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Manan MA, Jinchao F, Khan TM, Yaqub M, Ahmed S, Chuhan IS. Semantic segmentation of retinal exudates using a residual encoder-decoder architecture in diabetic retinopathy. Microsc Res Tech 2023; 86:1443-1460. [PMID: 37194727 DOI: 10.1002/jemt.24345] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2023] [Revised: 04/21/2023] [Accepted: 05/04/2023] [Indexed: 05/18/2023]
Abstract
Exudates are a common sign of diabetic retinopathy, which is a disease that affects the blood vessels in the retina. Early detection of exudates is critical to avoiding vision problems through continuous screening and treatment. In traditional clinical practice, the involved lesions are manually detected using photographs of the fundus. However, this task is cumbersome and time-consuming and requires intense effort due to the small size of the lesion and the low contrast of the images. Thus, computer-assisted diagnosis of retinal disease based on the detection of red lesions has been actively explored recently. In this paper, we present a comparison of deep convolutional neural network (CNN) architectures and propose a residual CNN with residual skip connections to reduce the parameter for the semantic segmentation of exudates in retinal images. A suitable image augmentation technique is used to improve the performance of network architecture. The proposed network can robustly segment exudates with high accuracy, which makes it suitable for diabetic retinopathy screening. A comparative performance analysis of three benchmark databases: E-ophtha, DIARETDB1, and Hamilton Ophthalmology Institute's Macular Edema, is presented. The proposed method achieves a precision of 0.95, 0.92, 0.97, accuracy of 0.98, 0.98, 0.98, sensitivity of 0.97, 0.95, 0.95, specificity of 0.99, 0.99, 0.99, and area under the curve of 0.97, 0.94, and 0.96, respectively. RESEARCH HIGHLIGHTS: The research focuses on the detection and segmentation of exudates in diabetic retinopathy, a disease affecting the retina. Early detection of exudates is important to avoid vision problems and requires continuous screening and treatment. Currently, manual detection is time-consuming and requires intense effort. The authors compare qualitative results of the state-of-the-art convolutional neural network (CNN) architectures and propose a computer-assisted diagnosis approach based on deep learning, using a residual CNN with residual skip connections to reduce parameters. The proposed method is evaluated on three benchmark databases and demonstrates high accuracy and suitability for diabetic retinopathy screening.
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Affiliation(s)
- Malik Abdul Manan
- Beijing Key Laboratory of Computational Intelligence and Intelligent System, Faculty of Information Technology, Beijing University of Technology, Beijing, China
| | - Feng Jinchao
- Beijing Key Laboratory of Computational Intelligence and Intelligent System, Faculty of Information Technology, Beijing University of Technology, Beijing, China
| | - Tariq M Khan
- School of IT, Deakin University, Waurn Ponds, Australia
| | - Muhammad Yaqub
- Beijing Key Laboratory of Computational Intelligence and Intelligent System, Faculty of Information Technology, Beijing University of Technology, Beijing, China
| | - Shahzad Ahmed
- Beijing Key Laboratory of Computational Intelligence and Intelligent System, Faculty of Information Technology, Beijing University of Technology, Beijing, China
| | - Imran Shabir Chuhan
- Interdisciplinary Research Institute, Faculty of Science, Beijing University of Technology, Beijing, China
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Iqbal S, Khan TM, Naveed K, Naqvi SS, Nawaz SJ. Recent trends and advances in fundus image analysis: A review. Comput Biol Med 2022; 151:106277. [PMID: 36370579 DOI: 10.1016/j.compbiomed.2022.106277] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2022] [Revised: 10/19/2022] [Accepted: 10/30/2022] [Indexed: 11/05/2022]
Abstract
Automated retinal image analysis holds prime significance in the accurate diagnosis of various critical eye diseases that include diabetic retinopathy (DR), age-related macular degeneration (AMD), atherosclerosis, and glaucoma. Manual diagnosis of retinal diseases by ophthalmologists takes time, effort, and financial resources, and is prone to error, in comparison to computer-aided diagnosis systems. In this context, robust classification and segmentation of retinal images are primary operations that aid clinicians in the early screening of patients to ensure the prevention and/or treatment of these diseases. This paper conducts an extensive review of the state-of-the-art methods for the detection and segmentation of retinal image features. Existing notable techniques for the detection of retinal features are categorized into essential groups and compared in depth. Additionally, a summary of quantifiable performance measures for various important stages of retinal image analysis, such as image acquisition and preprocessing, is provided. Finally, the widely used in the literature datasets for analyzing retinal images are described and their significance is emphasized.
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Affiliation(s)
- Shahzaib Iqbal
- Department of Electrical and Computer Engineering, COMSATS University Islamabad (CUI), Islamabad, Pakistan
| | - Tariq M Khan
- School of Computer Science and Engineering, University of New South Wales, Sydney, NSW, Australia.
| | - Khuram Naveed
- Department of Electrical and Computer Engineering, COMSATS University Islamabad (CUI), Islamabad, Pakistan; Department of Electrical and Computer Engineering, Aarhus University, Aarhus, Denmark
| | - Syed S Naqvi
- Department of Electrical and Computer Engineering, COMSATS University Islamabad (CUI), Islamabad, Pakistan
| | - Syed Junaid Nawaz
- Department of Electrical and Computer Engineering, COMSATS University Islamabad (CUI), Islamabad, Pakistan
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Bhimavarapu U, Battineni G. Automatic Microaneurysms Detection for Early Diagnosis of Diabetic Retinopathy Using Improved Discrete Particle Swarm Optimization. J Pers Med 2022; 12:jpm12020317. [PMID: 35207805 PMCID: PMC8878235 DOI: 10.3390/jpm12020317] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2022] [Revised: 02/17/2022] [Accepted: 02/18/2022] [Indexed: 02/06/2023] Open
Abstract
Diabetic retinopathy (DR) is one of the most important microvascular complications associated with diabetes mellitus. The early signs of DR are microaneurysms, which can lead to complete vision loss. The detection of DR at an early stage can help to avoid non-reversible blindness. To do this, we incorporated fuzzy logic techniques into digital image processing to conduct effective detection. The digital fundus images were segmented using particle swarm optimization to identify microaneurysms. The particle swarm optimization clustering combined the membership functions by grouping the high similarity data into clusters. Model testing was conducted on the publicly available dataset called DIARETDB0, and image segmentation was done by probability-based (PBPSO) clustering algorithms. Different fuzzy models were applied and the outcomes were compared with our probability discrete particle swarm optimization algorithm. The results revealed that the proposed PSO algorithm achieved an accuracy of 99.9% in the early detection of DR.
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Affiliation(s)
- Usharani Bhimavarapu
- Department of Computer Science and Engineering, Koneru Lakshmaiah Education Foundation, Vaddeswaram 522502, Andhra Pradesh, India;
| | - Gopi Battineni
- Clinical Research Center, School of Medicinal and Health Products Sciences, University of Camerino, 62032 Camerino, Italy
- Correspondence: ; Tel.: +39-3331728206
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Accuracy of Deep Learning Algorithms for the Diagnosis of Retinopathy of Prematurity by Fundus Images: A Systematic Review and Meta-Analysis. J Ophthalmol 2021; 2021:8883946. [PMID: 34394982 PMCID: PMC8363465 DOI: 10.1155/2021/8883946] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2020] [Revised: 06/30/2021] [Accepted: 07/27/2021] [Indexed: 12/14/2022] Open
Abstract
Background Retinopathy of prematurity (ROP) occurs in preterm infants and may contribute to blindness. Deep learning (DL) models have been used for ophthalmologic diagnoses. We performed a systematic review and meta-analysis of published evidence to summarize and evaluate the diagnostic accuracy of DL algorithms for ROP by fundus images. Methods We searched PubMed, EMBASE, Web of Science, and Institute of Electrical and Electronics Engineers Xplore Digital Library on June 13, 2021, for studies using a DL algorithm to distinguish individuals with ROP of different grades, which provided accuracy measurements. The pooled sensitivity and specificity values and the area under the curve (AUC) of summary receiver operating characteristics curves (SROC) summarized overall test performance. The performances in validation and test datasets were assessed together and separately. Subgroup analyses were conducted between the definition and grades of ROP. Threshold and nonthreshold effects were tested to assess biases and evaluate accuracy factors associated with DL models. Results Nine studies with fifteen classifiers were included in our meta-analysis. A total of 521,586 objects were applied to DL models. For combined validation and test datasets in each study, the pooled sensitivity and specificity were 0.953 (95% confidence intervals (CI): 0.946-0.959) and 0.975 (0.973-0.977), respectively, and the AUC was 0.984 (0.978-0.989). For the validation dataset and test dataset, the AUC was 0.977 (0.968-0.986) and 0.987 (0.982-0.992), respectively. In the subgroup analysis of ROP vs. normal and differentiation of two ROP grades, the AUC was 0.990 (0.944-0.994) and 0.982 (0.964-0.999), respectively. Conclusions Our study shows that DL models can play an essential role in detecting and grading ROP with high sensitivity, specificity, and repeatability. The application of a DL-based automated system may improve ROP screening and diagnosis in the future.
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Ghosh SK, Ghosh A. A novel retinal image segmentation using rSVM boosted convolutional neural network for exudates detection. Biomed Signal Process Control 2021. [DOI: 10.1016/j.bspc.2021.102785] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Viladés E, Pérez-del Palomar A, Cegoñino J, Obis J, Satue M, Orduna E, Pablo LE, Ciprés M, Garcia-Martin E. Physiological changes in retinal layers thicknesses measured with swept source optical coherence tomography. PLoS One 2020; 15:e0240441. [PMID: 33052946 PMCID: PMC7556480 DOI: 10.1371/journal.pone.0240441] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2020] [Accepted: 09/25/2020] [Indexed: 11/18/2022] Open
Abstract
PURPOSE To evaluate the physiological changes related with age of all retinal layers thickness measurements in macular and peripapillary areas in healthy eyes. METHODS Wide protocol scan (with a field of view of 12x9 cm) from Triton SS-OCT instrument (Topcon Corporation, Japan) was performed 463 heathy eyes from 463 healthy controls. This protocol allows to measure the thickness of the following layers: Retina, Retinal nerve fiber layer (RNFL), Ganglion cell layer (GCL +), GCL++ and choroid. In those layers, mean thickness was compared in four groups of ages: Group 1 (71 healthy subjects aged between 20 and 34 years); Group 2 (65 individuals aged 35-49 years), Group 3 (230 healthy controls aged 50-64 years) and Group 4 (97 healthy subjects aged 65-79 years). RESULTS The most significant thinning of all retinal layers occurs particularly in the transition from group 2 to group 3, especially in temporal superior quadrant at RNFL, GCL++ and retinal layers (p≤0.001), and temporal superior, temporal inferior, and temporal half in choroid layer (p<0.001). Curiously group 2 when compared with group 1 presents a significant thickening of RNFL in temporal superior quadrant (p = 0.001), inferior (p<0.001) and temporal (p = 0.001) halves, and also in nasal half in choroid layer (p = 0.001). CONCLUSIONS Excepting the RNFL, which shows a thickening until the third decade of life, the rest of the layers seem to have a physiological progressive thinning.
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Affiliation(s)
- Elisa Viladés
- Department of Ophthalmology, Miguel Servet University Hospital, Zaragoza, Spain
- Aragon Institute for Health Research (IIS Aragón), University of Zaragoza, Zaragoza, Spain
| | - Amaya Pérez-del Palomar
- Aragon Institute for Health Research (IIS Aragón), University of Zaragoza, Zaragoza, Spain
- Mechanical Engineering Department, Aragon Institute of Engineering Research, University of Zaragoza, Zaragoza, Spain
| | - José Cegoñino
- Aragon Institute for Health Research (IIS Aragón), University of Zaragoza, Zaragoza, Spain
- Mechanical Engineering Department, Aragon Institute of Engineering Research, University of Zaragoza, Zaragoza, Spain
| | - Javier Obis
- Department of Ophthalmology, Miguel Servet University Hospital, Zaragoza, Spain
| | - María Satue
- Department of Ophthalmology, Miguel Servet University Hospital, Zaragoza, Spain
- Aragon Institute for Health Research (IIS Aragón), University of Zaragoza, Zaragoza, Spain
| | - Elvira Orduna
- Department of Ophthalmology, Miguel Servet University Hospital, Zaragoza, Spain
- Aragon Institute for Health Research (IIS Aragón), University of Zaragoza, Zaragoza, Spain
| | - Luis E. Pablo
- Department of Ophthalmology, Miguel Servet University Hospital, Zaragoza, Spain
- Aragon Institute for Health Research (IIS Aragón), University of Zaragoza, Zaragoza, Spain
| | - Marta Ciprés
- Department of Ophthalmology, Miguel Servet University Hospital, Zaragoza, Spain
- Aragon Institute for Health Research (IIS Aragón), University of Zaragoza, Zaragoza, Spain
| | - Elena Garcia-Martin
- Department of Ophthalmology, Miguel Servet University Hospital, Zaragoza, Spain
- Aragon Institute for Health Research (IIS Aragón), University of Zaragoza, Zaragoza, Spain
- * E-mail:
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Palanivel DA, Natarajan S, Gopalakrishnan S. Retinal vessel segmentation using multifractal characterization. Appl Soft Comput 2020. [DOI: 10.1016/j.asoc.2020.106439] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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Primitivo D, Alma R, Erik C, Arturo V, Edgar C, Marco PC, Daniel Z. A hybrid method for blood vessel segmentation in images. Biocybern Biomed Eng 2019. [DOI: 10.1016/j.bbe.2019.06.009] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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