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Wu F, Lin J, Wang L, Lin S. Polymer Vesicles in a Nanochannel under Flow Fields: A DPD Simulation Study. MACROMOL THEOR SIMUL 2022. [DOI: 10.1002/mats.202200027] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Fangsheng Wu
- Shanghai Key Laboratory of Advanced Polymeric Materials Key Laboratory for Ultrafine Materials of Ministry of Education Frontiers Science Center for Materiobiology and Dynamic Chemistry School of Materials Science and Engineering East China University of Science and Technology Shanghai 200237 China
| | - Jiaping Lin
- Shanghai Key Laboratory of Advanced Polymeric Materials Key Laboratory for Ultrafine Materials of Ministry of Education Frontiers Science Center for Materiobiology and Dynamic Chemistry School of Materials Science and Engineering East China University of Science and Technology Shanghai 200237 China
| | - Liquan Wang
- Shanghai Key Laboratory of Advanced Polymeric Materials Key Laboratory for Ultrafine Materials of Ministry of Education Frontiers Science Center for Materiobiology and Dynamic Chemistry School of Materials Science and Engineering East China University of Science and Technology Shanghai 200237 China
| | - Shaoliang Lin
- Shanghai Key Laboratory of Advanced Polymeric Materials Key Laboratory for Ultrafine Materials of Ministry of Education Frontiers Science Center for Materiobiology and Dynamic Chemistry School of Materials Science and Engineering East China University of Science and Technology Shanghai 200237 China
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Tchoufag J, Sahu A, Mandadapu KK. Absolute vs Convective Instabilities and Front Propagation in Lipid Membrane Tubes. PHYSICAL REVIEW LETTERS 2022; 128:068101. [PMID: 35213207 DOI: 10.1103/physrevlett.128.068101] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/10/2020] [Revised: 09/01/2021] [Accepted: 12/24/2021] [Indexed: 06/14/2023]
Abstract
We analyze the stability of biological membrane tubes, with and without a base flow of lipids. Membrane dynamics are completely specified by two dimensionless numbers: the well-known Föppl-von Kármán number Γ and the recently introduced Scriven-Love number SL, respectively quantifying the base tension and base flow speed. For unstable tubes, the growth rate of a local perturbation depends only on Γ, whereas SL governs the absolute versus convective nature of the instability. Furthermore, nonlinear simulations of unstable tubes reveal an initially localized disturbance result in propagating fronts, which leave a thin atrophied tube in their wake. Depending on the value of Γ, the thin tube is connected to the unperturbed regions via oscillatory or monotonic shape transitions-reminiscent of recent experimental observations on the retraction and atrophy of axons. We elucidate our findings through a weakly nonlinear analysis, which shows membrane dynamics may be approximated by a model of the class of extended Fisher-Kolmogorov equations. Our study sheds light on the pattern selection mechanism in axonal shapes by recognizing the existence of two Lifshitz points, at which the front dynamics undergo steady-to-oscillatory bifurcations.
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Affiliation(s)
- Joël Tchoufag
- Department of Chemical and Biomolecular Engineering, University of California, Berkeley, California 94720, USA
| | - Amaresh Sahu
- Department of Chemical and Biomolecular Engineering, University of California, Berkeley, California 94720, USA
| | - Kranthi K Mandadapu
- Department of Chemical and Biomolecular Engineering, University of California, Berkeley, California 94720, USA
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA
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Kumar D, Schroeder CM. Nonlinear Transient and Steady State Stretching of Deflated Vesicles in Flow. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2021; 37:13976-13984. [PMID: 34813335 DOI: 10.1021/acs.langmuir.1c01275] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Membrane-bound vesicles and organelles exhibit a wide array of nonspherical shapes at equilibrium, including biconcave and tubular morphologies. Despite recent progress, the stretching dynamics of deflated vesicles is not fully understood, particularly far from equilibrium where complex nonspherical shapes undergo large deformations in flow. Here, we directly observe the transient and steady-state nonlinear stretching dynamics of deflated vesicles in extensional flow using a Stokes trap. Automated flow control is used to observe vesicle dynamics over a wide range of flow rates, shape anisotropy, and viscosity contrast. Our results show that deflated vesicle membranes stretch into highly deformed shapes in flow above a critical capillary number Cac1. We further identify a second critical capillary number Cac2, above which vesicle stretch diverges in flow. Vesicles are robust to multiple nonlinear stretch-relax cycles, evidenced by relaxation of dumbbell-shaped vesicles containing thin lipid tethers following flow cessation. An analytical model is developed for vesicle deformation in flow, which enables comparison of nonlinear steady-state stretching results with theories for different reduced volumes. Our results show that the model captures the steady-state stretching of moderately deflated vesicles; however, it underpredicts the steady-state nonlinear stretching of highly deflated vesicles. Overall, these results provide a new understanding of the nonlinear stretching dynamics and membrane mechanics of deflated vesicles in flow.
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Affiliation(s)
- Dinesh Kumar
- Department of Chemical and Biomolecular Engineering, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, United States
- Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, United States
| | - Charles M Schroeder
- Department of Chemical and Biomolecular Engineering, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, United States
- Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, United States
- Department of Materials Science and Engineering, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, United States
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Guckenberger A, Gekle S. Theory and algorithms to compute Helfrich bending forces: a review. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2017; 29:203001. [PMID: 28240220 DOI: 10.1088/1361-648x/aa6313] [Citation(s) in RCA: 37] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
Cell membranes are vital to shield a cell's interior from the environment. At the same time they determine to a large extent the cell's mechanical resistance to external forces. In recent years there has been considerable interest in the accurate computational modeling of such membranes, driven mainly by the amazing variety of shapes that red blood cells and model systems such as vesicles can assume in external flows. Given that the typical height of a membrane is only a few nanometers while the surface of the cell extends over many micrometers, physical modeling approaches mostly consider the interface as a two-dimensional elastic continuum. Here we review recent modeling efforts focusing on one of the computationally most intricate components, namely the membrane's bending resistance. We start with a short background on the most widely used bending model due to Helfrich. While the Helfrich bending energy by itself is an extremely simple model equation, the computation of the resulting forces is far from trivial. At the heart of these difficulties lies the fact that the forces involve second order derivatives of the local surface curvature which by itself is the second derivative of the membrane geometry. We systematically derive and compare the different routes to obtain bending forces from the Helfrich energy, namely the variational approach and the thin-shell theory. While both routes lead to mathematically identical expressions, so-called linear bending models are shown to reproduce only the leading order term while higher orders differ. The main part of the review contains a description of various computational strategies which we classify into three categories: the force, the strong and the weak formulation. We finally give some examples for the application of these strategies in actual simulations.
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Affiliation(s)
- Achim Guckenberger
- Biofluid Simulation and Modeling, Fachbereich Physik, Universität Bayreuth, Germany
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Dahl JB, Narsimhan V, Gouveia B, Kumar S, Shaqfeh ESG, Muller SJ. Experimental observation of the asymmetric instability of intermediate-reduced-volume vesicles in extensional flow. SOFT MATTER 2016; 12:3787-96. [PMID: 26984509 PMCID: PMC4838492 DOI: 10.1039/c5sm03004h] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Vesicles provide an attractive model system to understand the deformation of living cells in response to mechanical forces. These simple, enclosed lipid bilayer membranes are suitable for complementary theoretical, numerical, and experimental analysis. A recent study [Narsimhan, Spann, Shaqfeh, J. Fluid Mech., 2014, 750, 144] predicted that intermediate-aspect-ratio vesicles extend asymmetrically in extensional flow. Upon infinitesimal perturbation to the vesicle shape, the vesicle stretches into an asymmetric dumbbell with a cylindrical thread separating the two ends. While the symmetric stretching of high-aspect-ratio vesicles in extensional flow has been observed and characterized [Kantsler, Segre, Steinberg, Phys. Rev. Lett., 2008, 101, 048101] as well as recapitulated in numerical simulations by Narsimhan et al., experimental observation of the asymmetric stretching has not been reported. In this work, we present results from microfluidic cross-slot experiments observing this instability, along with careful characterization of the flow field, vesicle shape, and vesicle bending modulus. The onset of this shape transition depends on two non-dimensional parameters: reduced volume (a measure of vesicle asphericity) and capillary number (ratio of viscous to bending forces). We observed that every intermediate-reduced-volume vesicle that extends forms a dumbbell shape that is indeed asymmetric. For the subset of the intermediate-reduced-volume regime we could capture experimentally, we present an experimental phase diagram for asymmetric vesicle stretching that is consistent with the predictions of Narsimhan et al.
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Affiliation(s)
- Joanna B Dahl
- Department of Chemical and Biomolecular Engineering, University of California, Berkeley, Berkeley, CA 94720-1460, USA.
| | - Vivek Narsimhan
- Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
| | - Bernardo Gouveia
- Department of Chemical and Biomolecular Engineering, University of California, Berkeley, Berkeley, CA 94720-1460, USA.
| | - Sanjay Kumar
- Department of Chemical and Biomolecular Engineering, University of California, Berkeley, Berkeley, CA 94720-1460, USA. and Department of Bioengineering, University of California, Berkeley, Berkeley, CA 94720-1762, USA
| | - Eric S G Shaqfeh
- Department of Chemical Engineering, Department of Mechanical Engineering, Stanford University, Stanford, CA 94305, USA and Institute of Computational and Mathematical Engineering, Stanford University, Stanford, CA 94305, USA
| | - Susan J Muller
- Department of Chemical and Biomolecular Engineering, University of California, Berkeley, Berkeley, CA 94720-1460, USA.
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Boltz HH, Kierfeld J. Shapes of sedimenting soft elastic capsules in a viscous fluid. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2015; 92:033003. [PMID: 26465552 DOI: 10.1103/physreve.92.033003] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/04/2015] [Indexed: 06/05/2023]
Abstract
Soft elastic capsules which are driven through a viscous fluid undergo shape deformation coupled to their motion. We introduce an iterative solution scheme which couples hydrodynamic boundary integral methods and elastic shape equations to find the stationary axisymmetric shape and the velocity of an elastic capsule moving in a viscous fluid at low Reynolds numbers. We use this approach to systematically study dynamical shape transitions of capsules with Hookean stretching and bending energies and spherical rest shape sedimenting under the influence of gravity or centrifugal forces. We find three types of possible axisymmetric stationary shapes for sedimenting capsules with fixed volume: a pseudospherical state, a pear-shaped state, and buckled shapes. Capsule shapes are controlled by two dimensionless parameters, the Föppl-von-Kármán number characterizing the elastic properties and a Bond number characterizing the driving force. For increasing gravitational force the spherical shape transforms into a pear shape. For very large bending rigidity (very small Föppl-von-Kármán number) this transition is discontinuous with shape hysteresis. The corresponding transition line terminates, however, in a critical point, such that the discontinuous transition is not present at typical Föppl-von-Kármán numbers of synthetic capsules. In an additional bifurcation, buckled shapes occur upon increasing the gravitational force. This type of instability should be observable for generic synthetic capsules. All shape bifurcations can be resolved in the force-velocity relation of sedimenting capsules, where up to three capsule shapes with different velocities can occur for the same driving force. All three types of possible axisymmetric stationary shapes are stable with respect to rotation during sedimentation. Additionally, we study capsules pushed or pulled by a point force, where we always find capsule shapes to transform smoothly without bifurcations.
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Affiliation(s)
| | - Jan Kierfeld
- Physics Department, TU Dortmund University, 44221 Dortmund, Germany
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Abreu D, Levant M, Steinberg V, Seifert U. Fluid vesicles in flow. Adv Colloid Interface Sci 2014; 208:129-41. [PMID: 24630339 DOI: 10.1016/j.cis.2014.02.004] [Citation(s) in RCA: 42] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2013] [Revised: 02/05/2014] [Accepted: 02/05/2014] [Indexed: 12/20/2022]
Abstract
We review the dynamical behavior of giant fluid vesicles in various types of external hydrodynamic flow. The interplay between stresses arising from membrane elasticity, hydrodynamic flows, and the ever present thermal fluctuations leads to a rich phenomenology. In linear flows with both rotational and elongational components, the properties of the tank-treading and tumbling motions are now well described by theoretical and numerical models. At the transition between these two regimes, strong shape deformations and amplification of thermal fluctuations generate a new regime called trembling. In this regime, the vesicle orientation oscillates quasi-periodically around the flow direction while asymmetric deformations occur. For strong enough flows, small-wavelength deformations like wrinkles are observed, similar to what happens in a suddenly reversed elongational flow. In steady elongational flow, vesicles with large excess areas deform into dumbbells at large flow rates and pearling occurs for even stronger flows. In capillary flows with parabolic flow profile, single vesicles migrate towards the center of the channel, where they adopt symmetric shapes, for two reasons. First, walls exert a hydrodynamic lift force which pushes them away. Second, shear stresses are minimal at the tip of the flow. However, symmetry is broken for vesicles with large excess areas, which flow off-center and deform asymmetrically. In suspensions, hydrodynamic interactions between vesicles add up to these two effects, making it challenging to deduce rheological properties from the dynamics of individual vesicles. Further investigations of vesicles and similar objects and their suspensions in steady or time-dependent flow will shed light on phenomena such as blood flow.
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