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Morris C, Andreetto P, Banci L, Bonvin AMJJ, Chojnowski G, Cano LD, Carazo JM, Conesa P, Daenke S, Damaskos G, Giachetti A, Haley NEC, Hekkelman ML, Heuser P, Joosten RP, Kouřil D, Křenek A, Kulhánek T, Lamzin VS, Nadzirin N, Perrakis A, Rosato A, Sanderson F, Segura J, Schaarschmidt J, Sobolev E, Traldi S, Trellet ME, Velankar S, Verlato M, Winn M. West-Life: A Virtual Research Environment for structural biology. JOURNAL OF STRUCTURAL BIOLOGY-X 2019; 1:100006. [PMID: 32647812 PMCID: PMC7337051 DOI: 10.1016/j.yjsbx.2019.100006] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
Data processing and data management services for structural biology. Enhancements to existing web services for structure solution and analysis. New pipelines to link these services into more complex higher-level workflows. New data management facilities. Making the benefits of European e-Infrastructures more accessible to structural biologists.
The West-Life project (https://about.west-life.eu/) is a Horizon 2020 project funded by the European Commission to provide data processing and data management services for the international community of structural biologists, and in particular to support integrative experimental approaches within the field of structural biology. It has developed enhancements to existing web services for structure solution and analysis, created new pipelines to link these services into more complex higher-level workflows, and added new data management facilities. Through this work it has striven to make the benefits of European e-Infrastructures more accessible to life-science researchers in general and structural biologists in particular.
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Affiliation(s)
| | | | - Lucia Banci
- Magnetic Resonance Center, University of Florence, Italy
| | | | - Grzegorz Chojnowski
- European Molecular Biology Laboratory, c/o DESY, Notkestr. 85, 22607 Hamburg, Germany
| | | | | | | | | | - George Damaskos
- Division of Biochemistry, Netherlands Cancer Institute, Amsterdam, The Netherlands
| | | | | | - Maarten L Hekkelman
- Division of Biochemistry, Netherlands Cancer Institute, Amsterdam, The Netherlands
| | - Philipp Heuser
- European Molecular Biology Laboratory, c/o DESY, Notkestr. 85, 22607 Hamburg, Germany
| | - Robbie P Joosten
- Division of Biochemistry, Netherlands Cancer Institute, Amsterdam, The Netherlands
| | | | | | | | - Victor S Lamzin
- European Molecular Biology Laboratory, c/o DESY, Notkestr. 85, 22607 Hamburg, Germany
| | - Nurul Nadzirin
- European Molecular Biology Laboratory (EMBL), European Bioinformatics Institute (EMBL-EBI), Cambridge, UK
| | - Anastassis Perrakis
- Division of Biochemistry, Netherlands Cancer Institute, Amsterdam, The Netherlands
| | - Antonio Rosato
- Magnetic Resonance Center, University of Florence, Italy
| | | | | | | | - Egor Sobolev
- European Molecular Biology Laboratory, c/o DESY, Notkestr. 85, 22607 Hamburg, Germany
| | | | | | - Sameer Velankar
- European Molecular Biology Laboratory (EMBL), European Bioinformatics Institute (EMBL-EBI), Cambridge, UK
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