Hydrogen-bonded structures of the 1:1 and 1:2 compounds of chloranilic acid with pyrrolidin-2-one and piperidin-2-one

Various Stacking Patterns of Two-Dimensional Molecular Assemblies in Hydrogen-Bonded Cocrystals: Insight on Competitive Intermolecular Interactions and Control of Stacking Patterns

We first demonstrate the rational control over the stacking patterns in two-dimensional (2D) molecular assemblies using chemical modification. A target system is a hydrogen-bonded cocrystal composed of 2-pyrrolidone (Py) and chloranilic acid (CA) with 2:1 composition ( PyCA ). X-ray crystallography revealed that various weak intersheet interactions give rise to a variety of metastable overlapping patterns comprised of the 2D assemblies mainly formed via hydrogen bonds, affording reversible and irreversible structural phase transitions. We successfully prepared cocrystals of Py and anilic acids bearing different halogens, in which 2D assemblies isostructural with those observed in PyCA exhibit various overlapping patterns. The order of stability for each overlapping pattern estimated using theoretical calculations of the intermolecular interactions did not completely coincide with those indicated by our experimental results, which can be explained by considering the entropic effect, i.e., the molecular motion of Py as detected using nuclear quadrupole resonance spectroscopy.

Quantitative analysis of intermolecular interactions in cocrystals and a pair of polymorphous cocrystal hydrates from 1,4-dihydroquinoxaline-2,3-dione and 1H-benzo[d]imidazol-2(3H)-one with 2,5-dihydroxy-1,4-benzoquinones: a combined X-ray structural and theoretical analysis

Study and quantification of intermolecular interactions in five cocrystals and cocrystals hydrates by PIXEL, DFT, Hirshfeld surface and QTAIM calculations.

Crystal structures of two hydrogen-bonded compounds of chloranilic acid-ethyl-eneurea (1/1) and chloranilic acid-hydantoin (1/2)

The structures of the hydrogen-bonded 1:1 co-crystal of chloranilic acid (systematic name: 2,5-di-chloro-3,6-dihy-droxy-1,4-benzo-quinone) with ethyl-eneurea (systematic name: imidazolidin-2-one), C6H2Cl2O4·C3H6N2O, (I), and the 1:2 co-crystal of chloranilic acid with hydantoin (systematic name: imidazolidine-2,4-dione), C6H2Cl2O4·2C3H4N2O2, (II), have been determined at 180 K. In the crystals of both compounds, the base mol-ecules are in the lactam form and no acid-base inter-action involving H-atom transfer is observed. The asymmetric unit of (I) consists of two independent half-mol-ecules of chloranilic acid, with each of the acid mol-ecules lying about an inversion centre, and one ethyl-eneurea mol-ecule. The asymmetric unit of (II) consists of one half-mol-ecule of chloranilic acid, which lies about an inversion centre, and one hydantoin mol-ecule. In the crystal of (I), the acid and base mol-ecules are linked via O-H⋯O and N-H⋯O hydrogen bonds, forming an undulating sheet structure parallel to the ab plane. In (II), the base mol-ecules form an inversion dimer via a pair of N-H⋯O hydrogen bonds, and the base dimers are further linked through another N-H⋯O hydrogen bond into a layer structure parallel to (01). The acid mol-ecule and the base mol-ecule are linked via an O-H⋯O hydrogen bond.

Crystal structures of morpholinium hydrogen bromanilate at 130, 145 and 180 K

Crystal structures of the title compound (systematic name: morpholin-4-ium 2,5-di-bromo-4-hy-droxy-3,6-dioxo-cyclo-hexa-1,4-dien-1-olate), C4H10NO(+)·C6HBr2O4 (-), were determined at three temperatures, viz. 130, 145 and 180 K. The asymmetric unit comprises one morpholinium cation and two halves of crystallographically independent bromanilate monoanions, which are located on inversion centres. The conformations of the two independent bromanilate anions are different from each other with respect to the O-H orientation. In the crystal, the two different anions are linked alternately into a chain along [211] through a short O-H⋯O hydrogen bond, in which the H atom is disordered over two positions. The refined site-occupancy ratios, which are almost constant in the temperature range studied, are 0.49 (3):0.51 (3), 0.52 (3):0.48 (3) and 0.50 (3):0.50 (3), respectively, at 130, 145 and 180 K, and no significant difference in the mol-ecular geometry and the mol-ecular packing is observed at the three temperatures. The morpholinium cation links adjacent chains of anions via N-H⋯O hydrogen bonds, forming a sheet structure parallel to (-111).

Bis(4-methoxy-3,4-dihydroquinazolin-1-ium) chloranilate

In the title compound [systematic name: bis­(4-meth­oxy-3,4-di­hydro­quinazolin-1-ium) 2,5-di­chloro-3,6-dioxo­cyclo­hexa-1,4-diene-1,4-diolate], 2C₉H₁₁N₂O⁺·C₆Cl₂O₄²⁻, the chloranil­ate anion lies about an inversion center. The 4-meth­oxy-3,4-di­hydro­quinazolin-1-ium cations are linked on both sides of the anion via bifurcated N—H⋯(O,O) and weak C—H⋯O hydrogen bonds, giving a centrosymmetric 2:1 aggregate. The 2:1 aggregates are linked by another N—H⋯O hydrogen bond into a tape running along [1-10]. The tapes are further linked by a C—H⋯O hydrogen bond into a layer parallel to the ab plane.

Temperature dependence of one-dimensional hydrogen bonding in morpholinium hydrogen chloranilate studied by 35Cl nuclear quadrupole resonance and multi-temperature X-ray diffraction

The temperature dependence of (35)Cl NQR frequencies and the spin-lattice relaxation times T(1) has been measured in the wide temperature range of 4.2-420 K for morpholinium hydrogen chloranilate in which a one-dimensional O-HO hydrogen-bonded molecular chain of hydrogen chloranilate ions is formed. An anomalous temperature dependence of the NQR frequencies was analyzed to deduce a drastic temperature variation of the electronic state of the hydrogen-bonded molecular chain. The hydrogen atom distribution in the OHO hydrogen bond is discussed from the results of NQR as well as multi-temperature X-ray diffraction. Above ca. 330 K, the T(1) showed a steep decrease with an activation energy of ca. 70 kJ mol(-1) and with an isotope ratio (37)Cl T(1)/(35)Cl T(1) = 0.97 ± 0.2. The orientational change of the z axis of electric field gradient tensor in conjunction with the hydrogen transfer between adjacent hydrogen chloranilate ions is suggested as a possible relaxation mechanism.