1
|
Matrix Discriminant Analysis Evidenced Surface-Lithium as an Important Factor to Increase the Hydrolytic Saccharification of Sugarcane Bagasse. Molecules 2019; 24:molecules24193614. [PMID: 31597244 PMCID: PMC6804010 DOI: 10.3390/molecules24193614] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2019] [Revised: 09/10/2019] [Accepted: 09/20/2019] [Indexed: 11/17/2022] Open
Abstract
Statistical evidence pointing to the very soft change in the ionic composition on the surface of the sugar cane bagasse is crucial to improve yields of sugars by hydrolytic saccharification. Removal of Li+ by pretreatments exposing -OH sites was the most important factor related to the increase of saccharification yields using enzyme cocktails. Steam Explosion and Microwave:H2SO4 pretreatments produced unrelated structural changes, but similar ionic distribution patterns. Both increased the saccharification yield 1.74-fold. NaOH produced structural changes related to Steam Explosion, but released surface-bounded Li+ obtaining 2.04-fold more reducing sugars than the control. In turn, the higher amounts in relative concentration and periodic structures of Li+ on the surface observed in the control or after the pretreatment with Ethanol:DMSO:Ammonium Oxalate, blocked -OH and O- available for ionic sputtering. These changes correlated to 1.90-fold decrease in saccharification yields. Li+ was an activator in solution, but its presence and distribution pattern on the substrate was prejudicial to the saccharification. Apparently, it acts as a phase-dependent modulator of enzyme activity. Therefore, no correlations were found between structural changes and the efficiency of the enzymatic cocktail used. However, there were correlations between the Li+ distribution patterns and the enzymatic activities that should to be shown.
Collapse
|
2
|
Marine Fungi: Biotechnological Perspectives from Deep-Hypersaline Anoxic Basins. DIVERSITY 2019. [DOI: 10.3390/d11070113] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
Deep-sea hypersaline anoxic basins (DHABs) are one of the most hostile environments on Earth. Even though DHABs have hypersaline conditions, anoxia and high hydrostatic pressure, they host incredible microbial biodiversity. Among eukaryotes inhabiting these systems, recent studies demonstrated that fungi are a quantitatively relevant component. Here, fungi can benefit from the accumulation of large amounts of organic material. Marine fungi are also known to produce bioactive molecules. In particular, halophilic and halotolerant fungi are a reservoir of enzymes and secondary metabolites with valuable applications in industrial, pharmaceutical, and environmental biotechnology. Here we report that among the fungal taxa identified from the Mediterranean and Red Sea DHABs, halotolerant halophilic species belonging to the genera Aspergillus and Penicillium can be used or screened for enzymes and bioactive molecules. Fungi living in DHABs can extend our knowledge about the limits of life, and the discovery of new species and molecules from these environments can have high biotechnological potential.
Collapse
|
3
|
Functional characterization of GH7 endo-1,4-β-glucanase from Aspergillus fumigatus and its potential industrial application. Protein Expr Purif 2018; 150:1-11. [DOI: 10.1016/j.pep.2018.04.016] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2018] [Revised: 04/24/2018] [Accepted: 04/24/2018] [Indexed: 11/23/2022]
|
4
|
Segato F, Dias B, Berto GL, de Oliveira DM, De Souza FHM, Citadini AP, Murakami MT, Damásio ARL, Squina FM, Polikarpov I. Cloning, heterologous expression and biochemical characterization of a non-specific endoglucanase family 12 from Aspergillus terreus NIH2624. BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS 2017; 1865:395-403. [PMID: 28088615 DOI: 10.1016/j.bbapap.2017.01.003] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/24/2016] [Revised: 12/20/2016] [Accepted: 01/06/2017] [Indexed: 01/30/2023]
Abstract
The cellulases from Glycoside Hydrolyses family 12 (GH12) play an important role in cellulose degradation and plant cell wall deconstruction being widely used in a number of bioindustrial processes. Aiming to contribute toward better comprehension of these class of the enzymes, here we describe a high-yield secretion of a endoglucanase GH12 from Aspegillus terreus (AtGH12), which was cloned and expressed in Aspergillus nidulans strain A773. The purified protein was used for complete biochemical and functional characterization. The optimal temperature and pH of the enzyme were 55°C and 5.0 respectively, which has high activity against β-glucan and xyloglucan and also is active toward glucomannan and CMC. The enzyme retained activity up to 60°C. AtGH12 is strongly inhibited by Cu2+, Fe2+, Cd2+, Mn2+, Ca2+, Zn2+ and EDTA, whereas K+, Tween, Cs+, DMSO, Triton X-100 and Mg2+ enhanced the enzyme activity. Furthermore, SAXS data reveal that the enzyme has a globular shape and CD analysis demonstrated a prevalence of a β-strand structure corroborating with typical β-sheets fold commonly found for other endoglucanases from GH12 family.
Collapse
Affiliation(s)
- Fernando Segato
- Departamento de Física e Informática, Instituto de Física de São Carlos, Universidade de São Paulo, São Carlos, SP, Brazil; Departamento de Biotecnologia, Escola de Engenharia de Lorena - Universidade de São Paulo, Lorena, SP, Brazil
| | - Bruno Dias
- Laboratório Nacional de Ciência e Tecnologia do Bioetanol, Centro Nacional de Pesquisa em Energia e Materiais, Campinas, SP, Brazil
| | - Gabriela L Berto
- Departamento de Física e Informática, Instituto de Física de São Carlos, Universidade de São Paulo, São Carlos, SP, Brazil; Departamento de Biotecnologia, Escola de Engenharia de Lorena - Universidade de São Paulo, Lorena, SP, Brazil
| | - Dyoni M de Oliveira
- Laboratório Nacional de Ciência e Tecnologia do Bioetanol, Centro Nacional de Pesquisa em Energia e Materiais, Campinas, SP, Brazil
| | - Flávio H M De Souza
- Laboratório Nacional de Biociências, Centro Nacional de Pesquisa em Energia e Materiais, Campinas, SP, Brazil
| | - Ana Paula Citadini
- Laboratório Nacional de Ciência e Tecnologia do Bioetanol, Centro Nacional de Pesquisa em Energia e Materiais, Campinas, SP, Brazil
| | - Mario T Murakami
- Laboratório Nacional de Biociências, Centro Nacional de Pesquisa em Energia e Materiais, Campinas, SP, Brazil
| | - André R L Damásio
- Laboratório Nacional de Ciência e Tecnologia do Bioetanol, Centro Nacional de Pesquisa em Energia e Materiais, Campinas, SP, Brazil
| | - Fábio Márcio Squina
- Laboratório Nacional de Ciência e Tecnologia do Bioetanol, Centro Nacional de Pesquisa em Energia e Materiais, Campinas, SP, Brazil
| | - Igor Polikarpov
- Departamento de Física e Informática, Instituto de Física de São Carlos, Universidade de São Paulo, São Carlos, SP, Brazil.
| |
Collapse
|
5
|
Calzado F, Prates ET, Gonçalves TA, Rubio MV, Zubieta MP, Squina FM, Skaf MS, Damásio AR. Molecular basis of substrate recognition and specificity revealed in family 12 glycoside hydrolases. Biotechnol Bioeng 2016; 113:2577-2586. [DOI: 10.1002/bit.26036] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2016] [Revised: 05/29/2016] [Accepted: 06/05/2016] [Indexed: 02/02/2023]
Affiliation(s)
- Felipe Calzado
- Laboratório Nacional de Ciência e Tecnologia do Bioetanol (CTBE); Centro Nacional de Pesquisa em Energia e Materiais (CNPEM); Campinas-SP Brazil
- Department of Biochemistry and Tissue Biology, Institute of Biology; University of Campinas (UNICAMP); Campinas-SP 13083862 Brazil
| | - Erica T. Prates
- Institute of Chemistry; University of Campinas (UNICAMP); Campinas-SP Brazil
| | - Thiago A. Gonçalves
- Laboratório Nacional de Ciência e Tecnologia do Bioetanol (CTBE); Centro Nacional de Pesquisa em Energia e Materiais (CNPEM); Campinas-SP Brazil
- Department of Biochemistry and Tissue Biology, Institute of Biology; University of Campinas (UNICAMP); Campinas-SP 13083862 Brazil
| | - Marcelo V. Rubio
- Laboratório Nacional de Ciência e Tecnologia do Bioetanol (CTBE); Centro Nacional de Pesquisa em Energia e Materiais (CNPEM); Campinas-SP Brazil
- Department of Biochemistry and Tissue Biology, Institute of Biology; University of Campinas (UNICAMP); Campinas-SP 13083862 Brazil
| | - Mariane P. Zubieta
- Laboratório Nacional de Ciência e Tecnologia do Bioetanol (CTBE); Centro Nacional de Pesquisa em Energia e Materiais (CNPEM); Campinas-SP Brazil
- Department of Biochemistry and Tissue Biology, Institute of Biology; University of Campinas (UNICAMP); Campinas-SP 13083862 Brazil
| | - Fabio M. Squina
- Laboratório Nacional de Ciência e Tecnologia do Bioetanol (CTBE); Centro Nacional de Pesquisa em Energia e Materiais (CNPEM); Campinas-SP Brazil
| | - Munir S. Skaf
- Institute of Chemistry; University of Campinas (UNICAMP); Campinas-SP Brazil
| | - André R.L. Damásio
- Laboratório Nacional de Ciência e Tecnologia do Bioetanol (CTBE); Centro Nacional de Pesquisa em Energia e Materiais (CNPEM); Campinas-SP Brazil
- Department of Biochemistry and Tissue Biology, Institute of Biology; University of Campinas (UNICAMP); Campinas-SP 13083862 Brazil
| |
Collapse
|