intra- and extra-neurite compartments by analyzing the microstructures and underlying architectural organization of brain tissues. The proposed method decomposes the recovered HFC into the conductivity values in the intra- and extra-neurite compartments via the recovered intra-neurite volume fraction (IVF) and the diffusion patterns using DWI data. As a form of decomposition of intra- and extra-neurite compartments, the problem to determine the intra- and extra-neurite conductivity values from the HFC is still an underdetermined inverse problem. To solve the underdetermined problem, we use the compartmentalized IVF as a criterion to decompose the electrical properties because the ion-concentration and mobility have different characteristics in the intra- and extra-neurite compartments. The proposed method determines a representative apparent intra- and extra-neurite conductivity values by changing the underdetermined equation for a voxel into an over-determined minimization problem over a local window consisting of surrounding voxels. To suppress the noise amplification and estimate a feasible conductivity, we define a diffusion pattern distance to weight the over-determined system in the local window. To quantify the proposed method, we conducted a simulation experiment. The simulation experiments show the relationships between the noise reduction and the spatial resolution depending on the designed local window sizes and diffusion pattern distance. Human brain experiments (five young healthy volunteers and a patient with brain tumor) were conducted to evaluate and validate the reliability of the proposed method. To quantitatively compare the results with previously developed methods, we analyzed the errors for reconstructed extra-neurite conductivity using existing methods and indirectly verified the feasibility of the proposed method.
Collapse
|
2
|
Perakis E. On Modelling Electrical Conductivity of the Cerebral White Matter. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2023; 1424:81-89. [PMID: 37486482 DOI: 10.1007/978-3-031-31982-2_9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/25/2023]
Abstract
The conductivity, in general, of the brain tissues is a characteristic key of functional cerebral changes. White matter electric conductivity appears to be extremely anisotropic, so a tensor (matrix) is needed to describe it. Traditional methods of imaging brain electrical properties fail to capture it and required the interpolation of the diffusion matrix. The electrochemical model is suitable for analysis, while, on the other hand, the volume fraction model is suitable for studying the effect of white matter structural changes in relation to electrical conductivity. It adopts a relevant algorithm, based upon a linear conductivity-to-diffusivity relationship and a volume constraint, respectively. It incorporates the effects of the partial volume of the cerebrospinal fluid and the structure of the neuronal fiber crossing, which was not achieved by the existing algorithms, accomplishing a more accurate estimation of the anisotropic conductivity of the white matter. Diffusion matrix imaging is a powerful noninvasive method for characterizing neuronal tissue in the human brain. The ultimate goal is to study and draw appropriate conclusions, regarding the molecule diffusion in the brain under normal physiological conditions and the changes that occur in development, diseases, and aging. The ability to measure the electrical conductivity of brain tissues in a noninvasive way also helps in characterizing endogenous currents by measuring the associated electromagnetic fields.
Collapse
|
3
|
Liu W, Cao Y, Zhou X, Han D. Interstitial Fluid Behavior and Diseases. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2022; 9:e2100617. [PMID: 34978164 PMCID: PMC8867152 DOI: 10.1002/advs.202100617] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/14/2021] [Revised: 10/18/2021] [Indexed: 06/14/2023]
Abstract
Living things comprise a typical hierarchical and porous medium, and their most fundamental logical architectures are interstitial structures encapsulating parenchymal structures. The recent discovery of the efficient transport mechanisms of interstitial streams has provided a new understanding of these complex activities. The substance transport of interstitial streams follows mesoscopic fluid behavior dynamics, which is intimately associated with material transfer in nanoconfined spaces and a unique signal transmission. Accordingly, the evaluation of interstitial stream transport behavior at the mesoscopic scale is essential. In this review, recent advances in physical and chemical properties, the substance transport model, and the characterization methods of interstitial streams at the mesoscopic scale, as well as the relationships between interstitial streams and disease are summarized. Interstitial stream transport can be used as a basis to fully mine hierarchal behavior in images to expand imaging behavior into an omics field. By starting from the perspective of soft matter, a new understanding can be gained of health and disease and quantitative physical markers for research, clinical diagnosis, and treatment can be provided, as well as prognosis evaluation in complex diseases such as cancer and Alzheimer's disease. This will provide a foundation for the development of medicine of soft matter.
Collapse
Affiliation(s)
- Wen‐Tao Liu
- CAS Center for Excellence in NanoscienceNational Center for Nanoscience and TechnologyBeijing100190P. R. China
| | - Yu‐Peng Cao
- CAS Center for Excellence in NanoscienceNational Center for Nanoscience and TechnologyBeijing100190P. R. China
- School of Future TechnologyUniversity of Chinese Academy of SciencesBeijing100049P. R. China
| | - Xiao‐Han Zhou
- CAS Center for Excellence in NanoscienceNational Center for Nanoscience and TechnologyBeijing100190P. R. China
- School of Future TechnologyUniversity of Chinese Academy of SciencesBeijing100049P. R. China
| | - Dong Han
- CAS Center for Excellence in NanoscienceNational Center for Nanoscience and TechnologyBeijing100190P. R. China
- School of Future TechnologyUniversity of Chinese Academy of SciencesBeijing100049P. R. China
| |
Collapse
|
4
|
Torquato S. Diffusion spreadability as a probe of the microstructure of complex media across length scales. Phys Rev E 2021; 104:054102. [PMID: 34942710 DOI: 10.1103/physreve.104.054102] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2021] [Accepted: 10/15/2021] [Indexed: 11/07/2022]
Abstract
Understanding time-dependent diffusion processes in multiphase media is of great importance in physics, chemistry, materials science, petroleum engineering, and biology. Consider the time-dependent problem of mass transfer of a solute between two phases and assume that the solute is initially distributed in one phase (phase 2) and absent from the other (phase 1). We desire the fraction of total solute present in phase 1 as a function of time, S(t), which we call the spreadability, since it is a measure of the spreadability of diffusion information as a function of time. We derive exact direct-space formulas for S(t) in any Euclidean space dimension d in terms of the autocovariance function as well as corresponding Fourier representations of S(t) in terms of the spectral density, which are especially useful when scattering information is available experimentally or theoretically. These are singular results because they are rare examples of mass transport problems where exact solutions are possible. We derive closed-form general formulas for the short- and long-time behaviors of the spreadability in terms of crucial small- and large-scale microstructural information, respectively. The long-time behavior of S(t) enables one to distinguish the entire spectrum of microstructures that span from hyperuniform to nonhyperuniform media. For hyperuniform media, disordered or not, we show that the "excess" spreadability, S(∞)-S(t), decays to its long-time behavior exponentially faster than that of any nonhyperuniform two-phase medium, the "slowest" being antihyperuniform media. The stealthy hyperuniform class is characterized by an excess spreadability with the fastest decay rate among all translationally invariant microstructures. We obtain exact results for S(t) for a variety of specific ordered and disordered model microstructures across dimensions that span from hyperuniform to antihyperuniform media. Moreover, we establish a remarkable connection between the spreadability and an outstanding problem in discrete geometry, namely, microstructures with "fast" spreadabilities are also those that can be derived from efficient "coverings" of space. We also identify heretofore unnoticed, to our best knowledge, remarkable links between the spreadability S(t) and NMR pulsed field gradient spin-echo amplitude as well as diffusion MRI measurements. This investigation reveals that the time-dependent spreadability is a powerful, dynamic-based figure of merit to probe and classify the spectrum of possible microstructures of two-phase media across length scales.
Collapse
Affiliation(s)
- Salvatore Torquato
- Department of Chemistry, Department of Physics, Princeton Institute for the Science and Technology of Materials, and Program in Applied and Computational Mathematics, Princeton University, Princeton, New Jersey 08544, USA
| |
Collapse
|
5
|
Katoch N, Choi BK, Park JA, Ko IO, Kim HJ. Comparison of Five Conductivity Tensor Models and Image Reconstruction Methods Using MRI. Molecules 2021; 26:5499. [PMID: 34576970 PMCID: PMC8467711 DOI: 10.3390/molecules26185499] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2021] [Revised: 08/30/2021] [Accepted: 09/07/2021] [Indexed: 11/16/2022] Open
Abstract
Imaging of the electrical conductivity distribution inside the human body has been investigated for numerous clinical applications. The conductivity tensors of biological tissue have been obtained from water diffusion tensors by applying several models, which may not cover the entire phenomenon. Recently, a new conductivity tensor imaging (CTI) method was developed through a combination of B1 mapping, and multi-b diffusion weighted imaging. In this study, we compared the most recent CTI method with the four existing models of conductivity tensors reconstruction. Two conductivity phantoms were designed to evaluate the accuracy of the models. Applied to five human brains, the conductivity tensors using the four existing models and CTI were imaged and compared with the values from the literature. The conductivity image of the phantoms by the CTI method showed relative errors between 1.10% and 5.26%. The images by the four models using DTI could not measure the effects of different ion concentrations subsequently due to prior information of the mean conductivity values. The conductivity tensor images obtained from five human brains through the CTI method were comparable to previously reported literature values. The images by the four methods using DTI were highly correlated with the diffusion tensor images, showing a coefficient of determination (R2) value of 0.65 to 1.00. However, the images by the CTI method were less correlated with the diffusion tensor images and exhibited an averaged R2 value of 0.51. The CTI method could handle the effects of different ion concentrations as well as mobilities and extracellular volume fractions by collecting and processing additional B1 map data. It is necessary to select an application-specific model taking into account the pros and cons of each model. Future studies are essential to confirm the usefulness of these conductivity tensor imaging methods in clinical applications, such as tumor characterization, EEG source imaging, and treatment planning for electrical stimulation.
Collapse
Affiliation(s)
- Nitish Katoch
- Department of Biomedical Engineering, Kyung Hee University, Seoul 02447, Korea; (N.K.); (B.-K.C.)
| | - Bup-Kyung Choi
- Department of Biomedical Engineering, Kyung Hee University, Seoul 02447, Korea; (N.K.); (B.-K.C.)
| | - Ji-Ae Park
- Division of Applied RI, Korea Institute of Radiological and Medical Science, Seoul 01812, Korea;
| | - In-Ok Ko
- Division of Applied RI, Korea Institute of Radiological and Medical Science, Seoul 01812, Korea;
| | - Hyung-Joong Kim
- Department of Biomedical Engineering, Kyung Hee University, Seoul 02447, Korea; (N.K.); (B.-K.C.)
| |
Collapse
|
6
|
Abstract
Transport properties of porous media are intimately linked to their pore-space microstructures. We quantify geometrical and topological descriptors of the pore space of certain disordered and ordered distributions of spheres, including pore-size functions and the critical pore radius δ_{c}. We focus on models of porous media derived from maximally random jammed sphere packings, overlapping spheres, equilibrium hard spheres, quantizer sphere packings, and crystalline sphere packings. For precise estimates of the percolation thresholds, we use a strict relation of the void percolation around sphere configurations to weighted bond percolation on the corresponding Voronoi networks. We use the Newman-Ziff algorithm to determine the percolation threshold using universal properties of the cluster size distribution. The critical pore radius δ_{c} is often used as the key characteristic length scale that determines the fluid permeability k. A recent study [Torquato, Adv. Wat. Resour. 140, 103565 (2020)10.1016/j.advwatres.2020.103565] suggested for porous media with a well-connected pore space an alternative estimate of k based on the second moment of the pore size 〈δ^{2}〉, which is easier to determine than δ_{c}. Here, we compare δ_{c} to the second moment of the pore size 〈δ^{2}〉, and indeed confirm that, for all porosities and all models considered, δ_{c}^{2} is to a good approximation proportional to 〈δ^{2}〉. However, unlike 〈δ^{2}〉, the permeability estimate based on δ_{c}^{2} does not predict the correct ranking of k for our models. Thus, we confirm 〈δ^{2}〉 to be a promising candidate for convenient and reliable estimates of the fluid permeability for porous media with a well-connected pore space. Moreover, we compare the fluid permeability of our models with varying degrees of order, as measured by the τ order metric. We find that (effectively) hyperuniform models tend to have lower values of k than their nonhyperuniform counterparts. Our findings could facilitate the design of porous media with desirable transport properties via targeted pore statistics.
Collapse
|
7
|
Marino M, Cordero-Grande L, Mantini D, Ferrazzi G. Conductivity Tensor Imaging of the Human Brain Using Water Mapping Techniques. Front Neurosci 2021; 15:694645. [PMID: 34393709 PMCID: PMC8363203 DOI: 10.3389/fnins.2021.694645] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2021] [Accepted: 07/14/2021] [Indexed: 11/13/2022] Open
Abstract
Conductivity tensor imaging (CTI) has been recently proposed to map the conductivity tensor in 3D using magnetic resonance imaging (MRI) at the frequency range of the brain at rest, i.e., low-frequencies. Conventional CTI mapping methods process the trans-receiver phase of the MRI signal using the MR electric properties tomography (MR-EPT) technique, which in turn involves the application of the Laplace operator. This results in CTI maps with a low signal-to-noise ratio (SNR), artifacts at tissue boundaries and a limited spatial resolution. In order to improve on these aspects, a methodology independent from the MR-EPT method is proposed. This relies on the strong assumption for which electrical conductivity is univocally pre-determined by water concentration. In particular, CTI maps are calculated by combining high-frequency conductivity derived from water maps and multi b-value diffusion tensor imaging (DTI) data. Following the implementation of a pipeline to optimize the pre-processing of diffusion data and the fitting routine of a multi-compartment diffusivity model, reconstructed conductivity images were evaluated in terms of the achieved spatial resolution in five healthy subjects scanned at rest. We found that the pre-processing of diffusion data and the optimization of the fitting procedure improve the quality of conductivity maps. We achieve reproducible measurements across healthy participants and, in particular, we report conductivity values across subjects of 0.55 ± 0.01Sm, 0.3 ± 0.01Sm and 2.15 ± 0.02Sm for gray matter (GM), white matter (WM), and cerebrospinal fluid (CSF), respectively. By attaining an actual spatial resolution of the conductivity tensor close to 1 mm in-plane isotropic, partial volume effects are reduced leading to good discrimination of tissues with similar conductivity values, such as GM and WM. The application of the proposed framework may contribute to a better definition of the head tissue compartments in electroencephalograpy/magnetoencephalography (EEG/MEG) source imaging and be used as biomarker for assessing conductivity changes in pathological conditions, such as stroke and brain tumors.
Collapse
Affiliation(s)
- Marco Marino
- Research Center for Motor Control and Neuroplasticity, KU Leuven, Leuven, Belgium.,IRCCS San Camillo Hospital, Venice, Italy
| | - Lucilio Cordero-Grande
- Biomedical Image Technologies, ETSI Telecomunicación, Universidad Politécnica de Madrid and CIBER-BBN, Madrid, Spain
| | - Dante Mantini
- Research Center for Motor Control and Neuroplasticity, KU Leuven, Leuven, Belgium.,IRCCS San Camillo Hospital, Venice, Italy
| | | |
Collapse
|
8
|
Jahng GH, Lee MB, Kim HJ, Je Woo E, Kwon OI. Low-frequency dominant electrical conductivity imaging of in vivo human brain using high-frequency conductivity at Larmor-frequency and spherical mean diffusivity without external injection current. Neuroimage 2020; 225:117466. [PMID: 33075557 DOI: 10.1016/j.neuroimage.2020.117466] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2019] [Revised: 08/24/2020] [Accepted: 10/12/2020] [Indexed: 10/23/2022] Open
Abstract
Diffusion weighted imaging based on random Brownian motion of water molecules within a voxel provides information on the micro-structure of biological tissues through water molecule diffusivity. As the electrical conductivity is primarily determined by the concentration and mobility of ionic charge carriers, the macroscopic electrical conductivity of biological tissues is also related to the diffusion of electrical ions. This paper aims to investigate the low-frequency electrical conductivity by relying on a pre-defined biological model that separates the brain into the intracellular (restricted) and extracellular (hindered) compartments. The proposed method uses B1 mapping technique, which provides a high-frequency conductivity distribution at Larmor frequency, and the spherical mean technique, which directly estimates the microscopic tissue structure based on the water molecule diffusivity and neurite orientation distribution. The total extracellular ion concentration, which is separated from the high-frequency conductivity, is recovered using the estimated diffusivity parameters and volume fraction in each compartment. We propose a method to reconstruct the low-frequency dominant conductivity tensor by taking into consideration the extracted extracellular diffusion tensor map and the reconstructed electrical parameters. To demonstrate the reliability of the proposed method, we conducted two phantom experiments. The first one used a cylindrical acrylic cage filled with an agar in the background region and four anomalies for the effect of ion concentration on the electrical conductivity. The other experiment, in which the effect of ion mobility on the conductivity was verified, used cell-like materials with thin insulating membranes suspended in an electrolyte. Animal and human brain experiments were conducted to visualize the low-frequency dominant conductivity tensor images. The proposed method using a conventional MRI scanner can predict the internal current density map in the brain without directly injected external currents.
Collapse
Affiliation(s)
- Geon-Ho Jahng
- Department of Radiology, Kyung Hee University Hospital at Gangdong, College of Medicine, Kyung Hee University, Dongnam-ro, Gangdong-gu, Seoul 05278, Republic of Korea
| | - Mun Bae Lee
- Department of Mathematics, Konkuk University, Neungdong-ro, Gwangjin-gu, Seoul 05029, Republic of Korea
| | - Hyung Joong Kim
- Department of Biomedical Engineering, Kyung Hee University, Seoul 02447, Republic of Korea
| | - Eung Je Woo
- Department of Biomedical Engineering, Kyung Hee University, Seoul 02447, Republic of Korea
| | - Oh-In Kwon
- Department of Mathematics, Konkuk University, Neungdong-ro, Gwangjin-gu, Seoul 05029, Republic of Korea.
| |
Collapse
|
9
|
Multifunctional composites for elastic and electromagnetic wave propagation. Proc Natl Acad Sci U S A 2020; 117:8764-8774. [PMID: 32273385 DOI: 10.1073/pnas.1914086117] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Composites are ideally suited to achieve desirable multifunctional effective properties since the best properties of different materials can be judiciously combined with designed microstructures. Here, we establish cross-property relations for two-phase composite media that link effective elastic and electromagnetic wave characteristics to one another, including the respective effective wave speeds and attenuation coefficients, which facilitate multifunctional material design. This is achieved by deriving accurate formulas for the effective electromagnetic and elastodynamic properties that depend on the wavelengths of the incident waves and the microstructure via the spectral density. Our formulas enable us to explore the wave characteristics of a broad class of disordered microstructures because they apply, unlike conventional formulas, to a wide range of incident wavelengths (i.e., well beyond the long-wavelength regime). This capability enables us to study the dynamic properties of exotic disordered "hyperuniform" composites that can have advantages over crystalline ones, such as nearly optimal, direction-independent properties and robustness against defects. We specifically show that disordered "stealthy" hyperuniform microstructures exhibit novel wave characteristics (e.g., low-pass filters that transmit waves "isotropically" up to a finite wavenumber). Our cross-property relations for the effective wave characteristics can be applied to design multifunctional composites via inverse techniques. Design examples include structural components that require high stiffness and electromagnetic absorption; heat sinks for central processing units and sound-absorbing housings for motors that have to efficiently emit thermal radiation and suppress mechanical vibrations; and nondestructive evaluation of the elastic moduli of materials from the effective dielectric response.
Collapse
|
10
|
Lee MB, Kim YH, Kim HJ, Kwon OI. Anisotropic conductivity tensor by analyzing diffusion tensor for electrical brain stimulation (EBS). Phys Med Biol 2018; 63:24NT04. [PMID: 30523812 DOI: 10.1088/1361-6560/aaf24a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
Electrical brain stimulation (EBS) is a promising medical treatment method for brain neurological disorders through the direct or indirect excitation by injecting an electric current. At present, it is difficult to directly measure the distribution of the electric current delivered by electrodes inside tissues. By applying low-frequency ([Formula: see text]1 kHz) external electrical brain stimulation (EBS), the low-frequency conductivity around the cells is uneven due to asymmetric cellular structures. We propose a method of electrical property imaging using the measured one component magnetic flux density by EBS and diffusion tensor imaging (DTI). The low-frequency electrical anisotropic conductivity tensor can be decomposed into the ion concentration and the mobility tensor of charge carriers. By analyzing the role of the diffusion tensor, we reconstruct the apparent anisotropic tensor by EBS using the [Formula: see text]-component of measured magnetic flux density data and the estimated diffusion tensor. Using only the measured [Formula: see text]-component of magnetic flux density, the orthotropic conductivity tensor can be approximately recovered. The orthotropic conductivity tensor is not exact, but only reflects the extracellular space (ECS) effects. By comparing the components of orthotropic tensor and diffusion tensor, we stably determine a scale factor which primarily reflects the concentration of total ions in the extracellular space (ECS). Animal experiments verify that the proposed method recovers the anisotropic conductivity tensor which can visualize electrical properties during EBS of the brain. A direct reconstruction method for the apparent anisotropic conductivity tensor imaging during EBS was proposed to analyze unknown effects to brain tissue.
Collapse
Affiliation(s)
- Mun Bae Lee
- Department of Mathematics, Konkuk University, Seoul, 05029, Republic of Korea
| | | | | | | |
Collapse
|
11
|
Mesomechanical Modeling and Numerical Simulation of the Diffraction Elastic Constants for Ti6Al4V Polycrystalline Alloy. METALS 2018. [DOI: 10.3390/met8100822] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
A mesoscopic mechanical model based on the Mori-Tanaka method and Eshelby’s inclusion theory was presented to investigate the uniform elastic deformation behavior of Ti6Al4V with β-Ti and α-Ti phases. In particular, elastic mechanics field equations of inclusion and matrix phases were established separately, and several crystal plane diffraction elastic constants were predicted under uniaxial loading in this model. The results demonstrated that diffracted crystal plane elastic constants diversified with the elastic stiffness of the composition phase. In consequence, elastic deformation of one particular phase is related to the constraint of the whole deformation of all the phases constituting the materials. In this work, diffracted crystal plane elastic constants corresponding to different phases exert a substantial role in the determination of stresses by diffraction methods. Several numerical simulation results were compared and discussed.
Collapse
|
12
|
Torquato S, Chen D. Multifunctional hyperuniform cellular networks: optimality, anisotropy and disorder. ACTA ACUST UNITED AC 2018. [DOI: 10.1088/2399-7532/aaca91] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
|
13
|
A review of anisotropic conductivity models of brain white matter based on diffusion tensor imaging. Med Biol Eng Comput 2018; 56:1325-1332. [DOI: 10.1007/s11517-018-1845-9] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2016] [Accepted: 05/08/2018] [Indexed: 10/14/2022]
|
14
|
Lee MB, Kim HJ, Woo EJ, Kwon OI. Anisotropic conductivity tensor imaging for transcranial direct current stimulation (tDCS) using magnetic resonance diffusion tensor imaging (MR-DTI). PLoS One 2018; 13:e0197063. [PMID: 29763453 PMCID: PMC5953498 DOI: 10.1371/journal.pone.0197063] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2018] [Accepted: 04/25/2018] [Indexed: 11/18/2022] Open
Abstract
Transcranial direct current stimulation (tDCS) is a widely used non-invasive brain stimulation technique by applying low-frequency weak direct current via electrodes attached on the head. The tDCS using a fixed current between 1 and 2 mA has relied on computational modelings to achieve optimal stimulation effects. Recently, by measuring the tDCS current induced magnetic field using an MRI scanner, the internal current pathway has been successfully recovered. However, up to now, there is no technique to visualize electrical properties including the electrical anisotropic conductivity, effective extracellular ion-concentration, and electric field using only the tDCS current in-vivo. By measuring the apparent diffusion coefficient (ADC) and the magnetic flux density induced by the tDCS, we propose a method to visualize the electrical properties. We reconstruct the scale parameter, which connects the anisotropic conductivity tensor to the diffusion tensor of water molecules, by introducing a repetitive scheme called the diffusion tensor J-substitution algorithm using the recovered current density and the measured ADCs. We investigate the proposed method to explain why the iterative scheme converges to the internal conductivity. We verified the proposed method with an anesthetized canine brain to visualize electrical properties including the electrical properties by tDCS current.
Collapse
Affiliation(s)
- Mun Bae Lee
- Department of Mathematics, Konkuk University, Seoul, Korea
| | - Hyung Joong Kim
- Department of Biomedical Engineering, Kyung Hee University, Seoul, Korea
| | - Eung Je Woo
- Department of Biomedical Engineering, Kyung Hee University, Seoul, Korea
| | - Oh In Kwon
- Department of Mathematics, Konkuk University, Seoul, Korea
- * E-mail:
| |
Collapse
|
15
|
Sajib SZK, Lee MB, Kim HJ, Woo EJ, Kwon OI. Extracellular Total Electrolyte Concentration Imaging for Electrical Brain Stimulation (EBS). Sci Rep 2018; 8:290. [PMID: 29321483 PMCID: PMC5762666 DOI: 10.1038/s41598-017-18515-3] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2017] [Accepted: 12/13/2017] [Indexed: 11/09/2022] Open
Abstract
Techniques for electrical brain stimulation (EBS), in which weak electrical stimulation is applied to the brain, have been extensively studied in various therapeutic brain functional applications. The extracellular fluid in the brain is a complex electrolyte that is composed of different types of ions, such as sodium (Na+), potassium (K+), and calcium (Ca+). Abnormal levels of electrolytes can cause a variety of pathological disorders. In this paper, we present a novel technique to visualize the total electrolyte concentration in the extracellular compartment of biological tissues. The electrical conductivity of biological tissues can be expressed as a product of the concentration and the mobility of the ions. Magnetic resonance electrical impedance tomography (MREIT) investigates the electrical properties in a region of interest (ROI) at low frequencies (below 1 kHz) by injecting currents into the brain region. Combining with diffusion tensor MRI (DT-MRI), we analyze the relation between the concentration of ions and the electrical properties extracted from the magnetic flux density measurements using the MREIT technique. By measuring the magnetic flux density induced by EBS, we propose a fast non-iterative technique to visualize the total extracellular electrolyte concentration (EEC), which is a fundamental component of the conductivity. The proposed technique directly recovers the total EEC distribution associated with the water transport mobility tensor.
Collapse
Affiliation(s)
- Saurav Z K Sajib
- Department of Biomedical Engineering, Kyung Hee University, Seoul, 02447, Korea
| | - Mun Bae Lee
- Department of Mathematics, Konkuk University, Seoul, 05029, Korea
| | - Hyung Joong Kim
- Department of Biomedical Engineering, Kyung Hee University, Seoul, 02447, Korea
| | - Eung Je Woo
- Department of Biomedical Engineering, Kyung Hee University, Seoul, 02447, Korea
| | - Oh In Kwon
- Department of Mathematics, Konkuk University, Seoul, 05029, Korea.
| |
Collapse
|
16
|
Klatt MA, Torquato S. Characterization of maximally random jammed sphere packings. III. Transport and electromagnetic properties via correlation functions. Phys Rev E 2018; 97:012118. [PMID: 29448326 DOI: 10.1103/physreve.97.012118] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2017] [Indexed: 06/08/2023]
Abstract
In the first two papers of this series, we characterized the structure of maximally random jammed (MRJ) sphere packings across length scales by computing a variety of different correlation functions, spectral functions, hole probabilities, and local density fluctuations. From the remarkable structural features of the MRJ packings, especially its disordered hyperuniformity, exceptional physical properties can be expected. Here we employ these structural descriptors to estimate effective transport and electromagnetic properties via rigorous bounds, exact expansions, and accurate analytical approximation formulas. These property formulas include interfacial bounds as well as universal scaling laws for the mean survival time and the fluid permeability. We also estimate the principal relaxation time associated with Brownian motion among perfectly absorbing traps. For the propagation of electromagnetic waves in the long-wavelength limit, we show that a dispersion of dielectric MRJ spheres within a matrix of another dielectric material forms, to a very good approximation, a dissipationless disordered and isotropic two-phase medium for any phase dielectric contrast ratio. We compare the effective properties of the MRJ sphere packings to those of overlapping spheres, equilibrium hard-sphere packings, and lattices of hard spheres. Moreover, we generalize results to micro- and macroscopically anisotropic packings of spheroids with tensorial effective properties. The analytic bounds predict the qualitative trend in the physical properties associated with these structures, which provides guidance to more time-consuming simulations and experiments. They especially provide impetus for experiments to design materials with unique bulk properties resulting from hyperuniformity, including structural-color and color-sensing applications.
Collapse
Affiliation(s)
- Michael A Klatt
- Institute of Stochastics, Department of Mathematics, Karlsruhe Institute of Technology, Englerstraße 2, 76131 Karlsruhe, Germany
| | - Salvatore Torquato
- Department of Chemistry, Department of Physics, Princeton Institute for the Science and Technology of Materials, and Program in Applied and Computational Mathematics, Princeton University, Princeton, New Jersey 08544, USA
| |
Collapse
|
17
|
Röding M. Shape-dependent effective diffusivity in packings of hard cubes and cuboids compared with spheres and ellipsoids. SOFT MATTER 2017; 13:8864-8870. [PMID: 29143013 DOI: 10.1039/c7sm01910f] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
We performed computational screening of effective diffusivity in different configurations of cubes and cuboids compared with spheres and ellipsoids. In total, more than 1500 structures are generated and screened for effective diffusivity. We studied simple cubic and face-centered cubic lattices of spheres and cubes, random configurations of cubes and spheres as a function of volume fraction and polydispersity, and finally random configurations of ellipsoids and cuboids as a function of shape. We found some interesting shape-dependent differences in behavior, elucidating the impact of shape on the targeted design of granular materials.
Collapse
Affiliation(s)
- Magnus Röding
- RISE Research Institutes of Sweden, Bioscience and Materials, Göteborg, Sweden.
| |
Collapse
|
18
|
Arnold MD. Single-mode tuning of the plasmon resonance in high-density pillar arrays. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2017; 29:115701. [PMID: 28067633 DOI: 10.1088/1361-648x/aa57c8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
The Maxwell-Garnett (MG) effective medium model has a pure resonance controlled by volume fraction f, but is usually invalid at high density. I present special 2D structures that match quasistatic MG over the entire range 0 < f < 1, in several regular and semi-regular arrays, expanding the applicability of MG. Optimal contours depend on both lattice and fill-factor, transforming from circular at low f to nearly polygonal at high f. A key insight is the direct relationship between optimal surface polarization and surface position. Electrodynamic calculations underline the effect of constituent permittivity on spatial dispersion and required sizes for quasistatic response in various materials.
Collapse
Affiliation(s)
- Matthew D Arnold
- School of Mathematical and Physical Sciences, University of Technology Sydney, PO Box 123, Broadway, NSW 2007, Australia
| |
Collapse
|
19
|
Jeong WC, Sajib SZK, Katoch N, Kim HJ, Kwon OI, Woo EJ. Anisotropic Conductivity Tensor Imaging of In Vivo Canine Brain Using DT-MREIT. IEEE TRANSACTIONS ON MEDICAL IMAGING 2017; 36:124-131. [PMID: 28055828 DOI: 10.1109/tmi.2016.2598546] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
We present in vivo images of anisotropic electrical conductivity tensor distributions inside canine brains using diffusion tensor magnetic resonance electrical impedance tomography (DT-MREIT). The conductivity tensor is represented as a product of an ion mobility tensor and a scale factor of ion concentrations. Incorporating directional mobility information from water diffusion tensors, we developed a stable process to reconstruct anisotropic conductivity tensor images from measured magnetic flux density data using an MRI scanner. Devising a new image reconstruction algorithm, we reconstructed anisotropic conductivity tensor images of two canine brains with a pixel size of 1.25 mm. Though the reconstructed conductivity values matched well in general with those measured by using invasive probing methods, there were some discrepancies as well. The degree of white matter anisotropy was 2 to 4.5, which is smaller than previous findings of 5 to 10. The reconstructed conductivity value of the cerebrospinal fluid was about 1.3 S/m, which is smaller than previous measurements of about 1.8 S/m. Future studies of in vivo imaging experiments with disease models should follow this initial trial to validate clinical significance of DT-MREIT as a new diagnostic imaging modality. Applications in modeling and simulation studies of bioelectromagnetic phenomena including source imaging and electrical stimulation are also promising.
Collapse
|
20
|
Zhang G, Stillinger FH, Torquato S. Transport, geometrical, and topological properties of stealthy disordered hyperuniform two-phase systems. J Chem Phys 2016; 145:244109. [DOI: 10.1063/1.4972862] [Citation(s) in RCA: 43] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
|
21
|
Torquato S. Disordered hyperuniform heterogeneous materials. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2016; 28:414012. [PMID: 27545746 DOI: 10.1088/0953-8984/28/41/414012] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
Disordered hyperuniform many-body systems are distinguishable states of matter that lie between a crystal and liquid: they are like perfect crystals in the way they suppress large-scale density fluctuations and yet are like liquids or glasses in that they are statistically isotropic with no Bragg peaks. These systems play a vital role in a number of fundamental and applied problems: glass formation, jamming, rigidity, photonic and electronic band structure, localization of waves and excitations, self-organization, fluid dynamics, quantum systems, and pure mathematics. Much of what we know theoretically about disordered hyperuniform states of matter involves many-particle systems. In this paper, we derive new rigorous criteria that disordered hyperuniform two-phase heterogeneous materials must obey and explore their consequences. Two-phase heterogeneous media are ubiquitous; examples include composites and porous media, biological media, foams, polymer blends, granular media, cellular solids, and colloids. We begin by obtaining some results that apply to hyperuniform two-phase media in which one phase is a sphere packing in d-dimensional Euclidean space [Formula: see text]. Among other results, we rigorously establish the requirements for packings of spheres of different sizes to be 'multihyperuniform'. We then consider hyperuniformity for general two-phase media in [Formula: see text]. Here we apply realizability conditions for an autocovariance function and its associated spectral density of a two-phase medium, and then incorporate hyperuniformity as a constraint in order to derive new conditions. We show that some functional forms can immediately be eliminated from consideration and identify other forms that are allowable. Specific examples and counterexamples are described. Contact is made with well-known microstructural models (e.g. overlapping spheres and checkerboards) as well as irregular phase-separation and Turing-type patterns. We also ascertain a family of autocovariance functions (or spectral densities) that are realizable by disordered hyperuniform two-phase media in any space dimension, and present select explicit constructions of realizations. These studies provide insight into the nature of disordered hyperuniformity in the context of heterogeneous materials and have implications for the design of such novel amorphous materials.
Collapse
Affiliation(s)
- Salvatore Torquato
- Department of Chemistry, Princeton University, Princeton, NJ 08544, USA. Department of Physics, Princeton University, Princeton, NJ 08544, USA. Princeton Institute for the Science and Technology of Materials, Princeton, NJ 08544, USA. Program in Applied and Computational Mathematics, Princeton University, Princeton, NJ 08544, USA
| |
Collapse
|
22
|
Abstract
Disordered many-particle hyperuniform systems are exotic amorphous states of matter that lie between crystal and liquid: They are like perfect crystals in the way they suppress large-scale density fluctuations and yet are like liquids or glasses in that they are statistically isotropic with no Bragg peaks. These exotic states of matter play a vital role in a number of problems across the physical, mathematical as well as biological sciences and, because they are endowed with novel physical properties, have technological importance. Given the fundamental as well as practical importance of disordered hyperuniform systems elucidated thus far, it is natural to explore the generalizations of the hyperuniformity notion and its consequences. In this paper, we substantially broaden the hyperuniformity concept along four different directions. This includes generalizations to treat fluctuations in the interfacial area (one of the Minkowski functionals) in heterogeneous media and surface-area driven evolving microstructures, random scalar fields, divergence-free random vector fields, and statistically anisotropic many-particle systems and two-phase media. In all cases, the relevant mathematical underpinnings are formulated and illustrative calculations are provided. Interfacial-area fluctuations play a major role in characterizing the microstructure of two-phase systems (e.g., fluid-saturated porous media), physical properties that intimately depend on the geometry of the interface, and evolving two-phase microstructures that depend on interfacial energies (e.g., spinodal decomposition). In the instances of random vector fields and statistically anisotropic structures, we show that the standard definition of hyperuniformity must be generalized such that it accounts for the dependence of the relevant spectral functions on the direction in which the origin in Fourier space is approached (nonanalyticities at the origin). Using this analysis, we place some well-known energy spectra from the theory of isotropic turbulence in the context of this generalization of hyperuniformity. Among other results, we show that there exist many-particle ground-state configurations in which directional hyperuniformity imparts exotic anisotropic physical properties (e.g., elastic, optical, and acoustic characteristics) to these states of matter. Such tunability could have technological relevance for manipulating light and sound waves in ways heretofore not thought possible. We show that disordered many-particle systems that respond to external fields (e.g., magnetic and electric fields) are a natural class of materials to look for directional hyperuniformity. The generalizations of hyperuniformity introduced here provide theoreticians and experimentalists new avenues to understand a very broad range of phenomena across a variety of fields through the hyperuniformity "lens."
Collapse
Affiliation(s)
- Salvatore Torquato
- Department of Chemistry, Department of Physics, Princeton Center for Theoretical Science, Program of Applied and Computational Mathematics, Princeton Institute for the Science and Technology of Materials, Princeton University, Princeton, New Jersey 08544, USA
| |
Collapse
|
23
|
Klatt MA, Torquato S. Characterization of maximally random jammed sphere packings. II. Correlation functions and density fluctuations. Phys Rev E 2016; 94:022152. [PMID: 27627291 DOI: 10.1103/physreve.94.022152] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2016] [Indexed: 06/06/2023]
Abstract
In the first paper of this series, we introduced Voronoi correlation functions to characterize the structure of maximally random jammed (MRJ) sphere packings across length scales. In the present paper, we determine a variety of different correlation functions that arise in rigorous expressions for the effective physical properties of MRJ sphere packings and compare them to the corresponding statistical descriptors for overlapping spheres and equilibrium hard-sphere systems. Such structural descriptors arise in rigorous bounds and formulas for effective transport properties, diffusion and reactions constants, elastic moduli, and electromagnetic characteristics. First, we calculate the two-point, surface-void, and surface-surface correlation functions, for which we derive explicit analytical formulas for finite hard-sphere packings. We show analytically how the contact Dirac delta function contribution to the pair correlation function g_{2}(r) for MRJ packings translates into distinct functional behaviors of these two-point correlation functions that do not arise in the other two models examined here. Then we show how the spectral density distinguishes the MRJ packings from the other disordered systems in that the spectral density vanishes in the limit of infinite wavelengths; i.e., these packings are hyperuniform, which means that density fluctuations on large length scales are anomalously suppressed. Moreover, for all model systems, we study and compute exclusion probabilities and pore size distributions, as well as local density fluctuations. We conjecture that for general disordered hard-sphere packings, a central limit theorem holds for the number of points within an spherical observation window. Our analysis links problems of interest in material science, chemistry, physics, and mathematics. In the third paper of this series, we will evaluate bounds and estimates of a host of different physical properties of the MRJ sphere packings that are based on the structural characteristics analyzed in this paper.
Collapse
Affiliation(s)
- Michael A Klatt
- Karlsruhe Institute of Technology (KIT), Institute of Stochastics, Englerstraße 2, 76131 Karlsruhe, Germany
| | - Salvatore Torquato
- Department of Chemistry, Department of Physics, Princeton Institute for the Science and Technology of Materials, and Program in Applied and Computational Mathematics, Princeton University, Princeton, New Jersey 08544, USA
| |
Collapse
|
24
|
Ma W, Demonte TP, Nachman AI, Elsaid NMH, Joy MLG. Experimental implementation of a new method of imaging anisotropic electric conductivities. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2015; 2013:6437-40. [PMID: 24111215 DOI: 10.1109/embc.2013.6611028] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
This paper presents the first experiment of imaging anisotropic impedance using a novel technique called Diffusion Tensor Current Density Impedance Imaging (DTCD-II). A biological anisotropic tissue phantom was constructed and an experimental implementation of the new method was performed. The results show that DT-CD-II is an effective way of non-invasively measuring anisotropic conductivity in biological media. The cross-property factor between the diffusion tensor and the conductivity tensor has been carefully determined from the experimental data, and shown to be spatially inhomogeneous. The results show that this novel imaging approach has the potential to provide valuable new information on tissue properties.
Collapse
|
25
|
Kwon OI, Sajib SZK, Sersa I, Oh TI, Jeong WC, Kim HJ, Woo EJ. Current Density Imaging During Transcranial Direct Current Stimulation Using DT-MRI and MREIT: Algorithm Development and Numerical Simulations. IEEE Trans Biomed Eng 2015; 63:168-75. [PMID: 26111387 DOI: 10.1109/tbme.2015.2448555] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
OBJECTIVE Transcranial direct current stimulation (tDCS) is a neuromodulatory technique for neuropsychiatric diseases and neurological disorders. In the tDCS treatment, dc current is injected into the head through a pair of electrodes attached on the scalp over a target region. A current density imaging method is needed to quantitatively visualize the internal current density distribution during the tDCS treatment. METHODS We developed a novel current density image reconstruction algorithm using 1) a subject specific segmented 3-D head model, 2) diffusion tensor data, and 3) magnetic flux density data induced by the tDCS current. We acquired T1 weighted and diffusion tensor images of the head using the MRI scanner before the treatment. During the treatment, we can measure the induced magnetic flux density data using a magnetic resonance electrical impedance tomography (MREIT) pulse sequence. In this paper, the magnetic flux density data were numerically generated. RESULTS Numerical simulation results show that the proposed method successfully recovers the current density distribution including the effects of the anisotropic, as well as isotropic conductivity values of different tissues in the head. CONCLUSION The proposed current density imaging method using DT-MRI and MREIT can reliably recover cross-sectional images of the current density distribution during the tDCS treatment. SIGNIFICANCE Success of the tDCS treatment depends on a precise determination of the induced current density distribution within different anatomical structures of the brain. Quantitative visualization of the current density distribution in the brain will play an important role in understanding the effects of the electrical stimulation.
Collapse
|
26
|
Kwon OI, Jeong WC, Sajib SZK, Kim HJ, Woo EJ. Anisotropic conductivity tensor imaging in MREIT using directional diffusion rate of water molecules. Phys Med Biol 2014; 59:2955-74. [PMID: 24841854 DOI: 10.1088/0031-9155/59/12/2955] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
Magnetic resonance electrical impedance tomography (MREIT) is an emerging method to visualize electrical conductivity and/or current density images at low frequencies (below 1 KHz). Injecting currents into an imaging object, one component of the induced magnetic flux density is acquired using an MRI scanner for isotropic conductivity image reconstructions. Diffusion tensor MRI (DT-MRI) measures the intrinsic three-dimensional diffusion property of water molecules within a tissue. It characterizes the anisotropic water transport by the effective diffusion tensor. Combining the DT-MRI and MREIT techniques, we propose a novel direct method for absolute conductivity tensor image reconstructions based on a linear relationship between the water diffusion tensor and the electrical conductivity tensor. We first recover the projected current density, which is the best approximation of the internal current density one can obtain from the measured single component of the induced magnetic flux density. This enables us to estimate a scale factor between the diffusion tensor and the conductivity tensor. Combining these values at all pixels with the acquired diffusion tensor map, we can quantitatively recover the anisotropic conductivity tensor map. From numerical simulations and experimental verifications using a biological tissue phantom, we found that the new method overcomes the limitations of each method and successfully reconstructs both the direction and magnitude of the conductivity tensor for both the anisotropic and isotropic regions.
Collapse
Affiliation(s)
- Oh In Kwon
- Department of Mathematics, Konkuk University, Seoul, Korea
| | | | | | | | | |
Collapse
|
27
|
Hegdal JP, Tofteberg TR, Schjelderup T, Hinrichsen EL, Grytten F, Echtermeyer A. Thermal conductivity of anisotropic, inhomogeneous high-density foam calculated from three-dimensional reconstruction of microtome images. J Appl Polym Sci 2013. [DOI: 10.1002/app.39238] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Jan Peder Hegdal
- Department of Engineering Design and Materials; Norwegian University of Science and Technology; Trondheim 7034 Norway
| | | | | | | | | | - Andreas Echtermeyer
- Department of Engineering Design and Materials; Norwegian University of Science and Technology; Trondheim 7034 Norway
| |
Collapse
|
28
|
Noninvasive measurement of conductivity anisotropy at larmor frequency using MRI. COMPUTATIONAL AND MATHEMATICAL METHODS IN MEDICINE 2013; 2013:421619. [PMID: 23554838 PMCID: PMC3608348 DOI: 10.1155/2013/421619] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/15/2012] [Revised: 01/02/2013] [Accepted: 01/18/2013] [Indexed: 11/17/2022]
Abstract
Anisotropic electrical properties can be found in biological tissues such as muscles and nerves. Conductivity tensor is a simplified model to express the effective electrical anisotropic information and depends on the imaging resolution. The determination of the conductivity tensor should be based on Ohm's law. In other words, the measurement of partial information of current density and the electric fields should be made. Since the direct measurements of the electric field and the current density are difficult, we use MRI to measure their partial information such as B1 map; it measures circulating current density and circulating electric field. In this work, the ratio of the two circulating fields, termed circulating admittivity, is proposed as measures of the conductivity anisotropy at Larmor frequency. Given eigenvectors of the conductivity tensor, quantitative measurement of the eigenvalues can be achieved from circulating admittivity for special tissue models. Without eigenvectors, qualitative information of anisotropy still can be acquired from circulating admittivity. The limitation of the circulating admittivity is that at least two components of the magnetic fields should be measured to capture anisotropic information.
Collapse
|
29
|
Le Quang H, Bonnet G, Pham DC. Bounds and correlation approximation for the effective conductivity of heterogeneous plates. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2011; 84:061153. [PMID: 22304086 DOI: 10.1103/physreve.84.061153] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/29/2011] [Revised: 11/02/2011] [Indexed: 05/31/2023]
Abstract
The size effect obtained when studying the effective properties of plates is investigated by producing a third-order correlation approximation and Hashin-Shtrikman bounds for the effective in-plane conductivity of heterogeneous plates. The boundary condition of the plates is taken into account by obtaining the exact Green operator for the boundary problem. Results are obtained for a two-dimensional (2D) random distribution of disks and a 3D distribution of spheres. All results recover those obtained for an infinite medium when the heterogeneity size becomes small compared to plate thickness. They show that the size effect is more significant in the case of a 2D distribution of heterogeneities than for a 3D distribution.
Collapse
Affiliation(s)
- H Le Quang
- Laboratoire Modélisation et Simulation Multi Echelle, Université Paris-Est, MSME UMR 8208 CNRS, 5 Boulevard Descartes, F-77454 Marne-la-Vallée Cedex 2, France
| | | | | |
Collapse
|
30
|
Modeling Concentration Distribution and Deformation During Convection-Enhanced Drug Delivery into Brain Tissue. Transp Porous Media 2011. [DOI: 10.1007/s11242-011-9894-7] [Citation(s) in RCA: 60] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
|
31
|
Abstract
The holy grail of tumor modeling is to formulate theoretical and computational tools that can be utilized in the clinic to predict neoplastic progression and propose individualized optimal treatment strategies to control cancer growth. In order to develop such a predictive model, one must account for the numerous complex mechanisms involved in tumor growth. Here we review the research work that we have done toward the development of an 'Ising model' of cancer. The Ising model is an idealized statistical-mechanical model of ferromagnetism that is based on simple local-interaction rules, but nonetheless leads to basic insights and features of real magnets, such as phase transitions with a critical point. The review begins with a description of a minimalist four-dimensional (three dimensions in space and one in time) cellular automaton (CA) model of cancer in which cells transition between states (proliferative, hypoxic and necrotic) according to simple local rules and their present states, which can viewed as a stripped-down Ising model of cancer. This model is applied to study the growth of glioblastoma multiforme, the most malignant of brain cancers. This is followed by a discussion of the extension of the model to study the effect on the tumor dynamics and geometry of a mutated subpopulation. A discussion of how tumor growth is affected by chemotherapeutic treatment, including induced resistance, is then described. We then describe how to incorporate angiogenesis as well as the heterogeneous and confined environment in which a tumor grows in the CA model. The characterization of the level of organization of the invasive network around a solid tumor using spanning trees is subsequently discussed. Then, we describe open problems and future promising avenues for future research, including the need to develop better molecular-based models that incorporate the true heterogeneous environment over wide range of length and time scales (via imaging data), cell motility, oncogenes, tumor suppressor genes and cell-cell communication. A discussion about the need to bring to bear the powerful machinery of the theory of heterogeneous media to better understand the behavior of cancer in its microenvironment is presented. Finally, we propose the possibility of using optimization techniques, which have been used profitably to understand physical phenomena, in order to devise therapeutic (chemotherapy/radiation) strategies and to understand tumorigenesis itself.
Collapse
Affiliation(s)
- Salvatore Torquato
- Department of Chemistry, Princeton University, Princeton, NJ 08544, USA.
| |
Collapse
|
32
|
Khundrakpam BS, Shukla VK, Roy PK. Thermal Conduction Tensor Imaging and Energy Flow Analysis of Brain: A Feasibility Study using MRI. Ann Biomed Eng 2010; 38:3070-83. [DOI: 10.1007/s10439-010-9974-9] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2008] [Accepted: 02/16/2010] [Indexed: 10/19/2022]
|
33
|
Lee WH, Liu Z, Mueller BA, Lim K, He B. Influence of white matter anisotropic conductivity on EEG source localization: comparison to fMRI in human primary visual cortex. Clin Neurophysiol 2009; 120:2071-2081. [PMID: 19833554 DOI: 10.1016/j.clinph.2009.09.007] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2009] [Revised: 09/13/2009] [Accepted: 09/14/2009] [Indexed: 10/20/2022]
Abstract
OBJECTIVE The goal of this study was to experimentally investigate the influence of the anisotropy of white matter (WM) conductivity on EEG source localization. METHODS Visual evoked potentials (VEP) and fMRI data were recorded from three human subjects presented with identical visual stimuli. A finite element method was used to solve the EEG forward problems based on both anisotropic and isotropic head models, and single-dipole source localization was subsequently performed to localize the source underlying the N75 VEP component. RESULTS The averaged distances of the localized N75 dipole locations in V1 between the isotropic and anisotropic head models ranged from 0 to 6.22+/-2.83mm. The distances between the localized dipole positions and the centers of the fMRI V1 activations were slightly smaller when using an anisotropic model (7.49+/-1.35-15.70+/-8.60mm) than when using an isotropic model (7.65+/-1.30-15.31+/-9.18mm). CONCLUSIONS Anisotropic models incorporating realistic WM anisotropic conductivity distributions do not substantially improve the accuracy of EEG dipole localization in the primary visual cortex using experimental data obtained using visual stimulation. SIGNIFICANCE The present study represents the first attempt using a human experimental approach to assess the effects of WM anisotropy on EEG source analysis.
Collapse
Affiliation(s)
- Won Hee Lee
- Department of Biomedical Engineering, University of Minnesota, 7-105 BSBE, 312 Church Street, Minneapolis, MN 55455, USA
| | - Zhongming Liu
- Department of Biomedical Engineering, University of Minnesota, 7-105 BSBE, 312 Church Street, Minneapolis, MN 55455, USA
| | - Bryon A Mueller
- Center for Magnetic Resonance Research, Department of Radiology, University of Minnesota, Minneapolis, MN 55455, USA
| | - Kelvin Lim
- Center for Magnetic Resonance Research, Department of Radiology, University of Minnesota, Minneapolis, MN 55455, USA
| | - Bin He
- Department of Biomedical Engineering, University of Minnesota, 7-105 BSBE, 312 Church Street, Minneapolis, MN 55455, USA.
| |
Collapse
|
34
|
Wang K, Zhu S, Mueller B, Lim K, Liu Z, He B. A new method to derive white matter conductivity from diffusion tensor MRI. IEEE Trans Biomed Eng 2008; 55:2481-6. [PMID: 18838374 PMCID: PMC2575121 DOI: 10.1109/tbme.2008.923159] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
We propose a new algorithm to derive the anisotropic conductivity of the cerebral white matter (WM) from the diffusion tensor MRI (DT-MRI) data. The transportation processes for both water molecules and electrical charges are described through a common multicompartment model that consists of axons, glia, or the cerebrospinal fluid (CSF). The volume fraction (VF) of each compartment varies from voxel to voxel and is estimated from the measured diffusion tensor. The conductivity tensor at each voxel is then computed from the estimated VF values and the decomposed eigenvectors of the diffusion tensor. The proposed VF algorithm was applied to the DT-MRI data acquired from two healthy human subjects. The extracted anisotropic conductivity distribution was compared with those obtained by using two existing algorithms, which were based upon a linear conductivity-to-diffusivity relationship and a volume constraint, respectively. The present results suggest that the VF algorithm is capable of incorporating the partial volume effects of the CSF and the intravoxel fiber crossing structure, both of which are not addressed altogether by existing algorithms. Therefore, it holds potential to provide a more accurate estimate of the WM anisotropic conductivity, and may have important applications to neuroscience research or clinical applications in neurology and neurophysiology.
Collapse
Affiliation(s)
- Kun Wang
- College of Electrical Engineering, Zhejiang University, Hangzhou, China
| | - Shanan Zhu
- College of Electrical Engineering, Zhejiang University, Hangzhou, China
| | - Bryon Mueller
- Center for Magnetic Resonance Research, University of Minnesota, USA
| | - Kelvin Lim
- Center for Magnetic Resonance Research, University of Minnesota, USA
| | - Zhongming Liu
- Department of Biomedical Engineering, University of Minnesota, USA
| | - Bin He
- Department of Biomedical Engineering, University of Minnesota, USA
| |
Collapse
|
35
|
Quintanilla JA. Necessary and sufficient conditions for the two-point phase probability function of two-phase random media. Proc Math Phys Eng Sci 2008. [DOI: 10.1098/rspa.2008.0023] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Constructing realizations of random media with a specified two-point phase probability function
S
2
has attracted considerable attention in the recent literature. However, little is known about conditions under which a prescribed
S
2
is realizable. The only known necessary and sufficient condition, due to McMillan, involves a class of square matrices, called corner-positive matrices, about which almost nothing is known except their definition. As a result, McMillan's theorem has gone mostly unused in the literature for over 50 years. In this paper, we present a general decomposition formula for corner-positive matrices, which allows McMillan's theorem to be written in a significantly more tractable and testable form. We also connect McMillan's theorem with many known but heretofore unrelated necessary conditions on
S
2
, extending many of these conditions.
Collapse
Affiliation(s)
- John A Quintanilla
- Department of Mathematics, PO Box 311430, University of North TexasDenton, TX 76203-1430, USA
| |
Collapse
|
36
|
Larsen S, Kikinis R, Talos IF, Weinstein D, Wells W, Golby A. Quantitative comparison of functional MRI and direct electrocortical stimulation for functional mapping. Int J Med Robot 2007; 3:262-70. [PMID: 17763497 PMCID: PMC3733359 DOI: 10.1002/rcs.149] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
BACKGROUND Mapping functional areas of the brain is important for planning tumour resections. With the increased use of functional magnetic resonance imaging (fMRI) for presurgical planning, there is a need to validate that fMRI activation mapping is consistent with the mapping obtained during surgery using direct electrocortical stimulation (DECS). METHODS A quantitative comparison of DECS and fMRI mapping techniques was performed, using a patient-specific conductivity model to find the current distribution resulting from each stimulation site. The resulting DECS stimulation map was compared to the fMRI activation map, using the maximal Dice similarity coefficient (MDSC). RESULTS Our results show some agreement between these two mapping techniques--the stimulation site with the largest MOSC was the only site that demonstrated intra-operative effect. CONCLUSIONS There is a substantial effort to improve the techniques used to map functional areas, particularly using fMRI. It seems likely that fMRI will eventually provide a valid non-invasive means for functional mapping.
Collapse
Affiliation(s)
- S. Larsen
- Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, MA, USA
| | - R. Kikinis
- Surgical Planning Laboratory, Department of Radiology, Brigham and Women’s Hospital, Boston, MA, USA
| | - I.-F. Talos
- Surgical Planning Laboratory, Department of Radiology, Brigham and Women’s Hospital, Boston, MA, USA
| | - D. Weinstein
- Scientific Computing Institute, University of Utah, Salt Lake City, UT, USA
| | - W. Wells
- Surgical Planning Laboratory, Department of Radiology, Brigham and Women’s Hospital, Boston, MA, USA
| | - A. Golby
- Department of Neurosurgery, Brigham and Women’s and Chldren’s Hospitals, Boston, MA, USA
| |
Collapse
|
37
|
Mejdoubi A, Brosseau C. Finite-element simulation of the depolarization factor of arbitrarily shaped inclusions. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2006; 74:031405. [PMID: 17025633 DOI: 10.1103/physreve.74.031405] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/26/2006] [Revised: 08/12/2006] [Indexed: 05/12/2023]
Abstract
An understanding of the polarization characteristics is a prevailing issue in electrostatics and scattering theory and is also vital to the rational design of future dielectric nanostructures. In this work, a finite-element methodology has been applied to simulate two-phase heterostructures containing a polarizable dielectric inclusion. The inclusions investigated can be considered as arbitrarily shaped cross sections of infinite three-dimensional objects, where the properties and characteristics are invariant along the perpendicular cross-sectional plane. Given the paucity of experimental and numerical data, we set out to systematically investigate the trends that shape and permittivity contrast between the inclusion and the host matrix have on the depolarization factor (DF). The effect of the first-versus second-order concentration virial coefficient on the value of the DF is considered for a variety of inclusion shapes and a large set of material properties. Our findings suggest that the DF for such inclusions is highly tunable depending on the choice of these parameters. These results can provide a useful insight for the design of artificial two-phase heterostructures with specific polarization properties.
Collapse
Affiliation(s)
- Abdelilah Mejdoubi
- Laboratoire d'Electronique et Systèmes de Télécommunications, Université de Bretagne Occidentale, CS 93837, 6 avenue Le Gorgeu, 29238 Brest Cedex 3, France
| | | |
Collapse
|
38
|
Quintanilla J. Microstructure and properties of random heterogeneous materials: A review of theoretical results. POLYM ENG SCI 2004. [DOI: 10.1002/pen.11446] [Citation(s) in RCA: 39] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
|
39
|
Haueisen J, Tuch DS, Ramon C, Schimpf PH, Wedeen VJ, George JS, Belliveau JW. The influence of brain tissue anisotropy on human EEG and MEG. Neuroimage 2002; 15:159-66. [PMID: 11771984 DOI: 10.1006/nimg.2001.0962] [Citation(s) in RCA: 138] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
The influence of gray and white matter tissue anisotropy on the human electroencephalogram (EEG) and magnetoencephalogram (MEG) was examined with a high resolution finite element model of the head of an adult male subject. The conductivity tensor data for gray and white matter were estimated from magnetic resonance diffusion tensor imaging. Simulations were carried out with single dipoles or small extended sources in the cortical gray matter. The inclusion of anisotropic volume conduction in the brain was found to have a minor influence on the topology of EEG and MEG (and hence source localization). We found a major influence on the amplitude of EEG and MEG (and hence source strength estimation) due to the change in conductivity and the inclusion of anisotropy. We expect that inclusion of tissue anisotropy information will improve source estimation procedures.
Collapse
Affiliation(s)
- J Haueisen
- Biomagnetisches Zentrum, Friedrich-Schiller-Universität, Jena, Germany
| | | | | | | | | | | | | |
Collapse
|
40
|
Tuch DS, Wedeen VJ, Dale AM, George JS, Belliveau JW. Conductivity tensor mapping of the human brain using diffusion tensor MRI. Proc Natl Acad Sci U S A 2001; 98:11697-701. [PMID: 11573005 PMCID: PMC58792 DOI: 10.1073/pnas.171473898] [Citation(s) in RCA: 280] [Impact Index Per Article: 11.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2001] [Indexed: 11/18/2022] Open
Abstract
Knowledge of the electrical conductivity properties of excitable tissues is essential for relating the electromagnetic fields generated by the tissue to the underlying electrophysiological currents. Efforts to characterize these endogenous currents from measurements of the associated electromagnetic fields would significantly benefit from the ability to measure the electrical conductivity properties of the tissue noninvasively. Here, using an effective medium approach, we show how the electrical conductivity tensor of tissue can be quantitatively inferred from the water self-diffusion tensor as measured by diffusion tensor magnetic resonance imaging. The effective medium model indicates a strong linear relationship between the conductivity and diffusion tensor eigenvalues (respectively, final sigma and d) in agreement with theoretical bounds and experimental measurements presented here (final sigma/d approximately 0.844 +/- 0.0545 S small middle dots/mm(3), r(2) = 0.945). The extension to other biological transport phenomena is also discussed.
Collapse
Affiliation(s)
- D S Tuch
- Massachusetts General Hospital, NMR Center, 149 13th Street, Charlestown, MA 02129, USA.
| | | | | | | | | |
Collapse
|
41
|
|
42
|
Quintanilla J. Microstructure functions for random media with impenetrable particles. PHYSICAL REVIEW. E, STATISTICAL PHYSICS, PLASMAS, FLUIDS, AND RELATED INTERDISCIPLINARY TOPICS 1999; 60:5788-94. [PMID: 11970476 DOI: 10.1103/physreve.60.5788] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/13/1999] [Indexed: 04/18/2023]
Abstract
We introduce a model consisting of nonaligned and impenetrable particles. This model is obtained by placing particles of random orientation within "security spheres," typically chosen to be spheres in thermal equilibrium. The particles in general are allowed to be nonspherical. We obtain an analytical expression for the function S(n), the probability that n points simultaneously lie outside of the particle phase. This characterization of the microstructure appears in certain rigorous bounds on the effective properties of random materials. We also evaluate S2 for various specific examples of this model, including nonaligned impenetrable ellipsoids.
Collapse
Affiliation(s)
- J Quintanilla
- Department of Mathematics, University of North Texas, Denton, Texas 76203, USA.
| |
Collapse
|
43
|
Quintanilla J, Torquato S. Percolation for a model of statistically inhomogeneous random media. J Chem Phys 1999. [DOI: 10.1063/1.479890] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
|
44
|
Quintanilla J, Torquato S. Microstructure and conductivity of hierarchical laminate composites. PHYSICAL REVIEW. E, STATISTICAL PHYSICS, PLASMAS, FLUIDS, AND RELATED INTERDISCIPLINARY TOPICS 1996; 53:4368-4378. [PMID: 9964770 DOI: 10.1103/physreve.53.4368] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
|
45
|
Helsing J. Transport properties of two-dimensional tilings with corners. PHYSICAL REVIEW. B, CONDENSED MATTER 1991; 44:11677-11682. [PMID: 9999300 DOI: 10.1103/physrevb.44.11677] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/12/2023]
|
46
|
|