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For: Graf IR, Frey E. Generic Transport Mechanisms for Molecular Traffic in Cellular Protrusions. Phys Rev Lett 2017;118:128101. [PMID: 28388182 DOI: 10.1103/physrevlett.118.128101] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/11/2016] [Indexed: 06/07/2023]
Number Cited by Other Article(s)
1
Ngoc NPN, Belitsky V, Schütz GM. An exactly solvable model for RNA polymerase during the elongation stage. Phys Biol 2024;22:016001. [PMID: 39433271 DOI: 10.1088/1478-3975/ad899e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2024] [Accepted: 10/21/2024] [Indexed: 10/23/2024]
2
Pal S, Roy P, Basu A. Availability, storage capacity, and diffusion: Stationary states of an asymmetric exclusion process connected to two reservoirs. Phys Rev E 2024;110:054104. [PMID: 39690651 DOI: 10.1103/physreve.110.054104] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2023] [Accepted: 07/02/2024] [Indexed: 12/19/2024]
3
Goswami A, Dey U, Mukherjee S. Nonequilibrium steady states in coupled asymmetric and symmetric exclusion processes. Phys Rev E 2023;108:054122. [PMID: 38115439 DOI: 10.1103/physreve.108.054122] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2023] [Accepted: 10/09/2023] [Indexed: 12/21/2023]
4
A closed-loop multi-scale model for intrinsic frequency-dependent regulation of axonal growth. Math Biosci 2021;344:108768. [PMID: 34952037 DOI: 10.1016/j.mbs.2021.108768] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2021] [Revised: 12/10/2021] [Accepted: 12/15/2021] [Indexed: 11/22/2022]
5
Dauloudet O, Neri I, Walter JC, Dorignac J, Geniet F, Parmeggiani A. Modelling the effect of ribosome mobility on the rate of protein synthesis. THE EUROPEAN PHYSICAL JOURNAL. E, SOFT MATTER 2021;44:19. [PMID: 33686567 PMCID: PMC7940305 DOI: 10.1140/epje/s10189-021-00019-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/30/2020] [Accepted: 01/15/2021] [Indexed: 06/12/2023]
6
Molecular motor traffic with a slow binding site. J Theor Biol 2021;518:110644. [PMID: 33636200 DOI: 10.1016/j.jtbi.2021.110644] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2020] [Revised: 01/06/2021] [Accepted: 02/18/2021] [Indexed: 11/24/2022]
7
Mishra B, Chowdhury D. Biologically motivated three-species exclusion model: Effects of leaky scanning and overlapping genes on initiation of protein synthesis. Phys Rev E 2019;100:022106. [PMID: 31574638 DOI: 10.1103/physreve.100.022106] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2019] [Indexed: 11/07/2022]
8
Halatek J, Brauns F, Frey E. Self-organization principles of intracellular pattern formation. Philos Trans R Soc Lond B Biol Sci 2019;373:rstb.2017.0107. [PMID: 29632261 PMCID: PMC5904295 DOI: 10.1098/rstb.2017.0107] [Citation(s) in RCA: 86] [Impact Index Per Article: 17.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 02/09/2018] [Indexed: 11/13/2022]  Open
9
Wilson DB, Baker RE, Woodhouse FG. Topology-dependent density optima for efficient simultaneous network exploration. Phys Rev E 2018;97:062301. [PMID: 30011429 DOI: 10.1103/physreve.97.062301] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2017] [Indexed: 11/07/2022]
10
Wilson DB, Byrne H, Bruna M. Reactions, diffusion, and volume exclusion in a conserved system of interacting particles. Phys Rev E 2018;97:062137. [PMID: 30011580 DOI: 10.1103/physreve.97.062137] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2018] [Indexed: 11/07/2022]
11
Bojer M, Graf IR, Frey E. Self-organized system-size oscillation of a stochastic lattice-gas model. Phys Rev E 2018;98:012410. [PMID: 30110755 DOI: 10.1103/physreve.98.012410] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2018] [Indexed: 11/07/2022]
12
Rank M, Mitra A, Reese L, Diez S, Frey E. Limited Resources Induce Bistability in Microtubule Length Regulation. PHYSICAL REVIEW LETTERS 2018;120:148101. [PMID: 29694156 DOI: 10.1103/physrevlett.120.148101] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/17/2017] [Revised: 01/29/2018] [Indexed: 06/08/2023]
13
Patra S, Chowdhury D. Multispecies exclusion process with fusion and fission of rods: A model inspired by intraflagellar transport. Phys Rev E 2018;97:012138. [PMID: 29448410 DOI: 10.1103/physreve.97.012138] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2017] [Indexed: 11/07/2022]
14
Mishra B, Chowdhury D. Interference of two codirectional exclusion processes in the presence of a static bottleneck: A biologically motivated model. Phys Rev E 2017;95:062117. [PMID: 28709297 DOI: 10.1103/physreve.95.062117] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2017] [Indexed: 12/15/2022]
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