Brain-vascular segmentation for SEEG planning via a 3D fully-convolutional neural network

All answers are in the images: A review of deep learning for cerebrovascular segmentation

Cerebrovascular imaging is a common examination. Its accurate cerebrovascular segmentation become an important auxiliary method for the diagnosis and treatment of cerebrovascular diseases, which has received extensive attention from researchers. Deep learning is a heuristic method that encourages researchers to derive answers from the images by driving datasets. With the continuous development of datasets and deep learning theory, it has achieved important success for cerebrovascular segmentation. Detailed survey is an important reference for researchers. To comprehensively analyze the newest cerebrovascular segmentation, we have organized and discussed researches centered on deep learning. This survey comprehensively reviews deep learning for cerebrovascular segmentation since 2015, it mainly includes sliding window based models, U-Net based models, other CNNs based models, small-sample based models, semi-supervised or unsupervised models, fusion based models, Transformer based models, and graphics based models. We organize the structures, improvement, and important parameters of these models, as well as analyze development trends and quantitative assessment. Finally, we have discussed the challenges and opportunities of possible research directions, hoping that our survey can provide researchers with convenient reference.

Knowledge-based automated planning system for StereoElectroEncephaloGraphy: A center-based scenario

Surgical planning for StereoElectroEncephaloGraphy (SEEG) is a complex and patient specific task, where the experience and medical workflow of each institution may influence the final planning choices. To account for this variability, we developed a data-based Computer Assisted Planning (CAP) solution able to exploit the knowledge extracted by past cases. By the analysis of retrospective patients' data sets, our system proposes a pool of trajectories commonly used by the institution, which can be selected to initialize a new patient plan. An optimization framework adapts those to the patient's anatomy by optimizing clinical requirements (e.g. distance from vessel, gray matter recording and insertion angle), and adapting its strategy based on the trajectory type selected.The system has been customized based on the data of a single institution. Two neurosurgeons, working in a high-volume hospital, have validated it by using 15 retrospective patient data sets, with more than 200 trajectories reviewed. Both surgeons considered ~81% of the optimized trajectories as clinically feasible (75% inter-rater reliability). Quantitative comparison of distance from vessels, insertion angle and gray matter recording index showed that the optimized trajectories reached superior or comparable values with respect to the original manual plans. The results suggest that a tailored center-based solution could increase the acceptance rate of the automated trajectories proposed.