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Powanwe AS, Longtin A. Determinants of Brain Rhythm Burst Statistics. Sci Rep 2019; 9:18335. [PMID: 31797877 PMCID: PMC6892937 DOI: 10.1038/s41598-019-54444-z] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2019] [Accepted: 11/12/2019] [Indexed: 11/16/2022] Open
Abstract
Brain rhythms recorded in vivo, such as gamma oscillations, are notoriously variable both in amplitude and frequency. They are characterized by transient epochs of higher amplitude known as bursts. It has been suggested that, despite their short-life and random occurrence, bursts in gamma and other rhythms can efficiently contribute to working memory or communication tasks. Abnormalities in bursts have also been associated with e.g. motor and psychiatric disorders. It is thus crucial to understand how single cell and connectivity parameters influence burst statistics and the corresponding brain states. To address this problem, we consider a generic stochastic recurrent network of Pyramidal Interneuron Network Gamma (PING) type. Using the stochastic averaging method, we derive dynamics for the phase and envelope of the amplitude process, and find that they depend on only two meta-parameters that combine all the model parameters. This allows us to identify an optimal parameter regime of healthy variability with similar statistics to those seen in vivo; in this regime, oscillations and bursts are supported by synaptic noise. The probability density for the rhythm’s envelope as well as the mean burst duration are then derived using first passage time analysis. Our analysis enables us to link burst attributes, such as duration and frequency content, to system parameters. Our general approach can be extended to different frequency bands, network topologies and extra populations. It provides the much needed insight into the biophysical determinants of rhythm burst statistics, and into what needs to be changed to correct rhythms with pathological statistics.
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Affiliation(s)
- Arthur S Powanwe
- Department of Physics, University of Ottawa, 150 Louis Pasteur, Ottawa, ON, K1N6N5, Canada. .,Centre for Neural Dynamics, University of Ottawa, Ottawa, ON, Canada.
| | - André Longtin
- Department of Physics, University of Ottawa, 150 Louis Pasteur, Ottawa, ON, K1N6N5, Canada. .,Department of Cellular and Molecular Medicine, 451 Smyth Road, Ottawa, ON, K1H8M5, Canada. .,Centre for Neural Dynamics, University of Ottawa, Ottawa, ON, Canada.
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Nichols EJ, Hutt A. Neural field simulator: two-dimensional spatio-temporal dynamics involving finite transmission speed. Front Neuroinform 2015; 9:25. [PMID: 26539105 PMCID: PMC4611063 DOI: 10.3389/fninf.2015.00025] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2015] [Accepted: 10/02/2015] [Indexed: 12/14/2022] Open
Abstract
Neural Field models (NFM) play an important role in the understanding of neural population dynamics on a mesoscopic spatial and temporal scale. Their numerical simulation is an essential element in the analysis of their spatio-temporal dynamics. The simulation tool described in this work considers scalar spatially homogeneous neural fields taking into account a finite axonal transmission speed and synaptic temporal derivatives of first and second order. A text-based interface offers complete control of field parameters and several approaches are used to accelerate simulations. A graphical output utilizes video hardware acceleration to display running output with reduced computational hindrance compared to simulators that are exclusively software-based. Diverse applications of the tool demonstrate breather oscillations, static and dynamic Turing patterns and activity spreading with finite propagation speed. The simulator is open source to allow tailoring of code and this is presented with an extension use case.
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Affiliation(s)
- Eric J. Nichols
- Team Neurosys, Loria, Centre National de la Recherche Scientifique, INRIA, UMR no. 7503, Université de LorraineNancy, France
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Detorakis GI, Chaillet A, Palfi S, Senova S. Closed-loop stimulation of a delayed neural fields model of parkinsonian STN-GPe network: a theoretical and computational study. Front Neurosci 2015; 9:237. [PMID: 26217171 PMCID: PMC4498106 DOI: 10.3389/fnins.2015.00237] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2015] [Accepted: 06/22/2015] [Indexed: 11/13/2022] Open
Abstract
Several disorders are related to pathological brain oscillations. In the case of Parkinson's disease, sustained low-frequency oscillations (especially in the β-band, 13-30 Hz) correlate with motor symptoms. It is still under debate whether these oscillations are the cause of parkinsonian motor symptoms. The development of techniques enabling selective disruption of these β-oscillations could contribute to the understanding of the underlying mechanisms, and could be exploited for treatments. A particularly appealing technique is Deep Brain Stimulation (DBS). With clinical electrical DBS, electrical currents are delivered at high frequency to a region made of potentially heterogeneous neurons (the subthalamic nucleus (STN) in the case of Parkinson's disease). Even more appealing is DBS with optogenetics, which is until now a preclinical method using both gene transfer and deep brain light delivery and enabling neuromodulation at the scale of one given neural network. In this work, we rely on delayed neural fields models of STN and the external Globus Pallidus (GPe) to develop, theoretically validate and test in silico a closed-loop stimulation strategy to disrupt these sustained oscillations with optogenetics. First, we rely on tools from control theory to provide theoretical conditions under which sustained oscillations can be attenuated by a closed-loop stimulation proportional to the measured activity of STN. Second, based on this theoretical framework, we show numerically that the proposed closed-loop stimulation efficiently attenuates sustained oscillations, even in the case when the photosensitization effectively affects only 50% of STN neurons. We also show through simulations that oscillations disruption can be achieved when the same light source is used for the whole STN population. We finally test the robustness of the proposed strategy to possible acquisition and processing delays, as well as parameters uncertainty.
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Affiliation(s)
- Georgios Is. Detorakis
- Laboratoire des Signaux et Systèmes, CentraleSupelecGif-sur-Yvette, France
- Faculté des Sciences, Université Paris SudOrsay, France
| | - Antoine Chaillet
- Laboratoire des Signaux et Systèmes, CentraleSupelecGif-sur-Yvette, France
- Faculté des Sciences, Université Paris SudOrsay, France
| | - Stéphane Palfi
- AP-HP, Hospital H. Mondor, Service de neurochirurgieCréteil, France
- Institut National de la Santé et de la Recherche Médicale, U955, Equipe 14Créteil, France
- Faculty of Medicine, Université Paris EstCréteil, France
| | - Suhan Senova
- AP-HP, Hospital H. Mondor, Service de neurochirurgieCréteil, France
- Institut National de la Santé et de la Recherche Médicale, U955, Equipe 14Créteil, France
- Faculty of Medicine, Université Paris EstCréteil, France
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Lefebvre J, Perkins TJ. Neural population densities shape network correlations. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2012; 85:021914. [PMID: 22463251 DOI: 10.1103/physreve.85.021914] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/26/2011] [Revised: 11/08/2011] [Indexed: 05/31/2023]
Abstract
The way sensory microcircuits manage cellular response correlations is a crucial question in understanding how such systems integrate external stimuli and encode information. Most sensory systems exhibit heterogeneities in terms of population sizes and features, which all impact their dynamics. This work addresses how correlations between the dynamics of neural ensembles depend on the relative size or density of excitatory and inhibitory populations. To do so, we study an apparently symmetric system of coupled stochastic differential equations that model the evolution of the populations' activities. Excitatory and inhibitory populations are connected by reciprocal recurrent connections, and both receive different stimuli exhibiting a certain level of correlation with each other. A stability analysis is performed, which reveals an intrinsic asymmetry in the distribution of the fixed points with respect to the threshold of the nonlinearities. Based on this, we show how the cross correlation between the population responses depends on the density of the inhibitory population, and that a specific ratio between both population sizes leads to a state of zero correlation. We show that this so-called asynchronous state subsists, despite the presence of stimulus correlation, and most importantly, that it occurs only in asymmetrical systems where one population outnumbers the other. Using linear approximations, we derive analytical expressions for the root of the cross-correlation function and study how the asynchronous state is impacted by the model's parameters. This work suggests a possible explanation for why inhibitory cells outnumber excitatory cells in the visual system.
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Affiliation(s)
- Jérémie Lefebvre
- Ottawa Hospital Research Institute, 501 Smyth Road, Ottawa, Ontario K1H 8L6, Canada.
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Hutt A. External stimulation induces switches between neural oscillations: an illustrative feedback model. BMC Neurosci 2011. [PMCID: PMC3240252 DOI: 10.1186/1471-2202-12-s1-p156] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022] Open
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Pernice V, Staude B, Cardanobile S, Rotter S. How structure determines correlations in neuronal networks. PLoS Comput Biol 2011; 7:e1002059. [PMID: 21625580 PMCID: PMC3098224 DOI: 10.1371/journal.pcbi.1002059] [Citation(s) in RCA: 145] [Impact Index Per Article: 11.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2010] [Accepted: 04/01/2011] [Indexed: 11/19/2022] Open
Abstract
Networks are becoming a ubiquitous metaphor for the understanding of complex biological systems, spanning the range between molecular signalling pathways, neural networks in the brain, and interacting species in a food web. In many models, we face an intricate interplay between the topology of the network and the dynamics of the system, which is generally very hard to disentangle. A dynamical feature that has been subject of intense research in various fields are correlations between the noisy activity of nodes in a network. We consider a class of systems, where discrete signals are sent along the links of the network. Such systems are of particular relevance in neuroscience, because they provide models for networks of neurons that use action potentials for communication. We study correlations in dynamic networks with arbitrary topology, assuming linear pulse coupling. With our novel approach, we are able to understand in detail how specific structural motifs affect pairwise correlations. Based on a power series decomposition of the covariance matrix, we describe the conditions under which very indirect interactions will have a pronounced effect on correlations and population dynamics. In random networks, we find that indirect interactions may lead to a broad distribution of activation levels with low average but highly variable correlations. This phenomenon is even more pronounced in networks with distance dependent connectivity. In contrast, networks with highly connected hubs or patchy connections often exhibit strong average correlations. Our results are particularly relevant in view of new experimental techniques that enable the parallel recording of spiking activity from a large number of neurons, an appropriate interpretation of which is hampered by the currently limited understanding of structure-dynamics relations in complex networks.
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Hutt A, Longtin A. Effects of the anesthetic agent propofol on neural populations. Cogn Neurodyn 2010; 4:37-59. [PMID: 19768579 PMCID: PMC2837528 DOI: 10.1007/s11571-009-9092-2] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2009] [Revised: 08/29/2009] [Accepted: 08/31/2009] [Indexed: 11/30/2022] Open
Abstract
The neuronal mechanisms of general anesthesia are still poorly understood. Besides several characteristic features of anesthesia observed in experiments, a prominent effect is the bi-phasic change of power in the observed electroencephalogram (EEG), i.e. the initial increase and subsequent decrease of the EEG-power in several frequency bands while increasing the concentration of the anaesthetic agent. The present work aims to derive analytical conditions for this bi-phasic spectral behavior by the study of a neural population model. This model describes mathematically the effective membrane potential and involves excitatory and inhibitory synapses, excitatory and inhibitory cells, nonlocal spatial interactions and a finite axonal conduction speed. The work derives conditions for synaptic time constants based on experimental results and gives conditions on the resting state stability. Further the power spectrum of Local Field Potentials and EEG generated by the neural activity is derived analytically and allow for the detailed study of bi-spectral power changes. We find bi-phasic power changes both in monostable and bistable system regime, affirming the omnipresence of bi-spectral power changes in anesthesia. Further the work gives conditions for the strong increase of power in the δ-frequency band for large propofol concentrations as observed in experiments.
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Affiliation(s)
- Axel Hutt
- INRIA CR Nancy - Grand Est, CS20101, 54603 Villers-ls-Nancy Cedex, France
| | - Andre Longtin
- Department of Physics, University of Ottawa, 150 Louis Pasteur, Ottawa, ON K1N-6N5 Canada
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