1
|
Mammadova GZ, Mertsalov DF, Shchevnikov DM, Grigoriev MS, Akkurt M, Yıldırım SÖ, Bhattarai A. Crystal structures and Hirshfeld surface analyses of N, N-di-methyl-acetamide-1-(dimethyl-λ 4-aza-nyl-idene)ethan-1-ol tribromide (1/1), N, N-di-methyl-acetamide-1-(dimethyl-λ 4-aza-nyl-idene)ethan-1-ol di-bromido-iodate (1/1) and N, N-di-methyl-acetamide-1-(dimethyl-λ 4-aza-nyl-idene)ethan-1-ol di-chlorido-iodate (1/1). Acta Crystallogr E Crystallogr Commun 2023; 79:690-697. [PMID: 37601404 PMCID: PMC10439411 DOI: 10.1107/s2056989023005509] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2023] [Accepted: 06/22/2023] [Indexed: 08/22/2023]
Abstract
In the title compounds, N,N-di-methyl-acetamide-1-(dimethyl-λ4-aza-nyl-idene)ethan-1-ol tribromide (1/1), C4H9NO·C4H10NO+·Br3 - or [(C4H9NO)·(C4H10NO)](Br3), (I), N,N-di-methyl-acetamide-1-(dimethyl-λ4-aza-nyl-idene)ethan-1-ol di-bromido-iodate (1/1), C4H9NO·C4H10NO+·Br2I- or [(C4H9NO)·(C4H10NO)](Br2I), (II), and N,N-di-methyl-acetamide-1-(dimethyl-λ4-aza-nyl-idene)ethan-1-ol di-chlorido-iodate (1/1), C4H9NO·C4H10NO+·Cl2I- or [(C4H9NO)·(C4H10NO)]·(Cl2I), (III), all the anions are almost linear in geometry and all the cations, except for the methyl H atoms, are essentially planar. In the crystal structure of (I), the cations are linked by pairs of C-H⋯O hydrogen bonds, forming inversion dimers with an R 2 2(8) ring motif. These dimers also exhibit O-H⋯O hydrogen bonding. Dimerized cation pairs and anions are arranged in columns along the a axis. In the crystal of (II), the cations are linked by pairs of O-H⋯O and C-H⋯O hydrogen bonds, forming an R 4 4(14) ring motif. These groups of cations and the anions form individual columns along the a axis and jointly reside in planes roughly parallel to (011). In the crystal of (III), cations and anions also form columns parallel to the a axis, resulting in layers parallel to the (020) plane. Furthermore, the crystal structures of (I), (II) and (III) are consolidated by strong halogen (Br and/or I and/or Cl)⋯H and weak van der Waals inter-actions. In addition to the structural evaluation, a Hirshfeld surface analysis was carried out.
Collapse
Affiliation(s)
- Gunay Z. Mammadova
- Organic Chemistry Department, Baku State University, Z. Xalilov Str. 23, Az 1148 Baku, Azerbaijan
| | - Dmitriy F. Mertsalov
- Peoples’ Friendship University of Russia (RUDN University), 6 Miklukho-Maklaya St., Moscow 117198, Russian Federation
| | - Dmitriy M. Shchevnikov
- Peoples’ Friendship University of Russia (RUDN University), 6 Miklukho-Maklaya St., Moscow 117198, Russian Federation
| | - Mikhail S. Grigoriev
- Frumkin Institute of Physical Chemistry and Electrochemistry, Russian Academy of Sciences, Leninsky pr. 31, bld. 4, Moscow 119071, Russian Federation
| | - Mehmet Akkurt
- Department of Physics, Faculty of Sciences, Erciyes University, 38039 Kayseri, Türkiye
| | - Sema Öztürk Yıldırım
- Department of Physics, Faculty of Sciences, Erciyes University, 38039 Kayseri, Türkiye
- Department of Physics, Faculty of Science, Eskisehir Technical University, Yunus Emre Campus, 26470 Eskisehir, Türkiye
| | - Ajaya Bhattarai
- Department of Chemistry, M.M.A.M.C., Tribhuvan University, Biratnagar, Nepal
| |
Collapse
|
2
|
Chandana SN, Ganesha DP, Sreenatha NR, Harisha AS, Lakshminarayana BN. Structural, Hirshfeld surface and three-dimensional inter-action-energy studies of 1,3,5-triethyl 2-amino-3,5-di-cyano-4,6-bis-(4-fluoro-phen-yl)cyclo-hex-1-ene-1,3,5-tri-carboxyl-ate. Acta Crystallogr E Crystallogr Commun 2023; 79:446-450. [PMID: 37151838 PMCID: PMC10162083 DOI: 10.1107/s2056989023003134] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2022] [Accepted: 04/04/2023] [Indexed: 05/09/2023]
Abstract
In the title compound, C29H27F2N3O6, which crystallizes in the monoclinic space group P21/c, the cyclo-hexenone ring is puckered and adopts an envelope conformation. The crystal structure features various inter-molecular inter-actions, such as N-H⋯O, C-H⋯N and C-H⋯O. These inter-actions were investigated using Hirshfeld surface analysis and the three-dimensional inter-action energies were calculated using the B3LYP/6-31 G(d,p) energy density model.
Collapse
Affiliation(s)
- S. N. Chandana
- Department of Physics, Adichunchanagiri Institute of Technology, Chikkamagaluru 577102, Karnataka, India
- Department of Physics, Rajeev Institute of Technology, Hassan 573201, Karnataka, India
| | - D. P. Ganesha
- Department of Physics, Adichunchanagiri Institute of Technology, Chikkamagaluru 577102, Karnataka, India
- Department of Physics, Rajeev Institute of Technology, Hassan 573201, Karnataka, India
| | - N. R. Sreenatha
- Department of Physics, Government Engineering College, Bedarapura, Chamarajanagara 571313, Karnataka, India
| | - A. S. Harisha
- Alkem Laboratories Ltd, R&D Centre, Industrial Estate, 4th Phase, Bangalore, Karnataka, India
| | - B. N. Lakshminarayana
- Department of Physics, Adichunchanagiri Institute of Technology, Chikkamagaluru 577102, Karnataka, India
- Correspondence e-mail:
| |
Collapse
|
3
|
Mertsalov DF, Alekseeva KA, Daria MS, Cheshigin ME, Çelikesir ST, Akkurt M, Grigoriev MS, Mlowe S. (3a S,4 R,5 R,6 S,7a R)-4,5-Di-bromo-2-[4-(tri-fluoro-meth-yl)phen-yl]-2,3,3a,4,5,6,7,7a-octa-hydro-3a,6-ep-oxy-1 H-isoindol-1-one: crystal structure and Hirshfeld surface analysis. Acta Crystallogr E Crystallogr Commun 2021; 77:466-472. [PMID: 34026248 PMCID: PMC8100269 DOI: 10.1107/s2056989021003200] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2021] [Accepted: 03/26/2021] [Indexed: 11/10/2022]
Abstract
The asymmetric unit of the title compound, C15H12Br2F3NO2, consists of two crystallographically independent mol-ecules. In both mol-ecules, the pyrrolidine and tetra-hydro-furan rings adopt an envelope conformation. In the crystal, mol-ecule pairs generate centrosymmetric rings with R 2 2(8) motifs linked by C-H⋯O hydrogen bonds. These pairs of mol-ecules form a tetra-meric supra-molecular motif, leading to mol-ecular layers parallel to the (100) plane by C-H⋯π and C-Br⋯π inter-actions. Inter-layer van der Waals and inter-halogen inter-actions stabilize mol-ecular packing. The F atoms of the CF3 groups of both mol-ecules are disordered over two sets of sites with refined site occupancies of 0.60 (3)/0.40 (3) and 0.640 (15)/0.360 (15). The most important contributions to the surface contacts of both mol-ecules are from H⋯H (23.8 and 22.4%), Br⋯H/H⋯Br (18.3 and 12.3%), O⋯H/H⋯O (14.3 and 9.7%) and F⋯H/H⋯F (10.4 and 19.1%) inter-actions, as concluded from a Hirshfeld surface analysis.
Collapse
Affiliation(s)
- Dmitriy F. Mertsalov
- Department of Organic Chemistry, Peoples’ Friendship University of Russia (RUDN University), 6 Miklukho-Maklaya St., 117198, Moscow, Russian Federation
| | - Kseniia A. Alekseeva
- Department of Organic Chemistry, Peoples’ Friendship University of Russia (RUDN University), 6 Miklukho-Maklaya St., 117198, Moscow, Russian Federation
| | - Magrycheva S. Daria
- Department of Organic Chemistry, Peoples’ Friendship University of Russia (RUDN University), 6 Miklukho-Maklaya St., 117198, Moscow, Russian Federation
| | - Maxim E. Cheshigin
- Department of Organic Chemistry, Peoples’ Friendship University of Russia (RUDN University), 6 Miklukho-Maklaya St., 117198, Moscow, Russian Federation
| | | | - Mehmet Akkurt
- Department of Physics, Faculty of Sciences, Erciyes University, 38039 Kayseri, Turkey
| | - Mikhail S. Grigoriev
- Frumkin Institute of Physical Chemistry and Electrochemistry, Russian Academy of Sciences, Leninskiy prospect 31-4, Moscow 119071, Russian Federation
| | - Sixberth Mlowe
- University of Dar es Salaam, Dar es Salaam University College of Education, Department of Chemistry, PO Box 2329, Dar es Salaam, Tanzania
| |
Collapse
|