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Sidler D, Hamm P. A Feynman diagram description of the 2D-Raman-THz response of amorphous ice. J Chem Phys 2020; 153:044502. [PMID: 32752676 DOI: 10.1063/5.0018485] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The 2D-Raman-THz response in all possible time-orderings (Raman-THz-THz, THz-Raman-THz, and THz-THz-Raman) of amorphous water ice is calculated in two ways: from atomistic molecular dynamics simulations and with the help of a Feynman diagram model, the latter of which power-expands the potential energy surface and the dipole and polarizability surfaces up to leading order. Comparing both results allows one to dissect the 2D-Raman-THz response into contributions from mechanical anharmonicity, as well as electrical dipole and polarizability anharmonicities. Mechanical anharmonicity dominates the 2D-Raman-THz response of the hydrogen-bond stretching and hydrogen-bond bending bands of water, and dipole anharmonicity dominates that of the librational band, while the contribution of polarizability anharmonicity is comparably weak. A distinct echo of the hydrogen-bond stretching band is observed for the THz-Raman-THz pulse sequence, again dominated by mechanical anharmonicity. A peculiar mechanism is discussed, which is based on the coupling between the many normal modes within the hydrogen-bond stretching band and which will inevitably generate such an echo for an amorphous structure.
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Affiliation(s)
- David Sidler
- Department of Chemistry, University of Zurich, Winterthurerstrasse 190, CH-8057 Zürich, Switzerland
| | - Peter Hamm
- Department of Chemistry, University of Zurich, Winterthurerstrasse 190, CH-8057 Zürich, Switzerland
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2
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Tong Z, Videla PE, Jung KA, Batista VS, Sun X. Two-dimensional Raman spectroscopy of Lennard-Jones liquids via ring-polymer molecular dynamics. J Chem Phys 2020; 153:034117. [PMID: 32716164 DOI: 10.1063/5.0015436] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The simulation of multidimensional vibrational spectroscopy of condensed-phase systems including nuclear quantum effects is challenging since full quantum-mechanical calculations are still intractable for large systems comprising many degrees of freedom. Here, we apply the recently developed double Kubo transform (DKT) methodology in combination with ring-polymer molecular dynamics (RPMD) for evaluating multi-time correlation functions [K. A. Jung et al., J. Chem. Phys. 148, 244105 (2018)], providing a practical method for incorporating nuclear quantum effects in nonlinear spectroscopy of condensed-phase systems. We showcase the DKT approach in the simulation of the fifth-order two-dimensional (2D) Raman spectroscopy of Lennard-Jones liquids as a prototypical example, which involves nontrivial nonlinear spectroscopic observables of systems described by anharmonic potentials. Our results show that the DKT can faithfully reproduce the 2D Raman response of liquid xenon at high temperatures, where the system behaves classically. In contrast, liquid neon at low temperatures exhibits moderate but discernible nuclear quantum effects in the 2D Raman response compared to the responses obtained with classical molecular dynamics approaches. Thus, the DKT formalism in combination with RPMD simulations enables simulations of multidimensional optical spectroscopy of condensed-phase systems that partially account for nuclear quantum effects.
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Affiliation(s)
- Zhengqing Tong
- Division of Arts and Sciences, NYU Shanghai, 1555 Century Avenue, Shanghai 200122, China
| | - Pablo E Videla
- Department of Chemistry, Yale University, P.O. Box 208107, New Haven, Connecticut 06520-8107, USA
| | - Kenneth A Jung
- Department of Chemistry, Yale University, P.O. Box 208107, New Haven, Connecticut 06520-8107, USA
| | - Victor S Batista
- Department of Chemistry, Yale University, P.O. Box 208107, New Haven, Connecticut 06520-8107, USA
| | - Xiang Sun
- Division of Arts and Sciences, NYU Shanghai, 1555 Century Avenue, Shanghai 200122, China
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3
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Affiliation(s)
- Peter Hamm
- Department of Chemistry, University of Zurich, Winterthurerstr. 190, CH-8057 Zürich, Switzerland
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4
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Jansen TLC, Saito S, Jeon J, Cho M. Theory of coherent two-dimensional vibrational spectroscopy. J Chem Phys 2019; 150:100901. [DOI: 10.1063/1.5083966] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Thomas la Cour Jansen
- University of Groningen, Zernike Institute for Advanced Materials, Nijenborgh 4, 9747 AG Groningen, The Netherlands
| | - Shinji Saito
- Institute for Molecular Science, Myodaiji, Okazaki, Aichi 444-8585, Japan and The Graduate University for Advanced Studies, Myodaiji, Okazaki, Aichi 444-8585, Japan
| | - Jonggu Jeon
- Center for Molecular Spectroscopy and Dynamics, Institute for Basic Science (IBS), Seoul 02841, South Korea
| | - Minhaeng Cho
- Center for Molecular Spectroscopy and Dynamics, Institute for Basic Science (IBS), Seoul 02841, South Korea
- Department of Chemistry, Korea University, Seoul 02841, South Korea
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5
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Imoto S, Marx D. Pressure response of the THz spectrum of bulk liquid water revealed by intermolecular instantaneous normal mode analysis. J Chem Phys 2019; 150:084502. [PMID: 30823759 DOI: 10.1063/1.5080381] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The radial distribution functions of liquid water are known to change significantly their shape upon hydrostatic compression from ambient conditions deep into the kbar pressure regime. It has been shown that despite their eye-catching changes, the fundamental locally tetrahedral fourfold H-bonding pattern that characterizes ambient water is preserved up to about 10 kbar (1 GPa), which is the stability limit of liquid water at 300 K. The observed increase in coordination number comes from pushing water molecules into the first coordination sphere without establishing an H-bond, resulting in roughly two such additional interstitial molecules at 10 kbar. THz spectroscopy has been firmly established as a powerful experimental technique to analyze H-bonding in aqueous solutions given that it directly probes the far-infrared lineshape and thus the prominent H-bond network mode around 180 cm-1. We, therefore, set out to assess pressure effects on the THz response of liquid water at 10 kbar in comparison to the 1 bar (0.1 MPa) reference, both at 300 K, with the aim to trace back the related lineshape changes to the structural level. To this end, we employ the instantaneous normal mode approximation to rigorously separate the H-bonding peak from the large background arising from the pronounced librational tail. By exactly decomposing the total molecular dynamics into hindered translations, hindered rotations, and intramolecular vibrations, we find that the H-bonding peak arises from translation-translation and translation-rotation correlations, which are successively decomposed down to the level of distinct local H-bond environments. Our utmost detailed analysis based on molecular pair classifications unveils that H-bonded double-donor water pairs contribute most to the THz response around 180 cm-1, whereas interstitial waters are negligible. Moreover, short double-donor H-bonds have their peak maximum significantly shifted toward higher frequencies with respect to such long H-bonds. In conjunction with an increasing relative population of these short H-bonds versus the long ones (while the population of other water pair classes is essentially pressure insensitive), this explains not only the blue-shift of the H-bonding peak by about 20-30 cm-1 in total from 1 bar to 10 kbar but also the filling of the shallow local minimum of the THz lineshape located in between the network peak and the red-wing of the librational band at 1 bar. Based on the changing populations as a function of pressure, we are also able to roughly estimate the pressure-dependence of the H-bond network mode and find that its pressure response and thus the blue-shifting are most pronounced at low kbar pressures.
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Affiliation(s)
- Sho Imoto
- Lehrstuhl für Theoretische Chemie, Ruhr-Universität Bochum, 44780 Bochum, Germany
| | - Dominik Marx
- Lehrstuhl für Theoretische Chemie, Ruhr-Universität Bochum, 44780 Bochum, Germany
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6
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Sidler D, Hamm P. Feynman diagram description of 2D-Raman-THz spectroscopy applied to water. J Chem Phys 2019; 150:044202. [DOI: 10.1063/1.5079497] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023] Open
Affiliation(s)
- David Sidler
- Department of Chemistry, University of Zurich, Zurich, Switzerland
| | - Peter Hamm
- Department of Chemistry, University of Zurich, Zurich, Switzerland
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7
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Jung KA, Videla PE, Batista VS. Inclusion of nuclear quantum effects for simulations of nonlinear spectroscopy. J Chem Phys 2018; 148:244105. [PMID: 29960352 DOI: 10.1063/1.5036768] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The computation and interpretation of nonlinear vibrational spectroscopy is of vital importance for understanding a wide range of dynamical processes in molecular systems. Here, we introduce an approach to evaluate multi-time response functions in terms of multi-time double symmetrized Kubo transformed thermal correlation functions. Furthermore, we introduce a multi-time extension of ring polymer molecular dynamics to evaluate these Kubo transforms. Benchmark calculations show that the approximations are useful for short times even for nonlinear operators, providing a consistent improvement over classical simulations of multi-time correlation functions. The introduced methodology thus provides a practical way of including nuclear quantum effects in multi-time response functions of non-linear optical spectroscopy.
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Affiliation(s)
- Kenneth A Jung
- Department of Chemistry, Yale University, P.O. Box 208107, New Haven, Connecticut 06520-8107, USA
| | - Pablo E Videla
- Department of Chemistry, Yale University, P.O. Box 208107, New Haven, Connecticut 06520-8107, USA
| | - Victor S Batista
- Department of Chemistry, Yale University, P.O. Box 208107, New Haven, Connecticut 06520-8107, USA
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8
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Reppert M, Brumer P. Classical coherent two-dimensional vibrational spectroscopy. J Chem Phys 2018; 148:064101. [DOI: 10.1063/1.5017985] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Mike Reppert
- Chemical Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
| | - Paul Brumer
- Chemical Physics Theory Group, Department of Chemistry, and Center for Quantum Information and Quantum Control, University of Toronto, Toronto, Ontario M5S 3H6, Canada
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10
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Ito H, Tanimura Y. Simulating two-dimensional infrared-Raman and Raman spectroscopies for intermolecular and intramolecular modes of liquid water. J Chem Phys 2016; 144:074201. [DOI: 10.1063/1.4941842] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023] Open
Affiliation(s)
- Hironobu Ito
- Department of Chemistry, Graduate School of Science, Kyoto University, Sakyoku, Kyoto 606-8502, Japan
| | - Yoshitaka Tanimura
- Department of Chemistry, Graduate School of Science, Kyoto University, Sakyoku, Kyoto 606-8502, Japan
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11
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Ito H, Jo JY, Tanimura Y. Notes on simulating two-dimensional Raman and terahertz-Raman signals with a full molecular dynamics simulation approach. STRUCTURAL DYNAMICS (MELVILLE, N.Y.) 2015; 2:054102. [PMID: 26798823 PMCID: PMC4711663 DOI: 10.1063/1.4932597] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/29/2015] [Accepted: 09/25/2015] [Indexed: 06/05/2023]
Abstract
Recent developments in two-dimensional (2D) THz-Raman and 2D Raman spectroscopies have created the possibility for quantitatively investigating the role of many dynamic and structural aspects of the molecular system. We explain the significant points for properly simulating 2D vibrational spectroscopic studies of intermolecular modes using the full molecular dynamics approach, in particular, regarding the system size, the treatment of the thermostat, and inclusion of an Ewald summation for the induced polarizability. Moreover, using the simulation results for water employing various polarization functions, we elucidate the roles of permanent and induced optical properties in determining the 2D profiles of the signal.
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Affiliation(s)
- Hironobu Ito
- Department of Chemistry, Graduate School of Science, Kyoto University , Sakyoku, Kyoto 606-8502, Japan
| | - Ju-Yeon Jo
- Department of Chemistry, Graduate School of Science, Kyoto University , Sakyoku, Kyoto 606-8502, Japan
| | - Yoshitaka Tanimura
- Department of Chemistry, Graduate School of Science, Kyoto University , Sakyoku, Kyoto 606-8502, Japan
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12
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Ikeda T, Ito H, Tanimura Y. Analysis of 2D THz-Raman spectroscopy using a non-Markovian Brownian oscillator model with nonlinear system-bath interactions. J Chem Phys 2015; 142:212421. [DOI: 10.1063/1.4917033] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Tatsushi Ikeda
- Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan
| | - Hironobu Ito
- Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan
| | - Yoshitaka Tanimura
- Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan
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13
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Hamm P. 2D-Raman-THz spectroscopy: a sensitive test of polarizable water models. J Chem Phys 2015; 141:184201. [PMID: 25399140 DOI: 10.1063/1.4901216] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
In a recent paper, the experimental 2D-Raman-THz response of liquid water at ambient conditions has been presented [J. Savolainen, S. Ahmed, and P. Hamm, Proc. Natl. Acad. Sci. U. S. A. 110, 20402 (2013)]. Here, all-atom molecular dynamics simulations are performed with the goal to reproduce the experimental results. To that end, the molecular response functions are calculated in a first step, and are then convoluted with the laser pulses in order to enable a direct comparison with the experimental results. The molecular dynamics simulation are performed with several different water models: TIP4P/2005, SWM4-NDP, and TL4P. As polarizability is essential to describe the 2D-Raman-THz response, the TIP4P/2005 water molecules are amended with either an isotropic or a anisotropic polarizability a posteriori after the molecular dynamics simulation. In contrast, SWM4-NDP and TL4P are intrinsically polarizable, and hence the 2D-Raman-THz response can be calculated in a self-consistent way, using the same force field as during the molecular dynamics simulation. It is found that the 2D-Raman-THz response depends extremely sensitively on details of the water model, and in particular on details of the description of polarizability. Despite the limited time resolution of the experiment, it could easily distinguish between various water models. Albeit not perfect, the overall best agreement with the experimental data is obtained for the TL4P water model.
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Affiliation(s)
- Peter Hamm
- Department of Chemistry, University of Zurich, Winterthurerstr. 190, CH-8057 Zürich, Switzerland
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14
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Ito H, Hasegawa T, Tanimura Y. Calculating two-dimensional THz-Raman-THz and Raman-THz-THz signals for various molecular liquids: The samplers. J Chem Phys 2014; 141:124503. [PMID: 25273447 DOI: 10.1063/1.4895908] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Hironobu Ito
- Department of Chemistry, Graduate School of Science, Kyoto University, Sakyoku, Kyoto 606-8502, Japan
| | - Taisuke Hasegawa
- Department of Chemistry, Graduate School of Science, Kyoto University, Sakyoku, Kyoto 606-8502, Japan
- Department of Physics, University of Hamburg, Centre for Free Electron Laser Science, DESY, Notkestrasse 85, D-22607 Hamburg, Germany
| | - Yoshitaka Tanimura
- Department of Chemistry, Graduate School of Science, Kyoto University, Sakyoku, Kyoto 606-8502, Japan
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15
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Jeon J, Cho M. An Accurate Classical Simulation of a Two-Dimensional Vibrational Spectrum: OD Stretch Spectrum of a Hydrated HOD Molecule. J Phys Chem B 2014; 118:8148-61. [DOI: 10.1021/jp501182d] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Jonggu Jeon
- Department
of Chemistry, Korea University, Seoul 136-701, Korea
| | - Minhaeng Cho
- Department
of Chemistry, Korea University, Seoul 136-701, Korea
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16
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Abstract
Two-dimensional Raman-terahertz (THz) spectroscopy is presented as a multidimensional spectroscopy directly in the far-IR regime. The method is used to explore the dynamics of the collective intermolecular modes of liquid water at ambient temperatures that emerge from the hydrogen-bond networks water forming. Two-dimensional Raman-THz spectroscopy interrogates these modes twice and as such can elucidate couplings and inhomogeneities of the various degrees of freedoms. An echo in the 2D Raman-THz response is indeed identified, indicating that a heterogeneous distribution of hydrogen-bond networks exists, albeit only on a very short 100-fs timescale. This timescale appears to be too short to be compatible with more extended, persistent structures assumed within a two-state model of water.
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17
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Sun X, Stratt RM. How a solute-pump/solvent-probe spectroscopy can reveal structural dynamics: Polarizability response spectra as a two-dimensional solvation spectroscopy. J Chem Phys 2013; 139:044506. [DOI: 10.1063/1.4816373] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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18
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Hamm P, Savolainen J. Two-dimensional-Raman-terahertz spectroscopy of water: Theory. J Chem Phys 2012; 136:094516. [DOI: 10.1063/1.3691601] [Citation(s) in RCA: 55] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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19
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Sakurai A, Tanimura Y. Does ℏ Play a Role in Multidimensional Spectroscopy? Reduced Hierarchy Equations of Motion Approach to Molecular Vibrations. J Phys Chem A 2011; 115:4009-22. [DOI: 10.1021/jp1095618] [Citation(s) in RCA: 56] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Atsunori Sakurai
- Department of Chemistry, Graduate School of Science, Kyoto Universiy, Kyoto 606-8502, Japan
| | - Yoshitaka Tanimura
- Department of Chemistry, Graduate School of Science, Kyoto Universiy, Kyoto 606-8502, Japan
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20
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Palmieri B, Nagata Y, Mukamel S. Phase-space algorithm for simulating quantum nonlinear response functions of bosons using stochastic classical trajectories. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2010; 82:046706. [PMID: 21230411 PMCID: PMC3709579 DOI: 10.1103/physreve.82.046706] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/24/2010] [Indexed: 11/07/2022]
Abstract
Using the positive P-representation of the density matrix, we develop an algorithm for calculating the quantum many-body nonlinear response functions of a system of bosons driven impulsively by external fields. The formalism maps the quantum time evolution of N boson degrees of freedom into a stochastic dynamics of 4N classical degrees of freedom. The first- and the third-order response functions are calculated by propagating the parameters of the P-representation using a set of coupled Langevin equations with multiplicative noise. These parameters serve as classical variables. Two classical ways for computing the response functions are presented. In the nonequilibrium method, an observable is calculated for weak impulsive pulses, and the response functions are obtained by taking its derivatives with respect to the pulse amplitudes. In the alternative, equilibrium simulation, the response functions are expressed in terms of time-correlation functions involving the P-representation parameters and stability matrices representing the perturbation of the trajectories. The stability matrices can be propagated simultaneously with the Langevin equations for the parameters. The formalism is generalized for a many-body boson system coupled to a harmonic bath.
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Affiliation(s)
- Benoit Palmieri
- Department of Chemistry, University of California, Irvine, California 92697-2025, USA
| | - Yuki Nagata
- Department of Chemistry, University of California, Irvine, California 92697-2025, USA
| | - Shaul Mukamel
- Department of Chemistry, University of California, Irvine, California 92697-2025, USA
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21
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Yagasaki T, Saito S. Molecular dynamics simulation of nonlinear spectroscopies of intermolecular motions in liquid water. Acc Chem Res 2009; 42:1250-8. [PMID: 19469530 DOI: 10.1021/ar900007s] [Citation(s) in RCA: 45] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Abstract
Water is the most extensively studied of liquids because of both its ubiquity and its anomalous thermodynamic and dynamic properties. The properties of water are dominated by hydrogen bonds and hydrogen bond network rearrangements. Fundamental information on the dynamics of liquid water has been provided by linear infrared (IR), Raman, and neutron-scattering experiments; molecular dynamics simulations have also provided insights. Recently developed higher-order nonlinear spectroscopies open new windows into the study of the hydrogen bond dynamics of liquid water. For example, the vibrational lifetimes of stretches and a bend, intramolecular features of water dynamics, can be accurately measured and are found to be on the femtosecond time scale at room temperature. Higher-order nonlinear spectroscopy is expressed by a multitime correlation function, whereas traditional linear spectroscopy is given by a one-time correlation function. Thus, nonlinear spectroscopy yields more detailed information on the dynamics of condensed media than linear spectroscopy. In this Account, we describe the theoretical background and methods for calculating higher order nonlinear spectroscopy; equilibrium and nonequilibrium molecular dynamics simulations, and a combination of both, are used. We also present the intermolecular dynamics of liquid water revealed by fifth-order two-dimensional (2D) Raman spectroscopy and third-order IR spectroscopy. 2D Raman spectroscopy is sensitive to couplings between modes; the calculated 2D Raman signal of liquid water shows large anharmonicity in the translational motion and strong coupling between the translational and librational motions. Third-order IR spectroscopy makes it possible to examine the time-dependent couplings. The 2D IR spectra and three-pulse photon echo peak shift show the fast frequency modulation of the librational motion. A significant effect of the translational motion on the fast frequency modulation of the librational motion is elucidated by introducing the "translation-free" molecular dynamics simulation. The isotropic pump-probe signal and the polarization anisotropy decay show fast transfer of the librational energy to the surrounding water molecules, followed by relaxation to the hot ground state. These theoretical methods do not require frequently used assumptions and can thus be called ab initio methods; together with multidimensional nonlinear spectroscopies, they provide powerful methods for examining the inter- and intramolecular details of water dynamics.
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Affiliation(s)
- Takuma Yagasaki
- Department of Theoretical and Computational Molecular Science, Institute for Molecular Science, Myodaiji, Okazaki, Aichi, 444-8585, Japan
| | - Shinji Saito
- Department of Theoretical and Computational Molecular Science, Institute for Molecular Science, Myodaiji, Okazaki, Aichi, 444-8585, Japan
- The Graduate University for Advanced Studies, Myodaiji, Okazaki, Aichi, 444-8585, Japan
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22
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Jeon J, Yang S, Choi JH, Cho M. Computational vibrational spectroscopy of peptides and proteins in one and two dimensions. Acc Chem Res 2009; 42:1280-9. [PMID: 19456096 DOI: 10.1021/ar900014e] [Citation(s) in RCA: 65] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Abstract
Vibrational spectroscopy provides direct information on molecular environment and motions but, its interpretation is often hampered by band broadening. Over the past decade, two-dimensional (2D) vibrational spectroscopy has emerged as a promising technique to overcome a number of difficulties associated with linear spectroscopy and provided significantly detailed information on the structure and dynamics of complex molecules in condensed phases. This Account reviews recently developed computational methods used to simulate 1D and 2D vibrational spectra. The central quantity to calculate in computational spectroscopy is the spectroscopic response function, which is the product of many contributing factors such as vibrational transition energies, transition moments, and their modulations by fluctuating local environment around a solute. Accurate calculations of such linear and nonlinear responses thus require a concerted effort employing a wide range of methods including electronic structure calculation (ESC) and molecular dynamics (MD) simulation. The electronic structure calculation can provide fundamental quantities such as normal-mode frequencies and transition multipole strengths. However, since the treatable system size is limited with this method, classical MD simulation has also been used to account for the dynamics of the solvent environment. To achieve chemical accuracy, these two results are combined to generate time series of fluctuating transition frequencies and transition moments with the distributed multipole analysis, and this particular approach has been known as the hybrid ESC/MD method. For coupled multichromophore systems, vibrational properties of each chromophore such as a peptide are individually calculated by electronic structure methods and the Hessian matrix reconstruction scheme was used to obtain local mode frequencies and couplings of constituting anharmonic oscillators. The spectra thus obtained, especially for biomolecules including polypeptides and proteins, have proven to be reliable and in good agreement with experimental spectra. An alternative to the hybrid method has also been developed, where the classical limit of the vibrational response function was considered. Its main attraction is the capability to obtain the spectra directly from a set of MD trajectories. A novel development along this direction has been achieved by using quantum mechanical/molecular mechanical (QM/MM) force fields for the accurate description of vibrational anharmonicity and chromophore polarization effects. The latter aspects are critical in the 2D case because classical force fields employing harmonic intramolecular potential cannot produce reliable 2D signal. We anticipate that the computational methods presented here will continue to evolve along with experimental advancements and will be of use to further elucidate ultrafast dynamics of chemical and biological systems.
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Affiliation(s)
- Jonggu Jeon
- Department of Chemistry and Center for Multidimensional Spectroscopy, Korea University, Seoul 136-701, Korea
| | - Seongeun Yang
- Department of Chemistry and Center for Multidimensional Spectroscopy, Korea University, Seoul 136-701, Korea
| | - Jun-Ho Choi
- Department of Chemistry and Center for Multidimensional Spectroscopy, Korea University, Seoul 136-701, Korea
| | - Minhaeng Cho
- Department of Chemistry and Center for Multidimensional Spectroscopy, Korea University, Seoul 136-701, Korea
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23
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Tanimura Y, Ishizaki A. Modeling, calculating, and analyzing multidimensional vibrational spectroscopies. Acc Chem Res 2009; 42:1270-9. [PMID: 19441802 DOI: 10.1021/ar9000444] [Citation(s) in RCA: 69] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
Spectral line shapes in a condensed phase contain information from various dynamic processes that modulate the transition energy, such as microscopic dynamics, inter- and intramolecular couplings, and solvent dynamics. Because nonlinear response functions are sensitive to the complex dynamics of chemical processes, multidimensional vibrational spectroscopies can separate these processes. In multidimensional vibrational spectroscopy, the nonlinear response functions of a molecular dipole or polarizability are measured using ultrashort pulses to monitor inter- and intramolecular vibrational motions. Because a complex profile of such signals depends on the many dynamic and structural aspects of a molecular system, researchers would like to have a theoretical understanding of these phenomena. In this Account, we explore and describe the roles of different physical phenomena that arise from the peculiarities of the system-bath coupling in multidimensional spectra. We also present simple analytical expressions for a weakly coupled multimode Brownian system, which we use to analyze the results obtained by the experiments and simulations. To calculate the nonlinear optical response, researchers commonly use a particular form of a system Hamiltonian fit to the experimental results. The optical responses of molecular vibrational motions have been studied in either an oscillator model or a vibration energy state model. In principle, both models should give the same results as long as the energy states are chosen to be the eigenstates of the oscillator model. The energy state model can provide a simple description of nonlinear optical processes because the diagrammatic Liouville space theory that developed in the electronically resonant spectroscopies can easily handle three or four energy states involved in high-frequency vibrations. However, the energy state model breaks down if we include the thermal excitation and relaxation processes in the dynamics to put the system in a thermal equilibrium state. The roles of these excitation and relaxation processes are different and complicated compared with those in the resonant spectroscopy. Observing the effects of such thermal processes is more intuitive with the oscillator model because the bath modes, which cause the fluctuation and dissipation processes, are also described in the coordinate space. This coordinate space system-bath approach complements a realistic full molecular dynamics simulation approach. By comparing the calculated 2D spectra from the coordinate space model and the energy state model, we can examine the role of thermal processes and anharmonic mode-mode couplings in the energy state model. For this purpose, we employed the Brownian oscillator model with the nonlinear system-bath interaction. Using the hierarchy formalism, we could precisely calculate multidimensional spectra for a single and multimode anharmonic system for inter- and intramolecular vibrational modes.
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Affiliation(s)
- Yoshitaka Tanimura
- Department of Chemistry, Graduate School of Science, Kyoto University Kitashirakawa, Sakyoku, Kyoto 606-8502, Japan
| | - Akihito Ishizaki
- Department of Chemistry, Graduate School of Science, Kyoto University Kitashirakawa, Sakyoku, Kyoto 606-8502, Japan
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Li YL, Huang L, Dwayne Miller RJ, Hasegawa T, Tanimura Y. Two-dimensional fifth-order Raman spectroscopy of liquid formamide: Experiment and Theory. J Chem Phys 2008; 128:234507. [DOI: 10.1063/1.2927311] [Citation(s) in RCA: 48] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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25
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Hasegawa T, Tanimura Y. Nonequilibrium molecular dynamics simulations with a backward-forward trajectories sampling for multidimensional infrared spectroscopy of molecular vibrational modes. J Chem Phys 2008; 128:064511. [DOI: 10.1063/1.2828189] [Citation(s) in RCA: 43] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023] Open
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26
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Nagata Y, Tanimura Y, Mukamel S. Two-dimensional infrared surface spectroscopy for CO on Cu(100): Detection of intermolecular coupling of adsorbates. J Chem Phys 2007; 126:204703. [PMID: 17552785 DOI: 10.1063/1.2727445] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023] Open
Abstract
Surface-specific infrared signals obtained by subjecting the system to two infrared laser pulses are calculated for an admixture of CO and isotopic CO on Cu(100) by using molecular dynamics simulation based on a stability matrix formalism. The two-dimensional profiles of the signals in the frequency domain show both diagonal and cross peaks. The former peaks mainly arise from the overtones of the CO and isotopic CO, while the latter represent the couplings between those. As temperature is increased, the phases of cross peaks in a second-order infrared response function change significantly, while those of diagonal peaks are unchanged. The authors show that the phase shifts are originated from the potential anharmonicities due to the electronic interaction between adsorbates. Using a model with two dipole moments, they find that the frustrated rotational mode activated with temperature has effects on the anharmonicity. These results indicate that two-dimensional infrared surface spectroscopy reveals the anharmonic couplings between adsorbates and surface atoms or between adsorbates which cannot be observed in first-order spectroscopy.
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Affiliation(s)
- Yuki Nagata
- Department of Chemistry, Graduate School of Science, Kyoto University, Sakyo, Kyoto 606-8502, Japan
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DeVane R, Space B, Jansen TLC, Keyes T. Time correlation function and finite field approaches to the calculation of the fifth order Raman response in liquid xenon. J Chem Phys 2006; 125:234501. [PMID: 17190561 DOI: 10.1063/1.2403129] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023] Open
Abstract
The fifth order, two-dimensional Raman response in liquid xenon is calculated via a time correlation function (TCF) theory and the numerically exact finite field method. Both employ classical molecular dynamics simulations. The results are shown to be in excellent agreement, suggesting the efficacy of the TCF approach, in which the response function is written approximately in terms of a single classical multitime TCF.
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Affiliation(s)
- Russell DeVane
- Center for Molecular Modeling, Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104-6323, USA
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29
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Ishizaki A, Tanimura Y. Modeling vibrational dephasing and energy relaxation of intramolecular anharmonic modes for multidimensional infrared spectroscopies. J Chem Phys 2006; 125:084501. [PMID: 16965023 DOI: 10.1063/1.2244558] [Citation(s) in RCA: 100] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Starting from a system-bath Hamiltonian in a molecular coordinate representation, we examine an applicability of a stochastic multilevel model for vibrational dephasing and energy relaxation in multidimensional infrared spectroscopy. We consider an intramolecular anharmonic mode nonlinearly coupled to a colored noise bath at finite temperature. The system-bath interaction is assumed linear plus square in the system coordinate, but linear in the bath coordinates. The square-linear system-bath interaction leads to dephasing due to the frequency fluctuation of system vibration, while the linear-linear interaction contributes to energy relaxation and a part of dephasing arises from anharmonicity. To clarify the role and origin of vibrational dephasing and energy relaxation in the stochastic model, the system part is then transformed into an energy eigenstate representation without using the rotating wave approximation. Two-dimensional (2D) infrared spectra are then calculated by solving a low-temperature corrected quantum Fokker-Planck (LTC-QFP) equation for a colored noise bath and by the stochastic theory. In motional narrowing regime, the spectra from the stochastic model are quite different from those from the LTC-QFP. In spectral diffusion regime, however, the 2D line shapes from the stochastic model resemble those from the LTC-QFP besides the blueshifts caused by the dissipation from the colored noise bath. The preconditions for validity of the stochastic theory for molecular vibrational motion are also discussed.
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Affiliation(s)
- Akihito Ishizaki
- Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan.
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30
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Hasegawa T, Tanimura Y. Calculating fifth-order Raman signals for various molecular liquids by equilibrium and nonequilibrium hybrid molecular dynamics simulation algorithms. J Chem Phys 2006; 125:074512. [PMID: 16942356 DOI: 10.1063/1.2217947] [Citation(s) in RCA: 53] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023] Open
Abstract
The fifth-order two-dimensional (2D) Raman signals have been calculated from the equilibrium and nonequilibrium (finite field) molecular dynamics simulations. The equilibrium method evaluates response functions with equilibrium trajectories, while the nonequilibrium method calculates a molecular polarizability from nonequilibrium trajectories for different pulse configurations and sequences. In this paper, we introduce an efficient algorithm which hybridizes the existing two methods to avoid the time-consuming calculations of the stability matrices which are inherent in the equilibrium method. Using nonequilibrium trajectories for a single laser excitation, we are able to dramatically simplify the sampling process. With this approach, the 2D Raman signals for liquid xenon, carbon disulfide, water, acetonitrile, and formamide are calculated and discussed. Intensities of 2D Raman signals are also estimated and the peak strength of formamide is found to be only five times smaller than that of carbon disulfide.
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Affiliation(s)
- Taisuke Hasegawa
- Department of Chemistry, Graduate School of Science, Kyoto University, Sakyo, Kyoto 606-8502, Japan.
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31
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Nagata Y, Hasegawa T, Tanimura Y. Analyzing atomic liquids and solids by means of two-dimensional Raman spectra in frequency domain. J Chem Phys 2006; 124:194504. [PMID: 16729822 DOI: 10.1063/1.2191850] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023] Open
Abstract
A practical method to evaluate the contributions of the nonlinear polarizability and anharmonicity of potentials from the experimental and simulation data by using double Fourier transformation is presented. In a Lennard-Jones potential system, an approximated expression of the fifth-order response function using the ratio between nonlinear polarizability and anharmonicity exhibits a good agreement with the results of the molecular dynamics simulation. In a soft-core case, the fifth-order Raman signal indicates that the system consists of the delocalized and localized modes, and only the delocalized mode affects the dramatic change of the fifth-order Raman response functions between solid and liquid phases through nonlinear polarizability.
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Affiliation(s)
- Yuki Nagata
- Department of Chemistry, Graduate School of Science, Kyoto University, Sakyoku, Kyoto 606-8502, Japan.
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32
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Kryvohuz M, Cao J. Classical divergence of nonlinear response functions. PHYSICAL REVIEW LETTERS 2006; 96:030403. [PMID: 16486670 DOI: 10.1103/physrevlett.96.030403] [Citation(s) in RCA: 35] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2005] [Indexed: 05/06/2023]
Abstract
The time divergence of classical nonlinear response functions reveals the fundamental difficulty of dynamic perturbation based on classical mechanics. The nature of the divergence is established for systems in regular motions using asymptotic decomposition of Fourier integrals. The asymptotic analysis shows that the divergence cannot be removed by phase-space averaging such as the Boltzmann distribution function. The implications of this study are discussed in the context of the conceptual development of quantum-classical correspondence in dynamic response.
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Affiliation(s)
- Maksym Kryvohuz
- Department of Chemistry, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA
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33
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Nagata Y, Tanimura Y. Two-dimensional Raman spectra of atomic solids and liquids. J Chem Phys 2006; 124:024508. [PMID: 16422612 DOI: 10.1063/1.2131053] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We calculate third- and fifth-order Raman spectra of simple atoms interacting through a soft-core potential by means of molecular-dynamics (MD) simulations. The total polarizability of molecules is treated by the dipole-induced dipole model. Two- and three-body correlation functions of the polarizability at various temperatures are evaluated from equilibrium MD simulations based on a stability matrix formulation. To analyze the processes involved in the spectroscopic measurements, we divide the fifth-order response functions into symmetric and antisymmetric integrated response functions; the symmetric one is written as a simple three-body correlation function, while the antisymmetric one depends on a stability matrix. This analysis leads to a better understanding of the time scales and molecular motions that govern the two-dimensional (2D) signal. The 2D Raman spectra show novel differences between the solid and liquid phases, which are associated with the decay rates of coherent motions. On the other hand, these differences are not observed in the linear Raman spectra.
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Affiliation(s)
- Yuki Nagata
- Department of Chemistry, Kyoto University, Oiwakecho, Kitashirakawa, Sakyoku, Kyoto 606-8502, Japan.
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34
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DeVane R, Ridley C, Space B, Keyes T. Applications of a time correlation function theory for the fifth-order Raman response function I: Atomic liquids. J Chem Phys 2005; 123:194507. [PMID: 16321100 DOI: 10.1063/1.2038768] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023] Open
Abstract
Multidimensional spectroscopy has the ability to provide great insight into the complex dynamics and time-resolved structure of liquids. Theoretically describing these experiments requires calculating the nonlinear-response function, which is a combination of quantum-mechanical time correlation functions R5(t1,t2) was expressed with a two-time, computationally tractable, classical TCF. Writing the response function in terms of classical TCFs brings the full power of atomistically detailed molecular dynamics to the problem. In this paper, the new TCF theory is employed to calculate the fifth-order Raman response function for liquid xenon and investigate several of the polarization conditions for which experiments can be performed on an isotropic system. The theory is shown to reproduce line-shape characteristics predicted by earlier theoretical work.
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Affiliation(s)
- Russell DeVane
- Department of Chemistry, University of South Florida, 4202 East Fowler Avenue, SCA400, Tampa, FL 33620-5250, USA
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35
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Kryvohuz M, Cao J. Quantum-classical correspondence in response theory. PHYSICAL REVIEW LETTERS 2005; 95:180405. [PMID: 16383881 DOI: 10.1103/physrevlett.95.180405] [Citation(s) in RCA: 43] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/20/2005] [Indexed: 05/05/2023]
Abstract
The correspondence principle between the quantum commutator [A, B] and the classical Poisson brackets iota h{A, B} is examined in the context of response theory. The classical response function is obtained as the leading term of the expansion of the phase space representation of the response function in terms of Weyl-Wigner transformations and is shown to increase without bound at long times as a result of ignoring divergent higher-order contributions. Systematical inclusion of higher-order contributions improves the accuracy of the h expansion at finite times. Resummation of all the higher-order terms establishes the classical-quantum correspondence <v + n|alpha(t)v> <--> alpha n e iota n omega t|Jv + nh/2. The time interval of the validity of the simple classical limit [A(t), B(0)] --> iota h{A(t), B(0)} is estimated for quasiperiodic dynamics and is shown to be inversely proportional to anharmonicity.
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Affiliation(s)
- Maksym Kryvohuz
- Department of Chemistry, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA
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36
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Keyes T, Kim J. Qualitative features of the two-dimensional Raman spectrum in liquids. J Chem Phys 2005; 122:244502. [PMID: 16035777 DOI: 10.1063/1.1931627] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023] Open
Abstract
The theory presented earlier [J. Kim and T. Keyes, Phys. Rev. E 66, 051110 (2002)] is analyzed to determine the information available from the two-dimensional Raman spectrum R((5))(t(2),t(1)) in liquids. The known spectra are well represented by the sum of two products of ordinary time correlations predicted by the theory. The shape of R((5)) is related in general to the values of simple same-time averages and concepts amenable to physical intuition. Using standard models for the time correlations entering the theory, specific analytic expressions for the spectrum are obtained depending on two parameters and a time scale, and the behavior of the spectrum is mapped out in the parameter space.
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Affiliation(s)
- T Keyes
- Department of Chemistry, Boston University, Massachusetts 02215, USA.
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37
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Kryvohuz M, Cao J. Nondivergent classical response functions from uncertainty principle: Quasiperiodic systems. J Chem Phys 2005; 122:024109. [PMID: 15638574 DOI: 10.1063/1.1827212] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Time-divergence in linear and nonlinear classical response functions can be removed by taking a phase-space average within the quantized uncertainty volume O(hn) around the microcanonical energy surface. For a quasiperiodic system, the replacement of the microcanonical distribution density in the classical response function with the quantized uniform distribution density results in agreement of quantum and classical expressions through Heisenberg's correspondence principle: each matrix element (u/alpha(t)/v) corresponds to the (u-v)th Fourier component of alpha(t) evaluated along the classical trajectory with mean action (Ju+Jv)/2. Numerical calculations for one- and two-dimensional systems show good agreement between quantum and classical results. The generalization to the case of N degrees of freedom is made. Thus, phase-space averaging within the quantized uncertainty volume provides a useful way to establish the classical-quantum correspondence for the linear and nonlinear response functions of a quasiperiodic system.
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Affiliation(s)
- Maksym Kryvohuz
- Department of Chemistry, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA
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38
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DeVane R, Ridley C, Space B, Keyes T. Tractable theory of nonlinear response and multidimensional nonlinear spectroscopy. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2004; 70:050101. [PMID: 15600576 DOI: 10.1103/physreve.70.050101] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/04/2004] [Indexed: 05/24/2023]
Abstract
Nonlinear spectroscopy provides insights into dynamics, but the response functions required for its interpretation pose a challenge to theorists. We proposed an approach in which the fifth-order response function [R5( t1, t2)] was expressed as a two-time classical time correlation function (TCF). Here, we present TCF theory results for R5( t1, t2) in liquid xenon. Using a first-order dipole-induced dipole polarizability model, the result is compared to an exact numerical calculation showing remarkable agreement. In addition, R5( t1, t2) is calculated using the exactly solved polarizability model, yielding different results and predicting an echo signal.
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Affiliation(s)
- Russell DeVane
- Department of Chemistry, University of South Florida, 4202 E. Fowler Avenue, SCA400, Tampa, FL 33620-5250, USA
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39
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Mukamel S, Maddox JB. All-forward semiclassical simulations of nonlinear response functions. J Chem Phys 2004; 121:36-43. [PMID: 15260520 DOI: 10.1063/1.1756582] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022] Open
Abstract
We propose a quantum trajectory algorithm for computing nonlinear response functions of condensed phase molecular systems based on a time-ordered expansion of the density matrix. The nth-order response function is expressed as a sum of 2(n) impulsive response pathways representing trajectories involving zero, one, and up to n interactions with short external pulses. These are evaluated using a forward propagation algorithm based upon a Liouville space extension of the Bohmian propagation method.
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Affiliation(s)
- Shaul Mukamel
- Department of Chemistry, University of California-Irvine, Irvine, California 92697-2025, USA.
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40
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Kato T, Tanimura Y. Two-dimensional Raman and infrared vibrational spectroscopy for a harmonic oscillator system nonlinearly coupled with a colored noise bath. J Chem Phys 2004; 120:260-71. [PMID: 15267286 DOI: 10.1063/1.1629272] [Citation(s) in RCA: 64] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023] Open
Abstract
Multidimensional vibrational response functions of a harmonic oscillator are reconsidered by assuming nonlinear system-bath couplings. In addition to a standard linear-linear (LL) system-bath interaction, we consider a square-linear (SL) interaction. The LL interaction causes the vibrational energy relaxation, while the SL interaction is mainly responsible for the vibrational phase relaxation. The dynamics of the relevant system are investigated by the numerical integration of the Gaussian-Markovian Fokker-Planck equation under the condition of strong couplings with a colored noise bath, where the conventional perturbative approach cannot be applied. The response functions for the fifth-order nonresonant Raman and the third-order infrared (or equivalently the second-order infrared and the seventh-order nonresonant Raman) spectra are calculated under the various combinations of the LL and the SL coupling strengths. Calculated two-dimensional response functions demonstrate that those spectroscopic techniques are very sensitive to the mechanism of the system-bath couplings and the correlation time of the bath fluctuation. We discuss the primary optical transition pathways involved to elucidate the corresponding spectroscopic features and to relate them to the microscopic sources of the vibrational nonlinearity induced by the system-bath interactions. Optical pathways for the fifth-order Raman spectroscopies from an "anisotropic" medium were newly found in this study, which were not predicted by the weak system-bath coupling theory or the standard Brownian harmonic oscillator model.
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Affiliation(s)
- Tsuyoshi Kato
- Institute for Molecular Science, Myodaiji, Okazaki, Aichi 444-8585, Japan
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41
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Dellago C, Mukamel S. Simulation algorithms for multidimensional nonlinear response of classical many-body systems. J Chem Phys 2003. [DOI: 10.1063/1.1616911] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023] Open
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42
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Saito S, Ohmine I. Off-resonant two-dimensional fifth-order Raman spectroscopy of liquid CS2: Detection of anharmonic dynamics. J Chem Phys 2003. [DOI: 10.1063/1.1609984] [Citation(s) in RCA: 55] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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43
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Ma A, Stratt RM. Selecting the information content of two-dimensional Raman spectra in liquids. J Chem Phys 2003. [DOI: 10.1063/1.1611873] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023] Open
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44
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Jansen TLC, Mukamel S. Semiclassical mode-coupling factorizations of coherent nonlinear optical response. J Chem Phys 2003. [DOI: 10.1063/1.1610437] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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45
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DeVane R, Ridley C, Space B, Keyes T. A time correlation function theory for the fifth order Raman response function with applications to liquid CS2. J Chem Phys 2003. [DOI: 10.1063/1.1601607] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022] Open
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46
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The Effect of Induced Multipoles on the Fifth-order Raman Response. B KOREAN CHEM SOC 2003. [DOI: 10.5012/bkcs.2003.24.8.1102] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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47
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What Do We Learn from Two-Dimensional Raman Spectra by Varying the Polarization Conditions? B KOREAN CHEM SOC 2003. [DOI: 10.5012/bkcs.2003.24.8.1126] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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48
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Mukamel S. Superoperator representation of nonlinear response: unifying quantum field and mode coupling theories. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2003; 68:021111. [PMID: 14524957 DOI: 10.1103/physreve.68.021111] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/17/2003] [Indexed: 05/24/2023]
Abstract
Computing response functions by following the time evolution of superoperators in Liouville space (whose vectors are ordinary Hilbert space operators) offers an attractive alternative to the diagrammatic perturbative expansion of many-body equilibrium and nonequilibrium Green's functions. The bookkeeping of time ordering is naturally maintained in real (physical) time, allowing the formulation of Wick's theorem for superoperators, giving a factorization of higher order response functions in terms of two fundamental Green's functions. Backward propagations and analytic continuations using artificial times (Keldysh loops and Matsubara contours) are avoided. A generating functional for nonlinear response functions unifies quantum field theory and the classical mode coupling formalism of nonlinear hydrodynamics and may be used for semiclassical expansions. Classical response functions are obtained without the explicit computation of stability matrices.
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Affiliation(s)
- Shaul Mukamel
- Departments of Chemistry and Physics and Astronomy, University of Rochester, Rochester, New York 14627-0216, USA.
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49
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Okumura K, Tanimura Y. Energy-Level Diagrams and Their Contribution to Fifth-Order Raman and Second-Order Infrared Responses: Distinction between Relaxation Models by Two-Dimensional Spectroscopy. J Phys Chem A 2003. [DOI: 10.1021/jp027360o] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Affiliation(s)
- Ko Okumura
- Department of Physics, Graduate School of Humanities and Sciences, Ochanomizu, University, 2-1-1, Otsuka, Bunkyo-ku, Tokyo 112-8610, Japan, and Physique de la Matière Condensée, Collège de France, 11 place Marcelin-Berthelot, 75231 Paris Cedex 05, France
| | - Yoshitaka Tanimura
- Theoretical Studies, Institute for Molecular Science, Okazaki, Aichi 444-8585, Japan
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50
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Dellago C, Mukamel S. Simulation strategies and signatures of chaos in classical nonlinear response. PHYSICAL REVIEW E 2003; 67:035205. [PMID: 12689125 DOI: 10.1103/physreve.67.035205] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/02/2002] [Indexed: 11/07/2022]
Abstract
Algorithms are presented for overcoming the computational challenge of nonlinear response functions which describe the response of a classical system to a sequence of n pulses and depend on nth order multipoint stability matrices containing signatures of chaos. Simulations for the Lorentz gas demonstrate that finite field algorithms can be effectively used for the robust, long time calculation of nonlinear response functions. These offer the possibility to characterize chaos beyond the commonly used Lyapunov exponents and suggest new experimentally accessible measures of chaos.
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Affiliation(s)
- Christoph Dellago
- Department of Chemistry, University of Rochester, New York 14627, USA
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