1
|
Siriwong S, Tanthanuch W, Srisamut D, Chantarakhon C, Kamkajon K, Thumanu K. Performance Evaluation of Focal Plane Array (FPA)-FTIR and Synchrotron Radiation (SR)-FTIR Microspectroscopy to Classify Rice Components. MICROSCOPY AND MICROANALYSIS : THE OFFICIAL JOURNAL OF MICROSCOPY SOCIETY OF AMERICA, MICROBEAM ANALYSIS SOCIETY, MICROSCOPICAL SOCIETY OF CANADA 2022; 28:1-10. [PMID: 36062386 DOI: 10.1017/s1431927622012454] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
The development of biochemical analysis techniques to study heterogeneous biological samples is increasing. These techniques include synchrotron radiation Fourier transform infrared (SR-FTIR) microspectroscopy. This method has been applied to analyze biological tissue with multivariate statistical analysis to classify the components revealed by the spectral data. This study aims to compare the efficiencies of SR-FTIR microspectroscopy and focal plane array (FPA)-FTIR microspectroscopy when classifying rice tissue components. Spectral data were acquired for mapping the same sample areas from both techniques. Principal component analysis and cluster imaging were used to investigate the biochemical variations of the tissue types. The classification was based on the functional groups of pectin, protein, and polysaccharide. Four layers from SR-FTIR microspectroscopy including pericarp, aleurone layer, sub-aleurone layer, and endosperm were classified using cluster imaging, while FPA-FTIR microspectroscopy could classify only three layers of pericarp, aleurone layer, and endosperm. Moreover, SR-FTIR microspectroscopy increased the image contrast of the biochemical distribution in rice tissue more efficiently than FPA-FTIR microspectroscopy. We have demonstrated the capability of the high-resolution synchrotron technique and its ability to clarify small structures in rice tissue. The use of this technique might increase in future studies of tissue characterization.
Collapse
Affiliation(s)
- Supatcharee Siriwong
- Research Facility Department, Synchrotron Light Research Institute (Public Organization), Mueang District, Nakhon Ratchasima, 30000, Thailand
| | - Waraporn Tanthanuch
- Research Facility Department, Synchrotron Light Research Institute (Public Organization), Mueang District, Nakhon Ratchasima, 30000, Thailand
| | - Duangjai Srisamut
- Research Facility Department, Synchrotron Light Research Institute (Public Organization), Mueang District, Nakhon Ratchasima, 30000, Thailand
| | - Chulalak Chantarakhon
- Research Facility Department, Synchrotron Light Research Institute (Public Organization), Mueang District, Nakhon Ratchasima, 30000, Thailand
| | - Kanokwan Kamkajon
- Center of Calcium and Bone Research (COCAB), Department of Physiology, Faculty of Science, Mahidol University, Bangkok, 10400, Thailand
| | - Kanjana Thumanu
- Research Facility Department, Synchrotron Light Research Institute (Public Organization), Mueang District, Nakhon Ratchasima, 30000, Thailand
| |
Collapse
|
2
|
Bazin D, Bouderlique E, Tang E, Daudon M, Haymann JP, Frochot V, Letavernier E, Van de Perre E, Williams JC, Lingeman JE, Borondics F. Using mid infrared to perform investigations beyond the diffraction limits of microcristalline pathologies: advantages and limitation of Optical PhotoThermal IR spectroscopy. CR CHIM 2022. [DOI: 10.5802/crchim.196] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
|
3
|
Ma X, Pavlidis G, Dillon E, Beltran V, Schwartz JJ, Thoury M, Borondics F, Sandt C, Kjoller K, Berrie BH, Centrone A. Micro to Nano: Multiscale IR Analyses Reveal Zinc Soap Heterogeneity in a 19th-Century Painting by Corot. Anal Chem 2022; 94:3103-3110. [PMID: 35138807 DOI: 10.1021/acs.analchem.1c04182] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
Formation and aggregation of metal carboxylates (metal soaps) can degrade the appearance and integrity of oil paints, challenging efforts to conserve painted works of art. Endeavors to understand the root cause of metal soap formation have been hampered by the limited spatial resolution of Fourier transform infrared microscopy (μ-FTIR). We overcome this limitation using optical photothermal infrared spectroscopy (O-PTIR) and photothermal-induced resonance (PTIR), two novel methods that provide IR spectra with ≈500 and ≈10 nm spatial resolutions, respectively. The distribution of chemical phases in thin sections from the top layer of a 19th-century painting is investigated at multiple scales (μ-FTIR ≈ 102 μm3, O-PTIR ≈ 10-1 μm3, PTIR ≈ 10-5 μm3). The paint samples analyzed here are found to be mixtures of pigments (cobalt green, lead white), cured oil, and a rich array of intermixed, small (often ≪ 0.1 μm3) zinc soap domains. We identify Zn stearate and Zn oleate crystalline soaps with characteristic narrow IR peaks (≈1530-1558 cm-1) and a heterogeneous, disordered, water-permeable, tetrahedral zinc soap phase, with a characteristic broad peak centered at ≈1596 cm-1. We show that the high signal-to-noise ratio and spatial resolution afforded by O-PTIR are ideal for identifying phase-separated (or locally concentrated) species with low average concentration, while PTIR provides an unprecedented nanoscale view of distributions and associations of species in paint. This newly accessible nanocompositional information will advance our knowledge of chemical processes in oil paint and will stimulate new art conservation practices.
Collapse
Affiliation(s)
- Xiao Ma
- Institute for the Conservation of Cultural Heritage, Shanghai University, No. 333 Nanchen Road, Shanghai 200444, China
| | - Georges Pavlidis
- Nanoscale Device Characterization Division, Physical Measurement Laboratory, National Institute of Standards and Technology, 100 Bureau Drive, Gaithersburg, Maryland 20899, United States
| | - Eoghan Dillon
- Photothermal Spectroscopy Corporation, 325 Chapala Street, Santa Barbara, California 93101, United States
| | - Victoria Beltran
- IPANEMA, CNRS, Ministère de la Culture et de la Communication Université de Versailles Saint-Quentin-en-Yvelines, USR 3461, Université Paris-Saclay, 91128 Gif-sur-Yvette, France
| | - Jeffrey J Schwartz
- Nanoscale Device Characterization Division, Physical Measurement Laboratory, National Institute of Standards and Technology, 100 Bureau Drive, Gaithersburg, Maryland 20899, United States.,Institute for Research in Electronics and Applied Physics, University of Maryland, College Park, Maryland 20742, United States
| | - Mathieu Thoury
- IPANEMA, CNRS, Ministère de la Culture et de la Communication Université de Versailles Saint-Quentin-en-Yvelines, USR 3461, Université Paris-Saclay, 91128 Gif-sur-Yvette, France
| | - Ferenc Borondics
- Synchrotron SOLEIL, L'Orme des Merisiers Saint-Aubin BP 48, 91192 Gif-sur-Yvette Cedex, France
| | - Christophe Sandt
- Synchrotron SOLEIL, L'Orme des Merisiers Saint-Aubin BP 48, 91192 Gif-sur-Yvette Cedex, France
| | - Kevin Kjoller
- Photothermal Spectroscopy Corporation, 325 Chapala Street, Santa Barbara, California 93101, United States
| | - Barbara H Berrie
- Scientific Research Department, National Gallery of Art, 2000B South Club Drive, Landover, Maryland 20785, United States
| | - Andrea Centrone
- Nanoscale Device Characterization Division, Physical Measurement Laboratory, National Institute of Standards and Technology, 100 Bureau Drive, Gaithersburg, Maryland 20899, United States
| |
Collapse
|
4
|
Beć KB, Grabska J, Huck CW. Biomolecular and bioanalytical applications of infrared spectroscopy - A review. Anal Chim Acta 2020; 1133:150-177. [PMID: 32993867 DOI: 10.1016/j.aca.2020.04.015] [Citation(s) in RCA: 70] [Impact Index Per Article: 17.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2019] [Revised: 04/05/2020] [Accepted: 04/06/2020] [Indexed: 12/11/2022]
Abstract
Infrared (IR; or mid-infrared, MIR; 4000-400 cm-1; 2500-25,000 nm) spectroscopy has become one of the most powerful and versatile tools at the disposal of modern bioscience. Because of its high molecular specificity, applicability to wide variety of samples, rapid measurement and non-invasivity, IR spectroscopy forms a potent approach to elucidate qualitative and quantitative information from various kinds of biological material. For these reasons, it became an established bioanalytical technique with diverse applications. This work aims to be a comprehensive and critical review of the recent accomplishments in the field of biomolecular and bioanalytical IR spectroscopy. That progress is presented on a wider background, with fundamental characteristics, the basic principles of the technique outlined, and its scientific capability directly compared with other methods being used in similar fields (e.g. near-infrared, Raman, fluorescence). The article aims to present a complete examination of the topic, as it touches the background phenomena, instrumentation, spectra processing and data analytical methods, spectra interpretation and related information. To suit this goal, the article includes a tutorial information essential to obtain a thorough perspective of bio-related applications of the reviewed methodologies. The importance of the fundamental factors to the final performance and applicability of IR spectroscopy in various areas of bioscience is explained. This information is interpreted in critical way, with aim to gain deep understanding why IR spectroscopy finds extraordinarily intensive use in this remarkably diverse and dynamic field of research and utility. The major focus is placed on the diversity of the applications in which IR biospectroscopy has been established so far and those onto which it is expanding nowadays. This includes qualitative and quantitative analytical spectroscopy, spectral imaging, medical diagnosis, monitoring of biophysical processes, and studies of physicochemical properties and dynamics of biomolecules. The application potential of IR spectroscopy in light of the current accomplishments and the future prospects is critically evaluated and its significance in the progress of bioscience is comprehensively presented.
Collapse
Affiliation(s)
- Krzysztof B Beć
- Institute of Analytical Chemistry and Radiochemistry, Center for Chemistry and Biomedicine, University of Innsbruck, Innrain 80/82, A-6020, Innsbruck, Austria.
| | - Justyna Grabska
- Institute of Analytical Chemistry and Radiochemistry, Center for Chemistry and Biomedicine, University of Innsbruck, Innrain 80/82, A-6020, Innsbruck, Austria
| | - Christian W Huck
- Institute of Analytical Chemistry and Radiochemistry, Center for Chemistry and Biomedicine, University of Innsbruck, Innrain 80/82, A-6020, Innsbruck, Austria.
| |
Collapse
|
5
|
Riaz T, Zeeshan R, Zarif F, Ilyas K, Muhammad N, Safi SZ, Rahim A, Rizvi SAA, Rehman IU. FTIR analysis of natural and synthetic collagen. APPLIED SPECTROSCOPY REVIEWS 2018; 53:703-746. [DOI: 10.1080/05704928.2018.1426595] [Citation(s) in RCA: 242] [Impact Index Per Article: 40.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/16/2023]
Affiliation(s)
- Tehseen Riaz
- Interdisciplinary Research Centre in Biomedical Materials (IRCBM), COMSATS Institute of Information Technology, Lahore, Pakistan
| | - Rabia Zeeshan
- Interdisciplinary Research Centre in Biomedical Materials (IRCBM), COMSATS Institute of Information Technology, Lahore, Pakistan
| | - Faiza Zarif
- Interdisciplinary Research Centre in Biomedical Materials (IRCBM), COMSATS Institute of Information Technology, Lahore, Pakistan
| | - Kanwal Ilyas
- Interdisciplinary Research Centre in Biomedical Materials (IRCBM), COMSATS Institute of Information Technology, Lahore, Pakistan
| | - Nawshad Muhammad
- Interdisciplinary Research Centre in Biomedical Materials (IRCBM), COMSATS Institute of Information Technology, Lahore, Pakistan
| | - Sher Zaman Safi
- Interdisciplinary Research Centre in Biomedical Materials (IRCBM), COMSATS Institute of Information Technology, Lahore, Pakistan
| | - Abdur Rahim
- Interdisciplinary Research Centre in Biomedical Materials (IRCBM), COMSATS Institute of Information Technology, Lahore, Pakistan
| | - Syed A. A. Rizvi
- Department of Pharmaceutical Sciences, College of Pharmacy, Nova Southeastern University, Fort Lauderdale, Florida, USA
| | - Ihtesham Ur Rehman
- Department of Materials Science & Engineering, Kroto Research Institute, University of Sheffield, Sheffield, UK
| |
Collapse
|
6
|
Bobroff V, Chen HH, Delugin M, Javerzat S, Petibois C. Quantitative IR microscopy and spectromics open the way to 3D digital pathology. JOURNAL OF BIOPHOTONICS 2017; 10:598-606. [PMID: 27248698 DOI: 10.1002/jbio.201600051] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/23/2016] [Revised: 04/27/2016] [Accepted: 04/27/2016] [Indexed: 06/05/2023]
Abstract
Currently, only mass-spectrometry (MS) microscopy brings a quantitative analysis of chemical contents of tissue samples in 3D. Here, the reconstruction of a 3D quantitative chemical images of a biological tissue by FTIR spectro-microscopy is reported. An automated curve-fitting method is developed to extract all intense absorption bands constituting IR spectra. This innovation benefits from three critical features: (1) the correction of raw IR spectra to make them quantitatively comparable; (2) the automated and iterative data treatment allowing to transfer the IR-absorption spectrum into a IR-band spectrum; (3) the reconstruction of an 3D IR-band matrix (x, y, z for voxel position and a 4th dimension with all IR-band parameters). Spectromics, which is a new method for exploiting spectral data for tissue metadata reconstruction, is proposed to further translate the related chemical information in 3D, as biochemical and anatomical tissue parameters. An example is given with oxidative stress distribution and the reconstruction of blood vessels in tissues. The requirements of IR microscopy instrumentation to propose 3D digital histology as a clinical routine technology is briefly discussed.
Collapse
Affiliation(s)
- Vladimir Bobroff
- University of Bordeaux, Inserm U1029 LAMC, Allée Geoffroy Saint Hillaire, Bat B2, F33600, Pessac, France
| | - Hsiang-Hsin Chen
- University of Bordeaux, Inserm U1029 LAMC, Allée Geoffroy Saint Hillaire, Bat B2, F33600, Pessac, France
| | - Maylis Delugin
- University of Bordeaux, Inserm U1029 LAMC, Allée Geoffroy Saint Hillaire, Bat B2, F33600, Pessac, France
| | - Sophie Javerzat
- University of Bordeaux, Inserm U1029 LAMC, Allée Geoffroy Saint Hillaire, Bat B2, F33600, Pessac, France
| | - Cyril Petibois
- University of Bordeaux, Inserm U1029 LAMC, Allée Geoffroy Saint Hillaire, Bat B2, F33600, Pessac, France
| |
Collapse
|
7
|
Fu Y, Liu S, Cui SJ, Kou XX, Wang XD, Liu XM, Sun Y, Wang GN, Liu Y, Zhou YH. Surface Chemistry of Nanoscale Mineralized Collagen Regulates Periodontal Ligament Stem Cell Fate. ACS APPLIED MATERIALS & INTERFACES 2016; 8:15958-15966. [PMID: 27280804 DOI: 10.1021/acsami.6b04951] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
The interplay between stem cells and their extracellular microenvironment is of critical importance to the stem cell-based therapeutics in regenerative medicine. Mineralized collagen is the main component of bone extracellular matrix, but the effect of interfacial properties of mineralized collagen on subsequent cellular behaviors is unclear. This study examined the role of surface chemistry of nanoscale mineralized collagen on human periodontal ligament stem cell (hPDLSC) fate decisions. The intrafibrillarly mineralized collagen (IMC), fabricated by a biomimetic bottom-up approach, showed a bonelike hierarchy with nanohydroxyapatites (HAs) periodically embedded within fibrils. The infrared spectrum of the IMC showed the presence of phosphate, carbonate, amide I and II bands; and infrared mapping displayed uniform and higher spatial distribution of mineralization in the IMC. However, the distribution of the phosphate group differed far from that of the amide I group in the extrafibrillarly mineralized collagen (EMC), in which flowerlike HA clusters randomly depositing around the surface of the fibrils. Moreover, a large quantity of extrafibrillar HAs covered up the C═O stretch and N-H in-plane bend, resulting in substantial reduction of amide I and II bands. Cell experiments demonstrated that the hPDLSCs seeded on the IMC exhibited a highly branched, osteoblast-like polygonal shape with extended pseudopodia and thick stress fiber formation; while cells on the EMC displayed a spindle shape with less branch points and thin actin fibril formation. Furthermore, the biocompatibility of EMC was much lower than that of IMC. Interestingly, even without osteogenic induction, mRNA levels of major osteogenic differentiation genes were highly expressed in the IMC during cultivation time. These data suggest that the IMC with a similar nanotopography and surface chemistry to natural mineralized collagen directs hPDLSCs toward osteoblast differentiation, providing a promising scaffold in bone tissue regeneration.
Collapse
Affiliation(s)
- Yu Fu
- Center for Craniofacial Stem Cell Research and Regeneration, Department of Orthodontics, Peking University School and Hospital of Stomatology, National Engineering Laboratory for Digital and Material Technology of Stomatology, Beijing Key Laboratory of Digital Stomatology , Beijing 100081, P. R. China
| | - Shuai Liu
- Center for Craniofacial Stem Cell Research and Regeneration, Department of Orthodontics, Peking University School and Hospital of Stomatology, National Engineering Laboratory for Digital and Material Technology of Stomatology, Beijing Key Laboratory of Digital Stomatology , Beijing 100081, P. R. China
| | - Sheng-Jie Cui
- Center for Craniofacial Stem Cell Research and Regeneration, Department of Orthodontics, Peking University School and Hospital of Stomatology, National Engineering Laboratory for Digital and Material Technology of Stomatology, Beijing Key Laboratory of Digital Stomatology , Beijing 100081, P. R. China
| | - Xiao-Xing Kou
- Center for Craniofacial Stem Cell Research and Regeneration, Department of Orthodontics, Peking University School and Hospital of Stomatology, National Engineering Laboratory for Digital and Material Technology of Stomatology, Beijing Key Laboratory of Digital Stomatology , Beijing 100081, P. R. China
| | - Xue-Dong Wang
- Center for Craniofacial Stem Cell Research and Regeneration, Department of Orthodontics, Peking University School and Hospital of Stomatology, National Engineering Laboratory for Digital and Material Technology of Stomatology, Beijing Key Laboratory of Digital Stomatology , Beijing 100081, P. R. China
| | - Xiao-Mo Liu
- Center for Craniofacial Stem Cell Research and Regeneration, Department of Orthodontics, Peking University School and Hospital of Stomatology, National Engineering Laboratory for Digital and Material Technology of Stomatology, Beijing Key Laboratory of Digital Stomatology , Beijing 100081, P. R. China
| | - Yue Sun
- Center for Craniofacial Stem Cell Research and Regeneration, Department of Orthodontics, Peking University School and Hospital of Stomatology, National Engineering Laboratory for Digital and Material Technology of Stomatology, Beijing Key Laboratory of Digital Stomatology , Beijing 100081, P. R. China
| | - Gao-Nan Wang
- Center for Craniofacial Stem Cell Research and Regeneration, Department of Orthodontics, Peking University School and Hospital of Stomatology, National Engineering Laboratory for Digital and Material Technology of Stomatology, Beijing Key Laboratory of Digital Stomatology , Beijing 100081, P. R. China
| | - Yan Liu
- Center for Craniofacial Stem Cell Research and Regeneration, Department of Orthodontics, Peking University School and Hospital of Stomatology, National Engineering Laboratory for Digital and Material Technology of Stomatology, Beijing Key Laboratory of Digital Stomatology , Beijing 100081, P. R. China
| | - Yan-Heng Zhou
- Center for Craniofacial Stem Cell Research and Regeneration, Department of Orthodontics, Peking University School and Hospital of Stomatology, National Engineering Laboratory for Digital and Material Technology of Stomatology, Beijing Key Laboratory of Digital Stomatology , Beijing 100081, P. R. China
| |
Collapse
|
8
|
Wu L, Yin X, Guo Z, Tong Y, Feng J, York P, Xiao T, Chen M, Gu J, Zhang J. Hydration induced material transfer in membranes of osmotic pump tablets measured by synchrotron radiation based FTIR. Eur J Pharm Sci 2016; 84:132-8. [DOI: 10.1016/j.ejps.2016.01.020] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2015] [Revised: 12/31/2015] [Accepted: 01/19/2016] [Indexed: 10/22/2022]
|
9
|
Clemens G, Hands JR, Dorling KM, Baker MJ. Vibrational spectroscopic methods for cytology and cellular research. Analyst 2015; 139:4411-44. [PMID: 25028699 DOI: 10.1039/c4an00636d] [Citation(s) in RCA: 65] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
The use of vibrational spectroscopy, FTIR and Raman, for cytology and cellular research has the potential to revolutionise the approach to cellular analysis. Vibrational spectroscopy is non-destructive, simple to operate and provides direct information. Importantly it does not require expensive exogenous labels that may affect the chemistry of the cell under analysis. In addition, the advent of spectroscopic microscopes provides the ability to image cells and acquire spectra with a subcellular resolution. This introductory review focuses on recent developments within this fast paced field and highlights potential for the future use of FTIR and Raman spectroscopy. We particularly focus on the development of live cell research and the new technologies and methodologies that have enabled this.
Collapse
Affiliation(s)
- Graeme Clemens
- Centre for Materials Science, Division of Chemistry, University of Central Lancashire, Preston, Lancashire PR1 2HE, UK.
| | | | | | | |
Collapse
|
10
|
Chwiej J, Skoczen A, Matusiak K, Janeczko K, Patulska A, Sandt C, Simon R, Ciarach M, Setkowicz Z. The influence of the ketogenic diet on the elemental and biochemical compositions of the hippocampal formation. Epilepsy Behav 2015; 49:40-6. [PMID: 25986320 DOI: 10.1016/j.yebeh.2015.04.042] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 04/08/2015] [Accepted: 04/19/2015] [Indexed: 10/23/2022]
Abstract
A growing body of evidence demonstrates that dietary therapies, mainly the ketogenic diet, may be highly effective in the reduction of epileptic seizures. All of them share the common characteristic of restricting carbohydrate intake to shift the predominant caloric source of the diet to fat. Catabolism of fats results in the production of ketone bodies which become alternate energy substrates to glucose. Although many mechanisms by which ketone bodies yield its anticonvulsant effect are proposed, the relationships between the brain metabolism of the ketone bodies and their neuroprotective and antiepileptogenic action still remain to be discerned. In the study, X-ray fluorescence microscopy and FTIR microspectroscopy were used to follow ketogenic diet-induced changes in the elemental and biochemical compositions of rat hippocampal formation tissue. The use of synchrotron sources of X-rays and infrared allowed us to examine changes in the accumulation and distribution of selected elements (P, S, K, Ca, Fe, Cu, Zn, and Se) and biomolecules (proteins, lipids, ketone bodies, etc.) with the micrometer spatial resolution. The comparison of rats fed with the ketogenic diet and rats fed with the standard laboratory diet showed changes in the hippocampal accumulation of P, K, Ca, and Zn. The relations obtained for Ca (increased level in CA3, DG, and its internal area) and Zn (decreased areal density in CA3 and DG) were analogous to those that we previously observed for rats in the acute phase of pilocarpine-induced seizures. Biochemical analysis of tissues taken from ketogenic diet-fed rats demonstrated increased intensity of absorption band occurring at 1740 cm(-1), which was probably the result of elevated accumulation of ketone bodies. Moreover, higher absolute and relative (3012 cm(-1)/2924 cm(-1), 3012 cm(-1)/lipid massif, and 3012 cm(-1)/amide I) intensity of the 3012-cm(-1) band resulting from increased unsaturated fatty acids content was found after the treatment with the high-fat diet. This article is part of a Special Issue entitled "Status Epilepticus".
Collapse
Affiliation(s)
- Joanna Chwiej
- AGH University of Science and Technology, Faculty of Physics and Applied Computer Science, Krakow, Poland.
| | - Agnieszka Skoczen
- AGH University of Science and Technology, Faculty of Physics and Applied Computer Science, Krakow, Poland
| | - Katarzyna Matusiak
- AGH University of Science and Technology, Faculty of Physics and Applied Computer Science, Krakow, Poland
| | - Krzysztof Janeczko
- Jagiellonian University, Institute of Zoology, Department of Neuroanatomy, Krakow, Poland
| | - Agnieszka Patulska
- AGH University of Science and Technology, Faculty of Physics and Applied Computer Science, Krakow, Poland
| | | | - Rolf Simon
- Institut fur Synchrotronstrahlung, Research Centre Karlsruhe, Karlsruhe, Germany
| | - Malgorzata Ciarach
- Jagiellonian University, Institute of Zoology, Department of Neuroanatomy, Krakow, Poland
| | - Zuzanna Setkowicz
- Jagiellonian University, Institute of Zoology, Department of Neuroanatomy, Krakow, Poland
| |
Collapse
|
11
|
Centrone A. Infrared Imaging and Spectroscopy Beyond the Diffraction Limit. ANNUAL REVIEW OF ANALYTICAL CHEMISTRY (PALO ALTO, CALIF.) 2015; 8:101-26. [PMID: 26001952 DOI: 10.1146/annurev-anchem-071114-040435] [Citation(s) in RCA: 159] [Impact Index Per Article: 17.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
Progress in nanotechnology is enabled by and dependent on the availability of measurement methods with spatial resolution commensurate with nanomaterials' length scales. Chemical imaging techniques, such as scattering scanning near-field optical microscopy (s-SNOM) and photothermal-induced resonance (PTIR), have provided scientists with means of extracting rich chemical and structural information with nanoscale resolution. This review presents some basics of infrared spectroscopy and microscopy, followed by detailed descriptions of s-SNOM and PTIR working principles. Nanoscale spectra are compared with far-field macroscale spectra, which are widely used for chemical identification. Selected examples illustrate either technical aspects of the measurements or applications in materials science. Central to this review is the ability to record nanoscale infrared spectra because, although chemical maps enable immediate visualization, the spectra provide information to interpret the images and characterize the sample. The growing breadth of nanomaterials and biological applications suggest rapid growth for this field.
Collapse
Affiliation(s)
- Andrea Centrone
- Center for Nanoscale Science and Technology, National Institute of Standards and Technology, Gaithersburg, Maryland 20899;
| |
Collapse
|
12
|
Deegan AJ, Cinque G, Wehbe K, Konduru S, Yang Y. Tracking calcification in tissue-engineered bone using synchrotron micro-FTIR and SEM. Anal Bioanal Chem 2014; 407:1097-105. [DOI: 10.1007/s00216-014-8316-4] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2014] [Revised: 10/10/2014] [Accepted: 11/03/2014] [Indexed: 11/28/2022]
|
13
|
Harrison AJ, Bilgili EA, Beaudoin SP, Taylor LS. Atomic force microscope infrared spectroscopy of griseofulvin nanocrystals. Anal Chem 2013; 85:11449-55. [PMID: 24171582 PMCID: PMC3889117 DOI: 10.1021/ac4025889] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The goal of this work was to evaluate the ability of photothermal-induced resonance (PTIR) to measure the local infrared absorption spectra of crystalline organic drug nanoparticles embedded within solid matrices. Herein, the first reports of the chemical characterization of sub-100 nm organic crystals are described; infrared spectra of 90 nm griseofulvin particles were obtained, confirming the chemical resolution of PTIR beyond the diffraction limit. Additionally, particle size distributions via dynamic light scattering and PTIR image analysis were found to be similar, suggesting that the PTIR measurements are not significantly affected by inhomogeneous infrared absorptivity of this system. Thus as medical applications increasingly emphasize localized drug delivery via micro/nanoengineered structures, PTIR can be used to unambiguously chemically characterize drug formulations at these length scales.
Collapse
Affiliation(s)
- A. J. Harrison
- Chemical Engineering, Purdue University, 480 Stadium Mall Drive, West Lafayette, IN 47907-2100 (USA)
| | - E. A. Bilgili
- Tiernan Hall of Chemical, Biological, and Pharmaceutical Engineering, New Jersey Institute of Technology, 161 Warren St., Newark, NJ 07102-1982 (USA)
| | - S. P. Beaudoin
- Chemical Engineering, Purdue University, 480 Stadium Mall Drive, West Lafayette, IN 47907-2100 (USA)
| | - L. S. Taylor
- Industrial and Physical Pharmacy, Purdue University, 575 Stadium Mall Drive, West Lafayette, IN 47907-2091, (USA)
| |
Collapse
|
14
|
Lipiec E, Birarda G, Kowalska J, Lekki J, Vaccari L, Wiecheć A, Wood B, Kwiatek W. A new approach to studying the effects of ionising radiation on single cells using FTIR synchrotron microspectroscopy. Radiat Phys Chem Oxf Engl 1993 2013. [DOI: 10.1016/j.radphyschem.2013.03.037] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
|
15
|
Yao S, Seydou Y, Chen HH, Harte E, Ventura GD, Petibois C. The role of asbestos morphology on their cellular toxicity: an in vitro 3D Raman/Rayleigh imaging study. Anal Bioanal Chem 2013; 405:8701-7. [PMID: 23846589 DOI: 10.1007/s00216-013-7143-3] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2013] [Revised: 06/05/2013] [Accepted: 06/13/2013] [Indexed: 01/24/2023]
Abstract
Amphiboles caused cohorts of deaths in exposed workers, leading to some of the largest class actions in the industry. Once inhaled, these inorganic fibers are thought to be both chemically and morphologically toxic, and their biopersistence in the lungs over decades lead to progressive pathologies, mesothelioma, and asbestosis. However, this exceptionally long chronicity for human pathologies suggests that chemical toxicity is certainly low, suggesting that morphological parameters could be more relevant in the pathology. Here, we developed a 3D Raman/optical imaging methodology in vitro to characterize both morphological and chemical parameters of cell/fiber interactions. We determined that lung cells could vesiculate amphiboles with length below 5 μm or could embed those not exceeding 15 μm in their fibrous extracellular matrix. Lung cells can thus develop defense strategies for handling the biopersistence of inorganic species, which may thus have major impact for biosafety issues related to nanomaterials.
Collapse
Affiliation(s)
- Seydou Yao
- Université de Bordeaux, Inserm U1029, Avenue des Facultés, Bat. B2, 33405, Talence-Cedex, France
| | - Yao Seydou
- Université de Bordeaux, Inserm U1029, Avenue des Facultés, Bat. B2, 33405, Talence-Cedex, France
| | | | | | | | | |
Collapse
|
16
|
Mariangela CG, Seydou Y, Diego S, Sabine C, Augusto M, Petibois C. Experimental ATR device for real-time FTIR imaging of living cells using brilliant synchrotron radiation sources. Biotechnol Adv 2013; 31:402-7. [DOI: 10.1016/j.biotechadv.2011.11.009] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2011] [Accepted: 11/30/2011] [Indexed: 11/26/2022]
|
17
|
Vita N, Brubach JB, Hienerwadel R, Bremond N, Berthomieu D, Roy P, Berthomieu C. Electrochemically Induced Far-Infrared Difference Spectroscopy on Metalloproteins Using Advanced Synchrotron Technology. Anal Chem 2013; 85:2891-8. [DOI: 10.1021/ac303511g] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Affiliation(s)
- Nicolas Vita
- Lab Interactions Protein Metal, Commissariat à l’Energie Atomique (CEA), DSV, IBEB, Saint-Paul-lez-Durance,
F-13108, France
- Centre National de la Recherche Scientifique, UMR Biol Veget et Microbiol
Environ, Saint-Paul-lez-Durance, F-13108, France
- Aix-Marseille Université, Saint-Paul-lez-Durance, F-13108, France
- Société Civile Synchrotron SOLEIL, L’Orme des Merisiers,
St-Aubin BP48, 91192 Gif-sur-Yvette Cedex, France
| | - Jean-Blaise Brubach
- Société Civile Synchrotron SOLEIL, L’Orme des Merisiers,
St-Aubin BP48, 91192 Gif-sur-Yvette Cedex, France
| | - Rainer Hienerwadel
- Centre National de la Recherche Scientifique, UMR Biol Veget et Microbiol
Environ, Saint-Paul-lez-Durance, F-13108, France
- Lab Genet Biophys Plantes, Aix-Marseille Université, Marseille, F-13009,
France
- Commissariat à l’Energie Atomique (CEA), DSV, IBEB, Marseille,
F-13009, France
| | - Nicolas Bremond
- Lab Interactions Protein Metal, Commissariat à l’Energie Atomique (CEA), DSV, IBEB, Saint-Paul-lez-Durance,
F-13108, France
- Centre National de la Recherche Scientifique, UMR Biol Veget et Microbiol
Environ, Saint-Paul-lez-Durance, F-13108, France
- Aix-Marseille Université, Saint-Paul-lez-Durance, F-13108, France
| | - Dorothée Berthomieu
- Institut Charles Gerhardt, MACS, UMR 5253 CNRS-ENSCM-UM1-UM2, 8, rue
de l’Ecole Normale, 34296 Montpellier Cedex 5, France
| | - Pascale Roy
- Société Civile Synchrotron SOLEIL, L’Orme des Merisiers,
St-Aubin BP48, 91192 Gif-sur-Yvette Cedex, France
| | - Catherine Berthomieu
- Lab Interactions Protein Metal, Commissariat à l’Energie Atomique (CEA), DSV, IBEB, Saint-Paul-lez-Durance,
F-13108, France
- Centre National de la Recherche Scientifique, UMR Biol Veget et Microbiol
Environ, Saint-Paul-lez-Durance, F-13108, France
- Aix-Marseille Université, Saint-Paul-lez-Durance, F-13108, France
| |
Collapse
|
18
|
Lahiri B, Holland G, Centrone A. Chemical imaging beyond the diffraction limit: experimental validation of the PTIR technique. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2013; 9:439-45. [PMID: 23034929 DOI: 10.1002/smll.201200788] [Citation(s) in RCA: 59] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/11/2012] [Revised: 08/10/2012] [Indexed: 05/05/2023]
Abstract
Photothermal induced resonance (PTIR) has recently attracted great interest for enabling chemical identification and imaging with nanoscale resolution. In this work, electron beam nanopatterned polymer samples are fabricated directly on 3D zinc selenide prisms and used to experimentally evaluate the PTIR lateral resolution, sensitivity and linearity. It is shown that PTIR lateral resolution for chemical imaging is comparable to the lateral resolution obtained in the atomic force microscopy height images, up to the smallest feature measured (100 nm). Spectra and chemical maps are produced from the thinnest sample analyzed (40 nm). More importantly, experiments show for the first time that the PTIR signal increases linearly with thickness for samples up to ≈ 1 μm (linearity limit); a necessary requirement towards the use of the PTIR technique for quantitative chemical analysis at the nanoscale. Finally, the analysis of thicker samples provides the first evidence that the previously developed PTIR signal generation theory is correct. It is believed that the findings of this work will foster nanotechnology development in disparate applications by proving the basis for quantitative chemical analysis with nanoscale resolution.
Collapse
Affiliation(s)
- Basudev Lahiri
- NIST, Center for Nanoscale Science and Technology, Gaithersburg, MD 20899, USA
| | | | | |
Collapse
|
19
|
Katzenmeyer AM, Aksyuk V, Centrone A. Nanoscale infrared spectroscopy: improving the spectral range of the photothermal induced resonance technique. Anal Chem 2013; 85:1972-9. [PMID: 23363013 DOI: 10.1021/ac303620y] [Citation(s) in RCA: 73] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
Abstract
Photothermal induced resonance (PTIR) is a new technique which combines the chemical specificity of infrared (IR) spectroscopy with the lateral resolution of atomic force microscopy (AFM). PTIR requires a pulsed tunable laser for sample excitation and an AFM tip to measure the sample expansion induced by light absorption. The limited tunability of commonly available laser sources constrains the application of the PTIR technique to a portion of the IR spectrum. In this work, a broadly tunable pulsed laser relying on a difference frequency generation scheme in a GaSe crystal to emit light tunable from 1.55 μm to 16 μm (from 6450 cm(-1) to 625 cm(-1)) was interfaced with a commercial PTIR instrument. The result is a materials characterization platform capable of chemical imaging, in registry with atomic force images, with a spatial resolution that notably surpasses the light diffraction limit throughout the entire mid-IR spectral range. PTIR nanoscale spectra and images allow the identification of compositionally and optically similar yet distinct materials; organic, inorganic, and composite samples can be studied with this nanoscale analog of infrared spectroscopy, suggesting broad applicability. Additionally, we compare the results obtained with the two tunable lasers, which have different pulse lengths, to experimentally assess the recently developed theory of PTIR signal generation.
Collapse
Affiliation(s)
- Aaron M Katzenmeyer
- Center for Nanoscale Science and Technology, National Institute of Standards and Technology, Gaithersburg, Maryland 20899, United States
| | | | | |
Collapse
|
20
|
Kole MR, Reddy RK, Schulmerich MV, Gelber MK, Bhargava R. Discrete frequency infrared microspectroscopy and imaging with a tunable quantum cascade laser. Anal Chem 2012; 84:10366-72. [PMID: 23113653 PMCID: PMC3514576 DOI: 10.1021/ac302513f] [Citation(s) in RCA: 74] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
Fourier-transform infrared (FT-IR) imaging is a well-established modality but requires the acquisition of a spectrum over a large bandwidth, even in cases where only a few spectral features may be of interest. Discrete frequency infrared (DF-IR) methods are now emerging in which a small number of measurements may provide all the analytical information needed. The DF-IR approach is enabled by the development of new sources integrating frequency selection, in particular of tunable, narrow-bandwidth sources with enough power at each wavelength to successfully make absorption measurements. Here, we describe a DF-IR imaging microscope that uses an external cavity quantum cascade laser (QCL) as a source. We present two configurations, one with an uncooled bolometer as a detector and another with a liquid nitrogen cooled mercury cadmium telluride (MCT) detector and compare their performance to a commercial FT-IR imaging instrument. We examine the consequences of the coherent properties of the beam with respect to imaging and compare these observations to simulations. Additionally, we demonstrate that the use of a tunable laser source represents a distinct advantage over broadband sources when using a small aperture (narrower than the wavelength of light) to perform high-quality point mapping. The two advances highlight the potential application areas for these emerging sources in IR microscopy and imaging.
Collapse
Affiliation(s)
- Matthew R. Kole
- Department of Bioengineering and Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801 USA
| | - Rohith K. Reddy
- Department of Bioengineering and Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801 USA
| | - Matthew V. Schulmerich
- Department of Bioengineering and Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801 USA
| | - Matthew K. Gelber
- Department of Bioengineering and Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801 USA
| | - Rohit Bhargava
- Department of Bioengineering and Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801 USA
- Department of Mechanical Science and Engineering, Electrical and Computer Engineering, Micro and Nanotechnology Laboratory and University of Illinois Cancer Center, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801 USA
| |
Collapse
|
21
|
Le Naour F, Sandt C, Peng C, Trcera N, Chiappini F, Flank AM, Guettier C, Dumas P. In situ chemical composition analysis of cirrhosis by combining synchrotron fourier transform infrared and synchrotron X-ray fluorescence microspectroscopies on the same tissue section. Anal Chem 2012; 84:10260-6. [PMID: 23121424 DOI: 10.1021/ac302072t] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
Liver is subject to various chronic pathologies, progressively leading to cirrhosis, which is associated with an increased risk of hepatocellular carcinoma. There is an urgent need for diagnostic and prognostic markers of chronic liver diseases and liver cancer. Spectroscopy-based approaches can provide an overview of the chemical composition of a tissue sample offering the possibility of investigating in depth the subtle chemical changes associated with pathological states. In this study, we have addressed the composition of cirrhotic liver tissue by combining synchrotron Fourier transform infrared (FTIR) microspectroscopy and synchrotron micro-X-ray fluorescence (XRF) on the same tissue section using a single sample holder in copper. This allowed investigation of the in situ biochemical as well as elemental composition of cells and tissues at high spatial resolution. Cirrhosis is characterized by regeneration nodules surrounded by annular fibrosis. Hepatocytes within cirrhotic nodules were characterized by high content in esters and sugars as well as in phosphorus and iron compared with fibrotic septa. A high heterogeneity was observed between cirrhotic nodules in their content in sugars and iron. On fibrosis, synchrotron XRF revealed enrichment in calcium compared to cirrhotic hepatocytes. Careful scrutiny of tissue sections led to detection of the presence of microcrystals that were demonstrated as precipitates of calcite using synchrotron FTIR. These results demonstrated that synchrotron FTIR and synchrotron XRF microspectroscopies provide complementary information on the chemical composition of cirrhotic hepatocytes and fibrotic septa in cirrhosis.
Collapse
|
22
|
Noreen R, Moenner M, Hwu Y, Petibois C. FTIR spectro-imaging of collagens for characterization and grading of gliomas. Biotechnol Adv 2012; 30:1432-46. [DOI: 10.1016/j.biotechadv.2012.03.009] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2011] [Revised: 02/23/2012] [Accepted: 03/06/2012] [Indexed: 01/07/2023]
|
23
|
Chwiej J, Kutorasinska J, Janeczko K, Gzielo-Jurek K, Uram L, Appel K, Simon R, Setkowicz Z. Progress of elemental anomalies of hippocampal formation in the pilocarpine model of temporal lobe epilepsy--an X-ray fluorescence microscopy study. Anal Bioanal Chem 2012; 404:3071-80. [PMID: 23052869 PMCID: PMC3501183 DOI: 10.1007/s00216-012-6425-5] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2012] [Revised: 09/12/2012] [Accepted: 09/13/2012] [Indexed: 12/21/2022]
Abstract
In the present paper, X-ray fluorescence microscopy was applied to follow the processes occurring in rat hippocampal formation during the post-seizure period. In the study, one of the status epilepticus animal models of epilepsy was used, namely the model of temporal lobe epilepsy with pilocarpine-induced seizures. In order to analyze the dynamics of seizure-induced elemental changes, the samples taken from seizure-experiencing animals 3 h and 1, 4, and 7 days after proconvulsive agent administration were analyzed. The obtained results confirmed the utility of X-ray fluorescence microscopy in the research of mechanisms involved in the pathogenesis and progress of epilepsy. The topographic and quantitative elemental analysis of hippocampal formations from different periods of epileptogenesis showed that excitotoxicity, mossy fibers sprouting, and iron-induced oxidative stress may be the processes responsible for seizure-induced neurodegenerative changes and spontaneous recurrent seizures occurring in the chronic phase of the pilocarpine model. The analysis of correlations between the recorded elemental anomalies and quantitative parameters describing animal behavior in the acute period of pilocarpine-induced status epilepticus showed that the areal densities of selected elements measured in the latent period strongly depend on the progress of the acute phase. Especially important seem to be the observations done for Ca and Zn levels which suggest that the intensity of the pathological processes such as excitotoxicity and mossy fibers sprouting depend on the total time of seizure activity. These results as well as dependencies found between the levels of S, K, and Cu and the intensity of maximal seizures clearly confirm how important it is to control the duration and intensity of seizures in clinical practice.
Collapse
Affiliation(s)
- J Chwiej
- Faculty of Physics and Applied Computer Science, AGH University of Science and Technology, Al. Mickiewicza 30, 30-059 Krakow, Poland.
| | | | | | | | | | | | | | | |
Collapse
|
24
|
Yao S, Moenner M, Engdahl A, Petibois C. Use of synchrotron-radiation-based FTIR imaging for characterizing changes in cell contents. Anal Bioanal Chem 2012; 404:1311-6. [DOI: 10.1007/s00216-012-6223-0] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2011] [Revised: 06/14/2012] [Accepted: 06/20/2012] [Indexed: 12/27/2022]
|
25
|
Biological applications of synchrotron radiation infrared spectromicroscopy. Biotechnol Adv 2012; 30:1390-404. [PMID: 22401782 DOI: 10.1016/j.biotechadv.2012.02.012] [Citation(s) in RCA: 59] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2011] [Accepted: 02/20/2012] [Indexed: 11/24/2022]
Abstract
Extremely brilliant infrared (IR) beams provided by synchrotron radiation sources are now routinely used in many facilities with available commercial spectrometers coupled to IR microscopes. Using these intense non-thermal sources, a brilliance two or three order of magnitude higher than a conventional source is achievable through small pinholes (<10 μm) with a high signal to-noise ratio. IR spectroscopy is a powerful technique to investigate biological systems and offers many new imaging opportunities. The field of infrared biological imaging covers a wide range of fundamental issues and applied researches such as cell imaging or tissue imaging. Molecular maps with a spatial resolution down to the diffraction limit may be now obtained with a synchrotron radiation IR source also on thick samples. Moreover, changes of the protein structure are detectable in an IR spectrum and cellular molecular markers can be identified and used to recognize a pathological status of a tissue. Molecular structure and functions are strongly correlated and this aspect is particularly relevant for imaging. We will show that the brilliance of synchrotron radiation IR sources may enhance the sensitivity of a molecular signal obtained from small biosamples, e.g., a single cell, containing extremely small amounts of organic matter. We will also show that SR IR sources allow to study chemical composition and to identify the distribution of organic molecules in cells at submicron resolution is possible with a high signal-to-noise ratio. Moreover, the recent availability of two-dimensional IR detectors promises to push forward imaging capabilities in the time domain. Indeed, with a high current synchrotron radiation facility and a Focal Plane Array the chemical imaging of individual cells can be obtained in a few minutes. Within this framework important results are expected in the next years using synchrotron radiation and Free Electron Laser (FEL) sources for spectro-microscopy and spectral-imaging, alone or in combination with Scanning Near-field Optical Microscopy methods to study the molecular composition and dynamic changes in samples of biomedical interest at micrometric and submicrometric scales, respectively.
Collapse
|
26
|
Dillon CT. Synchrotron Radiation Spectroscopic Techniques as Tools for the Medicinal Chemist: Microprobe X-Ray Fluorescence Imaging, X-Ray Absorption Spectroscopy, and Infrared Microspectroscopy. Aust J Chem 2012. [DOI: 10.1071/ch11287] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Abstract
This review updates the recent advances and applications of three prominent synchrotron radiation techniques, microprobe X-ray fluorescence spectroscopy/imaging, X-ray absorption spectroscopy, and infrared microspectroscopy, and highlights how these tools are useful to the medicinal chemist. A brief description of the principles of the techniques is given with emphasis on the advantages of using synchrotron radiation-based instrumentation rather than instruments using typical laboratory radiation sources. This review focuses on several recent applications of these techniques to solve inorganic medicinal chemistry problems, focusing on studies of cellular uptake, distribution, and biotransformation of established and potential therapeutic agents. The importance of using these synchrotron-based techniques to assist the development of, or validate the chemistry behind, drug design is discussed.
Collapse
|
27
|
Holman HYN, Hao Z, Martin MC, Bechtel HA. Infrared Spectromicroscopy: Probing Live Cellular Responses to Environmental Changes. ACTA ACUST UNITED AC 2010. [DOI: 10.1080/08940886.2010.516737] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
|
28
|
Holman HYN, Bechtel HA, Hao Z, Martin MC. Synchrotron IR spectromicroscopy: chemistry of living cells. Anal Chem 2010; 82:8757-65. [PMID: 20839782 DOI: 10.1021/ac100991d] [Citation(s) in RCA: 101] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Abstract
Advanced analytical capabilities of synchrotron IR spectromicroscopy meet the demands of modern biological research for studying molecular reactions in individual living cells. (To listen to a podcast about this article, please go to the Analytical Chemistry multimedia page at pubs.acs.org/page/ancham/audio/index.html.).
Collapse
|
29
|
Petibois C, Desbat B. Clinical application of FTIR imaging: new reasons for hope. Trends Biotechnol 2010; 28:495-500. [PMID: 20828847 DOI: 10.1016/j.tibtech.2010.07.003] [Citation(s) in RCA: 50] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2010] [Revised: 06/28/2010] [Accepted: 07/08/2010] [Indexed: 12/28/2022]
Abstract
In the 1990s, Fourier transform infrared (FTIR) imaging arrived as an analytical tool for the biological sciences. However, major limitations have appeared with respect to modern techniques of clinical imaging; slow acquisition of data, diffraction limitations, inability to image living biosystems, and weak sensitivity of detectors. Recent technological developments have demonstrated that FTIR imaging can be used to image living biosamples at the surface of specific crystals, lateral resolution can reach 100 nm without diffraction limits, and real-time imaging is accessible. These analytical improvements, in conjunction with industrial efforts in providing a new generation of high photon flux IR sources and more sensitive detectors, will give FTIR imaging a 'second chance' to be introduced into the clinic.
Collapse
Affiliation(s)
- Cyril Petibois
- Université de Bordeaux, CNRS UMR 5248 CBMN, 2 Rue Robert Escarpit, 33604 Pessac-Cedex, France.
| | | |
Collapse
|
30
|
Petibois C, Cestelli-Guidi M, Piccinini M, Moenner M, Marcelli A. Synchrotron radiation FTIR imaging in minutes: a first step towards real-time cell imaging. Anal Bioanal Chem 2010; 397:2123-9. [PMID: 20517599 DOI: 10.1007/s00216-010-3817-2] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2010] [Revised: 04/30/2010] [Accepted: 05/02/2010] [Indexed: 11/26/2022]
Abstract
FTIR microscopy with a focal plane array (FPA) of detectors enables routine chemical imaging on individual cells in only a few minutes. The brilliance of synchrotron radiation (SR) IR sources may enhance the signal obtained from such small biosamples containing small amounts of organic matter. We investigated individual cells obtained from a cell culture specifically developed for transmission FTIR imaging using either a Globar or an SR source coupled to the same instrumentation. SR-IR source focussing was optimized to control the energy distribution on the FPA of detectors. Here we show that accessing the IR absorption distribution from all the organic contents of cells at 1 x 1 microm pixel resolution was possible only with high circulating current (> or = 1.2 A) illuminating a limited number of the FPA's detectors to increase the signal-to-noise ratio of IR images. Finally, a high-current SR ring is mandatory for collecting FTIR images of biosamples with a high contrast in minutes.
Collapse
Affiliation(s)
- C Petibois
- Université de Bordeaux 2, CNRS UMR 5084, B8 Avenue des Facultés, 33405 Pessac-Cedex, France.
| | | | | | | | | |
Collapse
|
31
|
Della Ventura G, Bellatreccia F, Marcelli A, Cestelli Guidi M, Piccinini M, Cavallo A, Piochi M. Application of micro-FTIR imaging in the Earth sciences. Anal Bioanal Chem 2010; 397:2039-49. [PMID: 20506014 DOI: 10.1007/s00216-010-3811-8] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2009] [Revised: 04/28/2010] [Accepted: 04/29/2010] [Indexed: 11/25/2022]
Abstract
In this paper we describe recent applications of micro-infrared imaging in the Earth sciences. We address, in particular, the use of Fourier-transform infrared (FTIR) spectroscopy in characterizing the zoning and speciation of H and C in a variety of geological materials, including microporous minerals, nominally anhydrous volcanic minerals (NAMs), and crystal inclusions. These investigations show that use of the modern techniques of FTIR imaging enables detection of the zoning of volatile species across the studied samples, and possible configuration changes of structurally-bound carbon molecular species (e.g., CO(2) vs CO(3)) during crystal growth. Such features, which are not accessible with other micro-analytical techniques, may provide information about the physicochemical properties which act as constraints in the genesis of the samples, and important information about the evolution of the geological system. Tests performed with focal-plane-array detectors (FPA) show that resolution close to the diffraction limit can be achieved if the amounts of the target molecules in the sample are substantially different. We also point out the possibility of using FTIR imaging for investigations under non-ambient conditions.
Collapse
Affiliation(s)
- G Della Ventura
- Dipartimento Scienze Geologiche, Università Roma Tre, 00146 Roma, Italy.
| | | | | | | | | | | | | |
Collapse
|
32
|
Analytical characterization of cell–asbestos fiber interactions in lung pathogenesis. Anal Bioanal Chem 2010; 397:2079-89. [DOI: 10.1007/s00216-010-3773-x] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2010] [Revised: 04/15/2010] [Accepted: 04/22/2010] [Indexed: 10/19/2022]
|
33
|
Petibois C. Imaging methods for elemental, chemical, molecular, and morphological analyses of single cells. Anal Bioanal Chem 2010; 397:2051-65. [DOI: 10.1007/s00216-010-3618-7] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2009] [Revised: 02/22/2010] [Accepted: 02/24/2010] [Indexed: 10/19/2022]
|