Donor-acceptor electron transport mediated by solitons

Influence of donor or acceptor presence on excitation states in molecular chains: Nonadiabatic polaron approach

In this paper, we considered a molecular structure that consists of a molecular chain and an additional molecule (donor or acceptor) that can inject (or remove) single excitation (vibron, electron, etc.) onto the molecular chain. We assumed that the excitation forms a self-trapped state due to the interaction with mechanical oscillations of the chain structure elements. We analyzed the energy spectra of the excitation and showed that its state (when it migrates to the molecular chain) has the properties of the nonadiabatic polaron state. The conditions under which the excitation can migrate from one subsystem to another one were considered. It was shown that the presence of a "donor" molecule cannot significantly change the properties of the excitation located on the molecular chain. At the same time, the molecular chain can affect the position of the energy level of the excitation localized on the donor subsystem. Indirectly, this can influence the process of excitation migration from one subsystem to another one. The influence of the basic energy parameters of the system and the environment temperature on this process are discussed. The entire system was assumed to be in thermal equilibrium with the environment.

Long-range donor-acceptor electron transport mediated by α helices

We study the long-range electron and energy transfer mediated by a polaron on an α-helix polypeptide chain coupled to donor and acceptor molecules at opposite ends of the chain. We show that for specific parameters of the system, an electron initially located on the donor can tunnel onto the α helix, forming a polaron, which then travels to the other extremity of the polypeptide chain, where it is captured by the acceptor. We consider three families of couplings between the donor, the acceptor, and the chain and show that one of them can lead to a 90% efficiency of the electron transport from donor to acceptor. We also show that this process remains stable at physiological temperatures in the presence of thermal fluctuations in the system.