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Villar-Sepúlveda E, Champneys AR. conditions for Turing and wave instabilities in reaction-diffusion systems. J Math Biol 2023; 86:39. [PMID: 36708385 PMCID: PMC9884266 DOI: 10.1007/s00285-023-01870-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2022] [Revised: 11/21/2022] [Accepted: 01/07/2023] [Indexed: 01/29/2023]
Abstract
Necessary and sufficient conditions are provided for a diffusion-driven instability of a stable equilibrium of a reaction-diffusion system with n components and diagonal diffusion matrix. These can be either Turing or wave instabilities. Known necessary and sufficient conditions are reproduced for there to exist diffusion rates that cause a Turing bifurcation of a stable homogeneous state in the absence of diffusion. The method of proof here though, which is based on study of dispersion relations in the contrasting limits in which the wavenumber tends to zero and to [Formula: see text], gives a constructive method for choosing diffusion constants. The results are illustrated on a 3-component FitzHugh-Nagumo-like model proposed to study excitable wavetrains, and for two different coupled Brusselator systems with 4-components.
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Affiliation(s)
- Edgardo Villar-Sepúlveda
- Engineering Mathematics, University of Bristol, Ada Lovelace Building, Tankard’s Cl, University Walk, Bristol, Somerset BS8 1TW UK
| | - Alan R. Champneys
- Engineering Mathematics, University of Bristol, Ada Lovelace Building, Tankard’s Cl, University Walk, Bristol, Somerset BS8 1TW UK
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2
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Kubodera Y, Horisaka M, Kuze M, Suematsu NJ, Amemiya T, Steinbock O, Nakata S. Coexistence of oscillatory and reduced states on a spherical field controlled by electrical potential. CHAOS (WOODBURY, N.Y.) 2022; 32:073103. [PMID: 35907716 DOI: 10.1063/5.0097010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/24/2022] [Accepted: 06/06/2022] [Indexed: 06/15/2023]
Abstract
The Belousov-Zhabotinsky (BZ) reaction was investigated to elucidate features of oscillations depending on the applied electrical potential, E. A cation-exchange resin bead loaded with the catalyst of the BZ reaction was placed on a platinum plate as a working electrode and then E was applied. We found that global oscillations (GO) and a reduced state coexisted on the bead at a negative value of E and that the source point of GO changed depending on E. The thickness of the reduced state was determined by a yellow colored region which corresponded to the distribution of Br2. The present studies suggest that the distribution of the inhibitor, Br-, which is produced from Br2, plays an important role in the existence of the reduced state and GO, and the source point of GO.
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Affiliation(s)
- Yujin Kubodera
- Graduate School of Integrated Sciences for Life, Hiroshima University, Kagamiyama 1-3-1, Higashi-Hiroshima 739-8526, Japan
| | - Mari Horisaka
- Graduate School of Integrated Sciences for Life, Hiroshima University, Kagamiyama 1-3-1, Higashi-Hiroshima 739-8526, Japan
| | - Masakazu Kuze
- Organization for the Strategic Coordination of Research and Intellectual Properties, Meiji University, 4-21-1 Nakano, Nakano-ku, Tokyo 164-8525, Japan
| | - Nobuhiko J Suematsu
- Meiji Institute for Advanced Study of Mathematical Sciences (MIMS) and Graduate School of Advanced Mathematical Sciences, Meiji University, 4-21-1 Nakano, Nakano-ku, Tokyo 164-8525, Japan
| | - Takashi Amemiya
- Graduate School of Environment and Information Sciences, Yokohama National University (YNU), 79-7 Tokiwadai, Hodogaya-ku, Yokohama, Kanagawa 240-8501, Japan
| | - Oliver Steinbock
- Department of Chemistry and Biochemistry, Florida State University, Tallahassee, Florida 32306-4390, USA
| | - Satoshi Nakata
- Graduate School of Integrated Sciences for Life, Hiroshima University, Kagamiyama 1-3-1, Higashi-Hiroshima 739-8526, Japan
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Chen X, Xu Y, Zhou C, Lou K, Peng Y, Zhang HP, Wang W. Unraveling the physiochemical nature of colloidal motion waves among silver colloids. SCIENCE ADVANCES 2022; 8:eabn9130. [PMID: 35613263 PMCID: PMC9132452 DOI: 10.1126/sciadv.abn9130] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/06/2023]
Abstract
Traveling waves are common in biological and synthetic systems, including the recent discovery that silver (Ag) colloids form traveling motion waves in H2O2 and under light. Here, we show that this colloidal motion wave is a heterogeneous excitable system. The Ag colloids generate traveling chemical waves via reaction-diffusion, and either self-propel through self-diffusiophoresis ("ballistic waves") or are advected by diffusio-osmotic flows from gradients of neutral molecules ("swarming waves"). Key results include the experimental observation of traveling waves of OH- with pH-sensitive fluorescent dyes and a Rogers-McCulloch model that qualitatively and quantitatively reproduces the key features of colloidal waves. These results are a step forward in elucidating the Ag-H2O2-light oscillatory system at individual and collective levels. In addition, they pave the way for using colloidal waves either as a platform for studying nonlinear phenomena, or as a tool for colloidal transport and for information transmission in microrobot ensembles.
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Affiliation(s)
- Xi Chen
- Sauvage Laboratory for Smart Materials, School of Materials Science and Engineering, Harbin Institute of Technology (Shenzhen), Shenzhen 518055, China
| | - Yankai Xu
- School of Physics and Astronomy and Institute of Natural Sciences, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Chao Zhou
- Sauvage Laboratory for Smart Materials, School of Materials Science and Engineering, Harbin Institute of Technology (Shenzhen), Shenzhen 518055, China
| | - Kai Lou
- Guangzhou Kayja-Optics Technology Co. Ltd., Guangzhou 511458, China
| | - Yixin Peng
- Sauvage Laboratory for Smart Materials, School of Materials Science and Engineering, Harbin Institute of Technology (Shenzhen), Shenzhen 518055, China
| | - H. P. Zhang
- School of Physics and Astronomy and Institute of Natural Sciences, Shanghai Jiao Tong University, Shanghai 200240, China
- Corresponding author. (W.W.); (H.P.Z.)
| | - Wei Wang
- Sauvage Laboratory for Smart Materials, School of Materials Science and Engineering, Harbin Institute of Technology (Shenzhen), Shenzhen 518055, China
- Corresponding author. (W.W.); (H.P.Z.)
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Budroni MA, Torbensen K, Pantani OL, Ristori S, Rossi F, Abou-Hassan A. Microfluidic compartmentalization of diffusively coupled oscillators in multisomes induces a novel synchronization scenario. Chem Commun (Camb) 2020; 56:11771-11774. [DOI: 10.1039/d0cc05046f] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Multisome compartments encapsulating the Belousov–Zhabotinsky reaction produced by microfluidics arranged in 1D arrays showed a novel type of global synchronization.
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Affiliation(s)
| | - Kristian Torbensen
- Sorbonne Université
- CNRS UMR 8234
- PHysico-chimie des Electrolytes et Nanosystèmes InterfaciauX (PHENIX)
- Paris F-75005
- France
| | - Ottorino L. Pantani
- Department of Agrifood Production and Environmental Sciences
- University of Florence P.le delle Cascine 28
- Firenze 50144
- Italy
| | - Sandra Ristori
- Department of Chemistry & CSGI
- University of Florence
- Sesto Fiorentino 50019
- Italy
| | - Federico Rossi
- Department of Earth
- Environmental and Physical Sciences – DEEP Sciences – University of Siena
- Siena 53100
- Italy
| | - Ali Abou-Hassan
- Sorbonne Université
- CNRS UMR 8234
- PHysico-chimie des Electrolytes et Nanosystèmes InterfaciauX (PHENIX)
- Paris F-75005
- France
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Gaskins DK, Soohoo JS, Dolnik M, Epstein IR. Birth and Death of Invading Standing Waves in the BZ‐AOT Reaction‐diffusion System. Isr J Chem 2018. [DOI: 10.1002/ijch.201700142] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
| | - Jamie S. Soohoo
- Department of Chemistry, Brandeis University Waltham, MA USA 02453
| | - Milos Dolnik
- Department of Chemistry, Brandeis University Waltham, MA USA 02453
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Berenstein I, Carballido-Landeira J. Back and forth invasion in the interaction of Turing and Hopf domains in a reactive microemulsion system. RSC Adv 2016. [DOI: 10.1039/c6ra12797e] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Pattern formation is studied numerically for a reactive microemulsion when two parts of the system with different droplet fractions are initially put into contact.
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Affiliation(s)
- Igal Berenstein
- Université Libre de Bruxelles (ULB)
- Non-linear Physical Chemistry Unit
- Service de Chimie Physique et Biologie Theorique
- Brussels
- Belgium
| | - Jorge Carballido-Landeira
- Université Libre de Bruxelles (ULB)
- Non-linear Physical Chemistry Unit
- Service de Chimie Physique et Biologie Theorique
- Brussels
- Belgium
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Berenstein I, Beta C. Cross-diffusion in the two-variable Oregonator model. CHAOS (WOODBURY, N.Y.) 2013; 23:033119. [PMID: 24089955 DOI: 10.1063/1.4816937] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
We explore the effect of cross-diffusion on pattern formation in the two-variable Oregonator model of the Belousov-Zhabotinsky reaction. For high negative cross-diffusion of the activator (the activator being attracted towards regions of increased inhibitor concentration) we find, depending on the values of the parameters, Turing patterns, standing waves, oscillatory Turing patterns, and quasi-standing waves. For the inhibitor, we find that positive cross-diffusion (the inhibitor being repelled by increasing concentrations of the activator) can induce Turing patterns, jumping waves and spatially modulated bulk oscillations. We qualitatively explain the formation of these patterns. With one model we can explain Turing patterns, standing waves and jumping waves, which previously was done with three different models.
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Affiliation(s)
- Igal Berenstein
- Institute of Physics and Astronomy, University of Potsdam, Karl-Liebknecht-Str. 24/25, 14476 Potsdam, Germany
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Berenstein I, Beta C. Spatiotemporal chaos arising from standing waves in a reaction-diffusion system with cross-diffusion. J Chem Phys 2012; 136:034903. [DOI: 10.1063/1.3676577] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Vanag VK. Dissipative structures in systems of diffusion-bonded chemical nano- and micro oscillators. RUSS J GEN CHEM+ 2011. [DOI: 10.1134/s107036321101035x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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10
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Carballido-Landeira J, Taboada P, Muñuzuri AP. Nanoscale changes induce microscale effects in Turing patterns. Phys Chem Chem Phys 2011; 13:4596-9. [DOI: 10.1039/c0cp02362k] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Cuiñas D, Berenstein I, Carballido-Landeira J, Muñuzuri AP. Transition from traveling to standing waves as a function of frequency in a reaction-diffusion system. J Chem Phys 2008; 128:244907. [DOI: 10.1063/1.2946697] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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12
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Vanag VK, Epstein IR. Design and control of patterns in reaction-diffusion systems. CHAOS (WOODBURY, N.Y.) 2008; 18:026107. [PMID: 18601509 DOI: 10.1063/1.2900555] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
We discuss the design of reaction-diffusion systems that display a variety of spatiotemporal patterns. We also consider how these patterns may be controlled by external perturbation, typically using photochemistry or temperature. Systems treated include the Belousov-Zhabotinsky (BZ) reaction, the chlorite-iodide-malonic acid and chlorine dioxide-malonic acid-iodine reactions, and the BZ-AOT system, i.e., the BZ reaction in a water-in-oil reverse microemulsion stabilized by the surfactant sodium bis(2-ethylhexyl) sulfosuccinate (AOT).
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Affiliation(s)
- Vladimir K Vanag
- Department of Chemistry and Volen Center for Complex Systems, Brandeis University, Waltham, Massachusetts 02454-9110, USA
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Qiao L, Kevrekidis IG, Punckt C, Rotermund HH. Geometry-induced pulse instability in microdesigned catalysts: the effect of boundary curvature. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2006; 73:036217. [PMID: 16605641 DOI: 10.1103/physreve.73.036217] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/23/2005] [Indexed: 05/08/2023]
Abstract
We explore the effect of boundary curvature on the instability of reactive pulses in the catalytic oxidation of on microdesigned Pt catalysts. Using ring-shaped domains of various radii, we find that the pulses disappear (decollate from the inert boundary) at a turning point bifurcation, and we trace this boundary in both physical and geometrical parameter space. These computations corroborate experimental observations of pulse decollation.
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Affiliation(s)
- L Qiao
- Department of Chemical Engineering, Princeton University, Princeton, NJ 08544, USA
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Epstein IR, Vanag VK. Complex patterns in reactive microemulsions: self-organized nanostructures? CHAOS (WOODBURY, N.Y.) 2005; 15:047510. [PMID: 16396603 DOI: 10.1063/1.2102447] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
In a reverse microemulsion consisting of water, oil (octane), an anionic surfactant [aerosol OT (AOT)], and the reactants of the oscillating Belousov-Zhabotinsky (BZ) reaction, a variety of complex spatiotemporal patterns appear. These include traveling and standing waves, spirals that move either toward or away from their centers, spatiotemporal chaos, Turing patterns, segmented waves, and localized structures, both stationary and oscillatory. The system consists of nanometer-sized droplets of water containing the BZ reactants surrounded by a monolayer of AOT, swimming in a sea of oil, through which nonpolar BZ intermediates can diffuse rapidly. We present experimental and computational results on this fascinating system and comment on possible future directions for research.
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Affiliation(s)
- Irving R Epstein
- Department of Chemistry and Volen Center for Complex Systems, Brandeis University MS 015, Waltham, Massachusetts 02454-9110, USA.
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