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Mankin R, Rekker A, Paekivi S. Statistical moments of the interspike intervals for a neuron model driven by trichotomous noise. Phys Rev E 2021; 103:062201. [PMID: 34271748 DOI: 10.1103/physreve.103.062201] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2021] [Accepted: 05/14/2021] [Indexed: 11/07/2022]
Abstract
The influence of a colored three-level input noise (trichotomous noise) on the spike generation of a perfect integrate-and-fire (PIF) model of neurons is studied. Using a first-passage-time formulation, exact expressions for the Laplace transform of the output interspike interval (ISI) density and for the statistical moments of the ISIs (such as the coefficient of variation, the skewness, the serial correlation coefficient, and the Fano factor) are derived. To model the anomalous subdiffusion that can arise from, e.g., the trapping properties of dendritic spines, the model is extended by including a random operational time in the form of an inverse strictly increasing Lévy-type subordinator, and exact formulas for ISI statistics are given for this case as well. Particularly, it is shown that at some parameter regimes, the ISI density exhibits a three-modal structure. The results for the extended model show that the ISI serial correlation coefficient and the Fano factor are nonmonotonic with respect to the input current, which indicates that at an intermediate value of the input current the variability of the output spike trains is minimal. Similarities and differences between the behavior of the presented models and the previously investigated PIF models driven by dichotomous noise are also discussed.
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Affiliation(s)
- Romi Mankin
- School of Natural Sciences and Health, Tallinn University, 29 Narva Road, 10120 Tallinn, Estonia
| | - Astrid Rekker
- School of Natural Sciences and Health, Tallinn University, 29 Narva Road, 10120 Tallinn, Estonia
| | - Sander Paekivi
- School of Natural Sciences and Health, Tallinn University, 29 Narva Road, 10120 Tallinn, Estonia
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Mankin R, Lumi N. Statistics of a leaky integrate-and-fire model of neurons driven by dichotomous noise. Phys Rev E 2016; 93:052143. [PMID: 27300865 DOI: 10.1103/physreve.93.052143] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2016] [Indexed: 06/06/2023]
Abstract
The behavior of a stochastic leaky integrate-and-fire model of neurons is considered. The effect of temporally correlated random neuronal input is modeled as a colored two-level (dichotomous) Markovian noise. Relying on the Riemann method, exact expressions for the output interspike interval density and for the serial correlation coefficient are derived, and their dependence on noise parameters (such as correlation time and amplitude) is analyzed. Particularly, noise-induced sign reversal and a resonancelike amplification of the kurtosis of the interspike interval distribution are established. The features of spike statistics, analytically revealed in our study, are compared with recently obtained results for a perfect integrate-and-fire neuron model.
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Affiliation(s)
- Romi Mankin
- School of Natural Sciences and Health, Tallinn University, 29 Narva Road, 10120 Tallinn, Estonia
| | - Neeme Lumi
- School of Natural Sciences and Health, Tallinn University, 29 Narva Road, 10120 Tallinn, Estonia
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Mankin R, Laas K, Lumi N, Rekker A. Cage effect for the velocity correlation functions of a Brownian particle in viscoelastic shear flows. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2014; 90:042127. [PMID: 25375458 DOI: 10.1103/physreve.90.042127] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/03/2014] [Indexed: 06/04/2023]
Abstract
The long-time limit behavior of velocity correlation functions (VCFs) for an underdamped Brownian particle in an oscillatory viscoelastic shear flow is investigated using the generalized Langevin equation with a power-law memory kernel. The influence of a fluctuating environment is modeled by an additive external fractional Gaussian noise. The exact expressions of the correlation functions of the fluctuating components of velocity for the Brownian particle in the shear plane have been calculated. Also, the particle's angular momentum is found. It is shown that in a certain region of the system parameters an interplay of the shear flow, memory effects, and external noise can induce a bounded long-time behavior of the VCFs, even in the shear flow direction, where in the case of internal noise the velocity process is subdiffusive, i.e., unbounded in time. Moreover, we find resonant behavior of the VCFs and the angular momentum versus the shear oscillation frequency, implying that they can be efficiently excited by oscillatory shear. The role of the initial positional distribution of particles is also discussed.
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Affiliation(s)
- Romi Mankin
- Institute of Mathematics and Natural Sciences, Tallinn University, 29 Narva Road, 10120 Tallinn, Estonia
| | - Katrin Laas
- Institute of Mathematics and Natural Sciences, Tallinn University, 29 Narva Road, 10120 Tallinn, Estonia
| | - Neeme Lumi
- Institute of Mathematics and Natural Sciences, Tallinn University, 29 Narva Road, 10120 Tallinn, Estonia
| | - Astrid Rekker
- Institute of Mathematics and Natural Sciences, Tallinn University, 29 Narva Road, 10120 Tallinn, Estonia
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Mankin R, Laas K, Lumi N. Memory effects for a trapped Brownian particle in viscoelastic shear flows. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2013; 88:042142. [PMID: 24229150 DOI: 10.1103/physreve.88.042142] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/19/2013] [Indexed: 06/02/2023]
Abstract
The long-time limit behavior of the positional distribution for an underdamped Brownian particle in a fluctuating harmonic potential well, which is simultaneously exposed to an oscillatory viscoelastic shear flow is investigated using the generalized Langevin equation with a power-law-type memory kernel. The influence of a fluctuating environment is modeled by a multiplicative white noise (fluctuations of the stiffness of the trapping potential) and by an additive internal fractional Gaussian noise. The exact expressions of the second-order moments of the fluctuating position for the Brownian particle in the shear plane have been calculated. Also, shear-induced cross correlation between particle fluctuations along orthogonal directions as well as the angular momentum are found. It is shown that interplay of shear flow, memory, and multiplicative noise can generate a variety of cooperation effects, such as energetic instability, multiresonance versus the shear frequency, and memory-induced anomalous diffusion in the direction of the shear flow. Particularly, two different critical memory exponents have been found, which mark dynamical transitions from a stationary regime to a subdiffusive (or superdiffusive) regime of the system. Similarities and differences between the behaviors of the models with oscillatory and nonoscillatory shear flow are also discussed.
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Affiliation(s)
- Romi Mankin
- Institute of Mathematics and Natural Sciences, Tallinn University, 29 Narva Road, 10120 Tallinn, Estonia
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Mankin R, Laas K, Sauga A. Generalized Langevin equation with multiplicative noise: temporal behavior of the autocorrelation functions. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2011; 83:061131. [PMID: 21797326 DOI: 10.1103/physreve.83.061131] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/24/2011] [Revised: 05/20/2011] [Indexed: 05/31/2023]
Abstract
The temporal behavior of the mean-square displacement and the velocity autocorrelation function of a particle subjected to a periodic force in a harmonic potential well is investigated for viscoelastic media using the generalized Langevin equation. The interaction with fluctuations of environmental parameters is modeled by a multiplicative white noise, by an internal Mittag-Leffler noise with a finite memory time, and by an additive external noise. It is shown that the presence of a multiplicative noise has a profound effect on the behavior of the autocorrelation functions. Particularly, for correlation functions the model predicts a crossover between two different asymptotic power-law regimes. Moreover, a dependence of the correlation function on the frequency of the external periodic forcing occurs that gives a simple criterion to discern the multiplicative noise in future experiments. It is established that additive external and internal noises cause qualitatively different dependences of the autocorrelation functions on the external forcing and also on the time lag. The influence of the memory time of the internal noise on the dynamics of the system is also discussed.
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Affiliation(s)
- R Mankin
- Institute of Mathematics and Natural Sciences, Tallinn University, Tallinn, Estonia
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Mankin R, Laas K, Laas T, Reiter E. Stochastic multiresonance and correlation-time-controlled stability for a harmonic oscillator with fluctuating frequency. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2008; 78:031120. [PMID: 18851006 DOI: 10.1103/physreve.78.031120] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/06/2008] [Indexed: 05/26/2023]
Abstract
The long-time behavior of the first two moments and the correlation function for the output signal of a harmonic oscillator with fluctuating frequency subjected to an external periodic force and an additive thermal noise is considered analytically. The colored fluctuations of the oscillator frequency are modeled as a three-level Markovian noise. Using the Shapiro-Loginov formula, the exact expressions of several stochastic resonance (SR) characteristics such as the spectral amplification, the variance of the output signal, the signal-to-noise ratio, and the SR gain have been calculated. The nonmonotonic dependence of the SR characteristics versus the noise parameters as well as versus the input signal frequency and also the conditions for the appearance of energetic instability are analyzed. In particular, the multiresonancelike behavior of the variance and the signal-to-noise ratio as functions of the noise correlation time are observed and the connection between the occurrence of energetic instability and the phenomenon of stochastic multiresonance is established. Some unexpected effects such as the hypersensitive response of the spectral amplification to small variations of the noise amplitude encountered in the case of a large flatness of the colored noise are also discussed.
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Affiliation(s)
- Romi Mankin
- Institute of Mathematics and Natural Sciences, Tallinn University, 25 Narva Road, 10120 Tallinn, Estonia
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Mankin R, Soika E, Sauga A, Ainsaar A. Thermally enhanced stability in fluctuating bistable potentials. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2008; 77:051113. [PMID: 18643032 DOI: 10.1103/physreve.77.051113] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/14/2007] [Revised: 03/13/2008] [Indexed: 05/26/2023]
Abstract
Overdamped motion of Brownian particles in an asymmetric double-well potential driven by an additive nonequilibrium three-level noise and a thermal noise is considered. In the stationary regime, an exact formula for the mean occupancy of the metastable state is derived, and the phenomenon of enhancement of stability versus temperature is investigated. It is established that in a certain region of the system parameters the mean occupancy can be either multiply enhanced or suppressed by variations of temperature. We show that this effect is due to the involvement of different time scales in the problem. The necessary conditions for several different behaviors of the mean occupancy as a function of temperature are also discussed. The effect is more pronounced when the kurtosis of the three-level noise tends to -2 , i.e., in the case of dichotomous noise.
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Affiliation(s)
- Romi Mankin
- Department of Natural Sciences, Tallinn University, 25 Narva Road, 10120 Tallinn, Estonia
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Haljas A, Mankin R, Sauga A, Reiter E. Anomalous mobility of Brownian particles in a tilted symmetric sawtooth potential. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2004; 70:041107. [PMID: 15600397 DOI: 10.1103/physreve.70.041107] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/19/2004] [Indexed: 05/24/2023]
Abstract
Overdamped motion of Brownian particles in a 1D periodic system with a simple symmetric sawtooth potential subjected to both unbiased thermal noise and spatially nonhomogeneous three-level colored noise is considered analytically. Upon application of a tilting force the particles exhibit anomalous transport properties, namely, absolute negative mobility, negative differential mobility, and the phenomenon of hypersensitive differential response. It is established that the mobility (differential mobility included) depends nonmonotonically on the parameters (switching rate, amplitude, and temperature) of nonequilibrium and thermal noises. The necessary conditions for various anomalous transport properties are found.
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Affiliation(s)
- Astrid Haljas
- Department of Natural Sciences, Tallinn Pedagogical University, 25 Narva Road, 10120 Tallinn, Estonia
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Heinsalu E, Tammelo R, Ord T. Diffusion and current of Brownian particles in tilted piecewise linear potentials: amplification and coherence. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2004; 69:021111. [PMID: 14995431 DOI: 10.1103/physreve.69.021111] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/02/2003] [Indexed: 05/24/2023]
Abstract
Overdamped motion of Brownian particles in tilted piecewise linear periodic potentials is considered. Explicit algebraic expressions for the diffusion coefficient, current, and coherence level of Brownian transport are derived. Their dependencies on temperature, tilting force, and the shape of the potential are analyzed. The necessary and sufficient conditions for the nonmonotonic behavior of the diffusion coefficient as a function of temperature are determined. The diffusion coefficient and coherence level are found to be extremely sensitive to the asymmetry of the potential. It is established that at the values of the external force, for which the enhancement of diffusion is most rapid, the level of coherence has a wide plateau at low temperatures with the value of the Péclet factor 2. An interpretation of the amplification of diffusion in comparison with free thermal diffusion in terms of probability distribution is proposed.
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Affiliation(s)
- Els Heinsalu
- Institute of Theoretical Physics, Tartu University, 4 Tähe Street, 51010 Tartu, Estonia
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