Boundary-induced spatiotemporal complex patterns in excitable systems

Self-sustained biochemical oscillations and waves with a feedback determined only by boundary conditions

We discuss the biochemical three-dimensional reaction-diffusion model, which does not provide temporal self-sustained oscillations via reaction terms. However, the self-sustained oscillations and waves could be obtained using the proper boundary conditions for systems with a finite thickness. We have carried out in our numerical simulation the results quite corresponding to the experimental ones. We discuss the range of models for which our approach is applicable.

Self-sustained collective oscillation generated in an array of nonoscillatory cells

Oscillations are ubiquitous phenomena in biological systems. Conventional models of biological periodic oscillations usually invoke interconnecting transcriptional feedback loops. Some specific proteins function as transcription factors, which in turn negatively regulate the expression of the genes that encode these "clock proteins." These loops may lead to rhythmic changes in gene expression in a cell. In the case of multicellular tissue, collective oscillation is often due to the synchronization of these cells, which manifest themselves as autonomous oscillators. In contrast, we propose here a different scenario for the occurrence of collective oscillation in a group of nonoscillatory cells. Neither periodic external stimulation nor pacemaker cells with intrinsically oscillator are included in the present system. By adopting a spatially inhomogeneous active factor, we observe and analyze a coupling-induced oscillation, inherent to the phenomenon of wave propagation due to intracellular communication.

Boundary-induced patterns in excitable systems: the structure of oscillatory domain

The present work extends our recently published study [Phys. Rev. E 73, 066224 (2006)] on a mechanism of pattern formation in excitable media due to inhomogeneous boundary conditions (BC). To that end, we analyze a pair of coupled excitable and oscillatory cells, a distributed FitzHugh Nagumo model, and a distributed five-variable model that describes CO catalytic oxidation. For the three systems we determine the structure of the oscillatory domains, composed of bands of complex firing solutions with period-adding bifurcations, and show the commonality of the structures. The obtained results account for the recently reported experimental observations of mixed-mode oscillations showing a period-adding bifurcation during CO oxidation on a disk-shaped catalytic cloth with imposed cold temperature BC.