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For: Sander LM, Tkachenko AV. Kinetic pinning and biological antifreezes. Phys Rev Lett 2004;93:128102. [PMID: 15447309 DOI: 10.1103/physrevlett.93.128102] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/12/2004] [Indexed: 05/24/2023]
Number Cited by Other Article(s)
1
Thosar AU, Cai Y, Marks SM, Vicars Z, Choi J, Pallath A, Patel AJ. On the engulfment of antifreeze proteins by ice. Proc Natl Acad Sci U S A 2024;121:e2320205121. [PMID: 38833468 PMCID: PMC11181090 DOI: 10.1073/pnas.2320205121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2023] [Accepted: 04/16/2024] [Indexed: 06/06/2024]  Open
2
Sirotinskaya V, Bar Dolev M, Yashunsky V, Bahari L, Braslavsky I. Extended Temperature Range of the Ice-Binding Protein Activity. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2024;40:7395-7404. [PMID: 38527127 PMCID: PMC11008235 DOI: 10.1021/acs.langmuir.3c03710] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2023] [Revised: 03/07/2024] [Accepted: 03/08/2024] [Indexed: 03/27/2024]
3
Drori R, Stevens CA. Divergent Mechanisms of Ice Growth Inhibition by Antifreeze Proteins. Methods Mol Biol 2024;2730:169-181. [PMID: 37943458 DOI: 10.1007/978-1-0716-3503-2_12] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2023]
4
Farag H, Peters B. Engulfment Avalanches and Thermal Hysteresis for Antifreeze Proteins on Supercooled Ice. J Phys Chem B 2023. [PMID: 37294871 DOI: 10.1021/acs.jpcb.3c01089] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
5
Farag H, Peters B. Free energy barriers for anti-freeze protein engulfment in ice: Effects of supercooling, footprint size, and spatial separation. J Chem Phys 2023;158:094501. [PMID: 36889941 DOI: 10.1063/5.0131983] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]  Open
6
Kamat K, Naullage PM, Molinero V, Peters B. Oriented attachment kinetics for rod-like particles at a flat surface: Buffon's needle at the nanoscale. J Chem Phys 2022;157:214113. [PMID: 36511557 DOI: 10.1063/5.0124531] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]  Open
7
Gharib G, Saeidiharzand S, Sadaghiani AK, Koşar A. Antifreeze Proteins: A Tale of Evolution From Origin to Energy Applications. Front Bioeng Biotechnol 2022;9:770588. [PMID: 35186912 PMCID: PMC8851421 DOI: 10.3389/fbioe.2021.770588] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2021] [Accepted: 12/31/2021] [Indexed: 11/19/2022]  Open
8
Naullage PM, Molinero V. Slow Propagation of Ice Binding Limits the Ice-Recrystallization Inhibition Efficiency of PVA and Other Flexible Polymers. J Am Chem Soc 2020;142:4356-4366. [DOI: 10.1021/jacs.9b12943] [Citation(s) in RCA: 34] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
9
Chasnitsky M, Braslavsky I. Ice-binding proteins and the applicability and limitations of the kinetic pinning model. PHILOSOPHICAL TRANSACTIONS. SERIES A, MATHEMATICAL, PHYSICAL, AND ENGINEERING SCIENCES 2019;377:20180391. [PMID: 30982449 PMCID: PMC6501913 DOI: 10.1098/rsta.2018.0391] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 02/19/2019] [Indexed: 06/09/2023]
10
Hudait A, Qiu Y, Odendahl N, Molinero V. Hydrogen-Bonding and Hydrophobic Groups Contribute Equally to the Binding of Hyperactive Antifreeze and Ice-Nucleating Proteins to Ice. J Am Chem Soc 2019;141:7887-7898. [DOI: 10.1021/jacs.9b02248] [Citation(s) in RCA: 56] [Impact Index Per Article: 11.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
11
Combined molecular dynamics and neural network method for predicting protein antifreeze activity. Proc Natl Acad Sci U S A 2018;115:13252-13257. [PMID: 30530650 DOI: 10.1073/pnas.1814945115] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]  Open
12
Growth suppression of ice crystal basal face in the presence of a moderate ice-binding protein does not confer hyperactivity. Proc Natl Acad Sci U S A 2018;115:7479-7484. [PMID: 29967176 DOI: 10.1073/pnas.1807461115] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
13
Midya US, Bandyopadhyay S. Operation of Kelvin Effect in the Activities of an Antifreeze Protein: A Molecular Dynamics Simulation Study. J Phys Chem B 2018;122:3079-3087. [PMID: 29488381 DOI: 10.1021/acs.jpcb.8b00846] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
14
Shtukenberg AG, Ward MD, Kahr B. Crystal Growth with Macromolecular Additives. Chem Rev 2017;117:14042-14090. [DOI: 10.1021/acs.chemrev.7b00285] [Citation(s) in RCA: 73] [Impact Index Per Article: 10.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
15
Voets IK. From ice-binding proteins to bio-inspired antifreeze materials. SOFT MATTER 2017;13:4808-4823. [PMID: 28657626 PMCID: PMC5708349 DOI: 10.1039/c6sm02867e] [Citation(s) in RCA: 117] [Impact Index Per Article: 16.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/23/2016] [Accepted: 06/16/2017] [Indexed: 05/07/2023]
16
Bar Dolev M, Braslavsky I, Davies PL. Ice-Binding Proteins and Their Function. Annu Rev Biochem 2016;85:515-42. [DOI: 10.1146/annurev-biochem-060815-014546] [Citation(s) in RCA: 216] [Impact Index Per Article: 27.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
17
Kar RK, Bhunia A. Biophysical and biochemical aspects of antifreeze proteins: Using computational tools to extract atomistic information. PROGRESS IN BIOPHYSICS AND MOLECULAR BIOLOGY 2015;119:194-204. [DOI: 10.1016/j.pbiomolbio.2015.09.001] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/24/2015] [Accepted: 09/04/2015] [Indexed: 01/09/2023]
18
Drori R, Davies PL, Braslavsky I. When are antifreeze proteins in solution essential for ice growth inhibition? LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2015;31:5805-5811. [PMID: 25946514 DOI: 10.1021/acs.langmuir.5b00345] [Citation(s) in RCA: 47] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
19
Kuffel A, Czapiewski D, Zielkiewicz J. Unusual structural properties of water within the hydration shell of hyperactive antifreeze protein. J Chem Phys 2015;141:055103. [PMID: 25106616 DOI: 10.1063/1.4891810] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]  Open
20
Drori R, Celik Y, Davies PL, Braslavsky I. Ice-binding proteins that accumulate on different ice crystal planes produce distinct thermal hysteresis dynamics. J R Soc Interface 2015;11:20140526. [PMID: 25008081 PMCID: PMC4233703 DOI: 10.1098/rsif.2014.0526] [Citation(s) in RCA: 51] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]  Open
21
Kutschan B, Morawetz K, Thoms S. Dynamical mechanism of antifreeze proteins to prevent ice growth. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2014;90:022711. [PMID: 25215762 DOI: 10.1103/physreve.90.022711] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/13/2014] [Indexed: 06/03/2023]
22
Microfluidic experiments reveal that antifreeze proteins bound to ice crystals suffice to prevent their growth. Proc Natl Acad Sci U S A 2013;110:1309-14. [PMID: 23300286 DOI: 10.1073/pnas.1213603110] [Citation(s) in RCA: 105] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
23
Wang S, Amornwittawat N, Wen X. Thermodynamic Analysis of Thermal Hysteresis: Mechanistic Insights into Biological Antifreezes. THE JOURNAL OF CHEMICAL THERMODYNAMICS 2012;53:125-130. [PMID: 22822266 PMCID: PMC3398711 DOI: 10.1016/j.jct.2012.04.028] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
24
Hassas-Roudsari M, Goff HD. Ice structuring proteins from plants: Mechanism of action and food application. Food Res Int 2012. [DOI: 10.1016/j.foodres.2011.12.018] [Citation(s) in RCA: 68] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
25
Antifreeze proteins: computer simulation studies on the mechanism of ice growth inhibition. Polym J 2012. [DOI: 10.1038/pj.2012.13] [Citation(s) in RCA: 51] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
26
Superheating of ice crystals in antifreeze protein solutions. Proc Natl Acad Sci U S A 2010;107:5423-8. [PMID: 20215465 DOI: 10.1073/pnas.0909456107] [Citation(s) in RCA: 112] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
27
Weaver M, Qiu S, Friddle R, Casey W, De Yoreo J. How the overlapping timescales for peptide binding and terrace exposure lead to non-linear step dynamics during growth of calcium oxalate monohydrate. CRYSTAL GROWTH & DESIGN 2010;10:2954-2959. [PMID: 20835404 PMCID: PMC2934911 DOI: 10.1021/cg901626a] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/14/2023]
28
The thermal hysteresis activity of the type I antifreeze protein: A statistical mechanics model. Chem Phys Lett 2009. [DOI: 10.1016/j.cplett.2009.02.079] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
29
Varghese AC, Peter Nagy Z, Agarwal A. Current trends, biological foundations and future prospects of oocyte and embryo cryopreservation. Reprod Biomed Online 2009. [DOI: 10.1016/s1472-6483(10)60181-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
30
Knight CA, DeVries AL. Ice growth in supercooled solutions of a biological “antifreeze”, AFGP 1–5: an explanation in terms of adsorption rate for the concentration dependence of the freezing point. Phys Chem Chem Phys 2009;11:5749-61. [DOI: 10.1039/b821256b] [Citation(s) in RCA: 47] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
31
Current trends, biological foundations and future prospects of oocyte and embryo cryopreservation. Reprod Biomed Online 2009;19:126-40. [DOI: 10.1016/s1472-6483(10)60056-9] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
32
Nada H, Furukawa Y. Growth Inhibition Mechanism of an Ice–Water Interface by a Mutant of Winter Flounder Antifreeze Protein: A Molecular Dynamics Study. J Phys Chem B 2008;112:7111-9. [DOI: 10.1021/jp711977g] [Citation(s) in RCA: 65] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
33
Direct visualization of spruce budworm antifreeze protein interacting with ice crystals: basal plane affinity confers hyperactivity. Biophys J 2008;95:333-41. [PMID: 18339740 DOI: 10.1529/biophysj.107.125328] [Citation(s) in RCA: 74] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
34
Weaver ML, Qiu SR, Hoyer JR, Casey WH, Nancollas GH, De Yoreo JJ. Improved model for inhibition of pathological mineralization based on citrate-calcium oxalate monohydrate interaction. Chemphyschem 2007;7:2081-4. [PMID: 16941562 DOI: 10.1002/cphc.200600371] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
35
Wierzbicki A, Dalal P, Cheatham TE, Knickelbein JE, Haymet ADJ, Madura JD. Antifreeze proteins at the ice/water interface: three calculated discriminating properties for orientation of type I proteins. Biophys J 2007;93:1442-51. [PMID: 17526572 PMCID: PMC1948032 DOI: 10.1529/biophysj.107.105189] [Citation(s) in RCA: 88] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
36
Pertaya N, Marshall CB, DiPrinzio CL, Wilen L, Thomson ES, Wettlaufer JS, Davies PL, Braslavsky I. Fluorescence microscopy evidence for quasi-permanent attachment of antifreeze proteins to ice surfaces. Biophys J 2007;92:3663-73. [PMID: 17325008 PMCID: PMC1853139 DOI: 10.1529/biophysj.106.096297] [Citation(s) in RCA: 79] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
37
Li QZ, Yeh Y, Liu JJ, Feeney RE, Krishnan VV. A two-dimensional adsorption kinetic model for thermal hysteresis activity in antifreeze proteins. J Chem Phys 2006;124:204702. [PMID: 16774359 DOI: 10.1063/1.2186309] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
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