Dielectric dispersion for short double-strand DNA

Dielectric spectroscopy for monitoring human pancreatic islet differentiation within cell-seeded scaffolds in a perfusion bioreactor system

The long-term in vitro culture and differentiation of human pancreatic islets is still hindered by the inability to emulate a suitable microenvironment mimicking physiological extracellular matrix (ECM) support and nutrient/oxygen perfusion. This is further amplified by the current lack of a non-invasive and rapid monitoring system to readily evaluate cellular processes. In this study, we realized a viable method for non-invasively monitoring isolated human pancreatic islets in vitro. Islets are induced to dedifferentiate into proliferative duct-like structures (DLS) in preparation for potential and subsequent re-differentiation into functional islet-like structures (ILS) in a process reminiscent of islet regeneration strategies. This long-term in vitro process is conducted within a three-dimensional microenvironment involving islets embedded in an optimized ECM gel supported by microfabricated three-dimensional scaffolds. The islet-scaffold is then housed and continuously perfused within chambers of a bioreactor platform. The process in its entirety is monitored through dielectric spectroscopy measurements, yielding an accurate representation of cellular morphology, functionality, and volume fraction. This non-invasive and real-time monitoring tool can be further manipulated to elucidate important information about the optimized cellular microenvironment required for maintaining long-term culture and achieve efficient differentiation for islet regeneration.

Barrier-induced dielectric counterion relaxation at super-low frequencies in salt-free polyelectrolyte solutions

Based on the thermally activated diffusion of counterions over the barrier of the electrostatic binding potential, we construct a scaling theory for the slow dielectric response in dilute and semi-dilute polyelectrolyte solutions. The theory is based on an analytic evaluation of the mean-escape time of a single counterion from the surface of a polyelectrolyte chain and uses a variational expression for the electrostatic potential of a charged cylinder including counterion condensation. This mean-escape time shows a range of characteristic power-law dependencies on the polyelectrolyte length and the polyelectrolyte monomer concentration. The existence of this novel dielectric mode at super-low frequencies reflects the wide spectrum of experimental findings for the super-low-frequency dielectric relaxation mode and thereby helps to reconcile conflicting interpretations of experimental data in terms of conventional scaling laws. We also devise a scaling theory for the counterion condensation of finite-length polyelectrolyte chains at finite concentration, which allows us to include polyelectrolyte charge renormalization in dilute as well as semi-dilute solutions in a unified theoretical framework.

Graphene oxide modified light addressable potentiometric sensor and its application for ssDNA monitoring

A light addressable potentiometric sensor (LAPS) is a kind of silicon based semiconductor sensor, and surface modification is a fundamental problem for its application in biological fields. Graphene oxide (GO) based biochemically activated LAPS were proposed, called GO-LAPS. The GO-LAPS were applied to monitoring single strand DNA (ssDNA) probe immobilization and its hybridization with complementary ssDNA molecules of different chain lengths (30, 21 and 14 base pairs, respectively). It was discovered that the curves of LAPS' currents versus analyte concentrations for ssDNA probe binding and the target ssDNA hybridization were different. Explanations were proposed based on the semiconductor's surface-electric-field-effect and the electrical properties of ssDNA molecule. Moreover, comparisons between GO-LAPS and LAPS without GO modification were carried out. Enhanced response currents of GO-LAPS were reported experimentally and analyzed theoretically based on X-ray photoelectron spectroscopy (XPS) of GO-LAPS. The limitation of target ssDNA monitoring was 1 pM to 10 nM, which suggested that this LAPS based platform could be developed as a sensitive means for short chain ssDNA detection.

Low-frequency collective exchange mode in the dielectric spectrum of salt-free dilute polyelectrolyte solutions

We study the frequency-dependent dielectric response of flexible polyelectrolyte chains in aqueous salt-free dilute solution as a function of polymer concentration and length by means of Brownian dynamics simulations including hydrodynamic interactions. We show that condensed and uncondensed counter ions are characterized by different dielectric response spectra and thus confirm long-held scaling assumptions used for the interpretation of experimental data. In addition to the well-known relaxation modes of condensed and uncondensed counter ions we observe for a single polyelectrolyte chain, we find in many-chain simulations a novel spectral feature at low frequencies that essentially corresponds to an exchange of counter ions between neighboring polyelectrolytes. Our results suggest that the experimental low-frequency dielectric mode might not be due to condensed counter ions, as is commonly assumed, but rather due to a collective many-chain process. This could resolve a long-standing puzzle in the comparison of experimental results and scaling predictions.

Role of hydrodynamic behavior of DNA molecules in dielectrophoretic polarization under the action of an electric field

A continuum model is developed to predict the dielectrophoretic polarizability of coiled DNA molecules under the action of an alternating current electric field. The model approximates the coiled DNA molecule as a charged porous spherical particle. The model explains the discrepancies among scaling laws of polarizability of different-sized DNA molecules with contour length and such discrepancies are attributed to different hydrodynamic behavior. With zero or one fitting parameter, theoretical predictions are in good agreement with various experimental data, even though in experiments there are some uncertainties in regard to certain parameters.

Polarization of nanorods submerged in an electrolyte solution and subjected to an ac electrical field

Recently, there has been growing interest in utilizing electrical fields to position and separate rod-shaped particles such as DNA molecules, actin filaments, microtubules, viruses, bacteria, nanotubes, and nanorods. The polarization of the electrical double layer, enveloping the rod, plays a critical role in determining the magnitude and direction of the rod's dipole moment. We consider noninteracting, rod-shaped (spherocylinder) particles and calculate the induced dipole moment as a function of the electrical field frequency, the rod's aspect ratio (length/radius), the rod's free surface charge, and the double-layer thickness. To this end, we solve the Poisson-Nernst-Planck (PNP) equations for the ions' migration, diffusion, and convection. When the surface charge is small and the rod is short, the dipole moment is negative. As the rod's length increases, the dipole moment increases and eventually changes sign from negative to positive. The dipole coefficient of a rod, whose length is greater than some critical value, increases linearly with length. This latter observation simplifies the estimation of the dipole moment of particles with large aspect ratios (length/radius). The theoretical predictions are compared and favorably agree with experimental data for double-stranded, short DNA molecules.

Dielectric inspection of erythrocyte morphology

We performed a systematic study of the sensitivity of dielectric spectroscopy to erythrocyte morphology. Namely, rabbit erythrocytes of four different shapes were prepared by precisely controlling the pH of the suspending medium, and their complex permittivities over the frequency range from 0.1 to 110 MHz were measured and analyzed. Their quantitative analysis shows that the characteristic frequency and the broadening parameter of the dielectric relaxation of interfacial polarization are highly specific to the erythrocyte shape, while they are insensitive to the cell volume fraction. Therefore, these two dielectric parameters can be used to differentiate erythrocytes of different shapes, if dielectric spectroscopy is applied to flow-cytometric inspection of single blood cells. In addition, we revealed the applicability and limitations of the analytical theory of interfacial polarization to explain the experimental permittivities of non-spherical erythrocytes.

Dielectric dispersion of short single-stranded DNA in aqueous solutions with and without added salt

Dielectric spectroscopy measurements were performed for aqueous solutions of short single-stranded DNA with 30 to 120 bases of thymine over a frequency range of 10;{5} to 10;{8}Hz . Dielectric dispersion was found to include two relaxation processes in the ranges from 10;{5} to 10;{6} and from 10;{6} to 10;{8}Hz , respectively, with the latter mainly discussed in this study. The dielectric increment and the relaxation time of the high-frequency relaxation of DNA in solutions without added salt exhibited concentration and polymer-length dependences eventually identical to those for dilute polyion solutions described in previous studies. For solutions with added salt, on the other hand, those dielectric parameters were independent of salt concentration up to a certain critical value and started to decrease with further increasing salt concentration. This critical behavior is well explained by our newly extended cell model that takes into account the spatial distribution of loosely bound counterions around DNA molecules as a function of salt concentration.