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Ohga N, Ito S, Kolchinsky A. Thermodynamic Bound on the Asymmetry of Cross-Correlations. PHYSICAL REVIEW LETTERS 2023; 131:077101. [PMID: 37656850 DOI: 10.1103/physrevlett.131.077101] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/11/2023] [Accepted: 06/08/2023] [Indexed: 09/03/2023]
Abstract
The principle of microscopic reversibility says that, in equilibrium, two-time cross-correlations are symmetric under the exchange of observables. Thus, the asymmetry of cross-correlations is a fundamental, measurable, and often-used statistical signature of deviation from equilibrium. Here we find a simple and universal inequality that bounds the magnitude of asymmetry by the cycle affinity, i.e., the strength of thermodynamic driving. Our result applies to a large class of systems and all state observables, and it suggests a fundamental thermodynamic cost for various nonequilibrium functions quantified by the asymmetry. It also provides a powerful tool to infer affinity from measured cross-correlations, in a different and complementary way to the thermodynamic uncertainty relations. As an application, we prove a thermodynamic bound on the coherence of noisy oscillations, which was previously conjectured by Barato and Seifert [Phys. Rev. E 95, 062409 (2017)PRESCM2470-004510.1103/PhysRevE.95.062409]. We also derive a thermodynamic bound on directed information flow in a biochemical signal transduction model.
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Affiliation(s)
- Naruo Ohga
- Department of Physics, Graduate School of Science, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan
| | - Sosuke Ito
- Department of Physics, Graduate School of Science, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan
- Universal Biology Institute, Graduate School of Science, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan
| | - Artemy Kolchinsky
- Universal Biology Institute, Graduate School of Science, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan
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Awasthi S, Dutta SB. Oscillating states of driven Langevin systems under large viscous drives. Phys Rev E 2022; 106:064116. [PMID: 36671127 DOI: 10.1103/physreve.106.064116] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2022] [Accepted: 11/15/2022] [Indexed: 12/23/2022]
Abstract
We provide a perturbative scheme that is suitable to study oscillating states in driven Langevin systems in the large viscous regime. We explicitly determine the oscillating state distribution of an underdamped Brownian particle driven by a time-dependent periodic potential. Apart from the harmonic and anharmonic parameters of the potential, the noise strength and the viscous parameter (or equivalently their ratio referred to as the thermal parameter), which appear in the dynamics of the Brownian particle, are also driven periodically. We specify various nonequilibrium observables, relevant to characterize the oscillating states, and evaluate them to linear order in anharmonic perturbation. We find that the effect of viscous drives on oscillating states is measurable even at leading order and show that the thermodynamic properties of the system in these states are significantly distinct from those in equilibrium or even from those exhibited by oscillating states of overdamped driven systems.
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Affiliation(s)
- Shakul Awasthi
- School of Physics, Indian Institute of Science Education and Research Thiruvananthapuram, Thiruvananthapuram 695551, India
| | - Sreedhar B Dutta
- School of Physics, Indian Institute of Science Education and Research Thiruvananthapuram, Thiruvananthapuram 695551, India
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Awasthi S, Dutta SB. Oscillating states of periodically driven anharmonic Langevin systems. Phys Rev E 2021; 103:062143. [PMID: 34271645 DOI: 10.1103/physreve.103.062143] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2021] [Accepted: 05/28/2021] [Indexed: 11/07/2022]
Abstract
We investigate the asymptotic distributions of periodically driven anharmonic Langevin systems. Utilizing the underlying SL_{2} symmetry of the Langevin dynamics, we develop a perturbative scheme in which the effect of periodic driving can be treated nonperturbatively to any order of perturbation in anharmonicity. We spell out the conditions under which the asymptotic distributions exist and are periodic and show that the distributions can be determined exactly in terms of the solutions of the associated Hill equations. We further find that the oscillating states of these driven systems are stable against anharmonic perturbations.
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Affiliation(s)
- Shakul Awasthi
- School of Physics, Indian Institute of Science Education and Research Thiruvananthapuram, Thiruvananthapuram 695551, India
| | - Sreedhar B Dutta
- School of Physics, Indian Institute of Science Education and Research Thiruvananthapuram, Thiruvananthapuram 695551, India
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Oberreiter L, Seifert U, Barato AC. Stochastic Discrete Time Crystals: Entropy Production and Subharmonic Synchronization. PHYSICAL REVIEW LETTERS 2021; 126:020603. [PMID: 33512201 DOI: 10.1103/physrevlett.126.020603] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/17/2020] [Revised: 06/24/2020] [Accepted: 12/22/2020] [Indexed: 06/12/2023]
Abstract
Discrete time crystals are periodically driven systems that display spontaneous symmetry breaking of time translation invariance in the form of indefinite subharmonic oscillations. We introduce a thermodynamically consistent model for a discrete time crystal and analyze it using the framework of stochastic thermodynamics. In particular, we evaluate the rate of energy dissipation of this many-body system of interacting noisy subharmonic oscillators in contact with a heat bath. The mean-field model displays the phenomenon of subharmonic synchronization, which corresponds to collective subharmonic oscillations of the individual units. The 2D model does not display synchronization but it does show a time-crystalline phase, which is characterized by a power-law behavior of the number of coherent subharmonic oscillations with system size. This result demonstrates that the emergence of coherent oscillations is possible even in the absence of synchronization.
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Affiliation(s)
- Lukas Oberreiter
- II. Institut für Theoretische Physik, Universität Stuttgart, 70550 Stuttgart, Germany
| | - Udo Seifert
- II. Institut für Theoretische Physik, Universität Stuttgart, 70550 Stuttgart, Germany
| | - Andre C Barato
- Department of Physics, University of Houston, Houston, Texas 77204, USA
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Fritz JH, Nguyen B, Seifert U. Stochastic thermodynamics of chemical reactions coupled to finite reservoirs: A case study for the Brusselator. J Chem Phys 2020; 152:235101. [PMID: 32571070 DOI: 10.1063/5.0006115] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Biomolecular processes are typically modeled using chemical reaction networks coupled to infinitely large chemical reservoirs. A difference in chemical potential between these reservoirs can drive the system into a non-equilibrium steady-state (NESS). In reality, these processes take place in finite systems containing a finite number of molecules. In such systems, a NESS can be reached with the help of an externally driven pump for which we introduce a simple model. The crucial parameters are the pumping rate and the finite size of the chemical reservoir. We apply this model to a simple biochemical oscillator, the Brusselator, and quantify the performance using the number of coherent oscillations. As a surprising result, we find that higher precision can be achieved with finite-size reservoirs even though the corresponding current fluctuations are larger than in the ideal infinite case.
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Affiliation(s)
- Jonas H Fritz
- II. Institut für Theoretische Physik, Universität Stuttgart, 70550 Stuttgart, Germany
| | - Basile Nguyen
- II. Institut für Theoretische Physik, Universität Stuttgart, 70550 Stuttgart, Germany
| | - Udo Seifert
- II. Institut für Theoretische Physik, Universität Stuttgart, 70550 Stuttgart, Germany
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De Martino D, Barato AC. Oscillations in feedback-driven systems: Thermodynamics and noise. Phys Rev E 2020; 100:062123. [PMID: 31962493 DOI: 10.1103/physreve.100.062123] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2019] [Indexed: 11/07/2022]
Abstract
Oscillations in nonequilibrium noisy systems are important physical phenomena. These oscillations can happen in autonomous biochemical oscillators such as circadian clocks. They can also manifest as subharmonic oscillations in periodically driven systems such as time crystals. Oscillations in autonomous systems and, to a lesser degree, subharmonic oscillations in periodically driven systems have been both thoroughly investigated, including their relation with thermodynamic cost and noise. We perform a systematic study of oscillations in a third class of nonequilibrium systems: feedback-driven systems. In particular, we use the apparatus of stochastic thermodynamics to investigate the role of noise and thermodynamic cost in feedback-driven oscillations. For a simple two-state model that displays oscillations, we analyze the relation between precision and dissipation, revealing that oscillations can remain coherent for an indefinite time in a finite system with thermal fluctuations in a limit of diverging thermodynamic cost. We consider oscillations in a more complex system with several degrees of freedom, an Ising model driven by feedback between the magnetization and the external field. This feedback-driven system can display subharmonic oscillations similar to the ones observed in time crystals. We illustrate the second law for feedback-driven systems that display oscillations. For the Ising model, the oscillating dissipated heat can be negative. However, when we consider the total entropy that also includes an informational term related to measurements, the oscillating total entropy change is always positive. We also study the finite-size scaling of the dissipated heat, providing evidence for the existence of a first-order phase transition for certain parameter regimes.
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Affiliation(s)
- Daniele De Martino
- Jozef Stefan Institute, Jamova Cesta 39, 1000 Ljubjlana, Slovenia.,Instituto Biofisika (UPV/EHU, CSIC), University of the Basque Country, Leioa E-48940, Spain.,Ikerbasque, Basque Foundation for Science, Bilbao 48013, Spain
| | - Andre C Barato
- Department of Physics, University of Houston, Houston, Texas 77204, USA
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Gambetta FM, Carollo F, Lazarides A, Lesanovsky I, Garrahan JP. Classical stochastic discrete time crystals. Phys Rev E 2019; 100:060105. [PMID: 31962402 DOI: 10.1103/physreve.100.060105] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2019] [Indexed: 06/10/2023]
Abstract
We describe a general and simple paradigm for discrete time crystals (DTCs), systems with a stable subharmonic response to an external driving field, in a classical thermal setting. We consider, specifically, an Ising model in two dimensions, as a prototypical system with a phase transition into stable phases distinguished by a local order parameter, driven by thermal dynamics and periodically kicked with a noisy protocol. By means of extensive numerical simulations for large sizes-allowed by the classical nature of our model-we show that the system features a true disorder-DTC order phase transition as a function of the noise strength, with a robust DTC phase extending over a wide parameter range. We demonstrate that, when the dynamics is observed stroboscopically, the phase transition to the DTC state appears to be in the equilibrium two-dimensional Ising universality class. However, we explicitly show that the DTC is a genuine nonequilibrium state. More generally, we speculate that systems with thermal phase transitions to multiple competing phases can give rise to DTCs when appropriately driven.
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Affiliation(s)
- F M Gambetta
- School of Physics and Astronomy and Centre for the Mathematics and Theoretical Physics of Quantum Non-Equilibrium Systems, University of Nottingham, Nottingham NG7 2RD, United Kingdom
| | - F Carollo
- School of Physics and Astronomy and Centre for the Mathematics and Theoretical Physics of Quantum Non-Equilibrium Systems, University of Nottingham, Nottingham NG7 2RD, United Kingdom
| | - A Lazarides
- Interdisciplinary Centre for Mathematical Modelling and Department of Mathematical Sciences, Loughborough University, Loughborough LE11 3TU, United Kingdom
| | - I Lesanovsky
- School of Physics and Astronomy and Centre for the Mathematics and Theoretical Physics of Quantum Non-Equilibrium Systems, University of Nottingham, Nottingham NG7 2RD, United Kingdom
- Institut für Theoretische Physik, Universität Tübingen, Tübingen 72076, Germany
| | - J P Garrahan
- School of Physics and Astronomy and Centre for the Mathematics and Theoretical Physics of Quantum Non-Equilibrium Systems, University of Nottingham, Nottingham NG7 2RD, United Kingdom
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