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Albiges T, Sabeur Z, Arbab-Zavar B. Compressed Sensing Data with Performing Audio Signal Reconstruction for the Intelligent Classification of Chronic Respiratory Diseases. SENSORS (BASEL, SWITZERLAND) 2023; 23:1439. [PMID: 36772480 PMCID: PMC9921371 DOI: 10.3390/s23031439] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/02/2022] [Revised: 01/23/2023] [Accepted: 01/25/2023] [Indexed: 06/18/2023]
Abstract
Chronic obstructive pulmonary disease (COPD) concerns the serious decline of human lung functions. These have emerged as one of the most concerning health conditions over the last two decades, after cancer around the world. The early diagnosis of COPD, particularly of lung function degradation, together with monitoring the condition by physicians, and predicting the likelihood of exacerbation events in individual patients, remains an important challenge to overcome. The requirements for achieving scalable deployments of data-driven methods using artificial intelligence for meeting such a challenge in modern COPD healthcare have become of paramount and critical importance. In this study, we have established the experimental foundations for acquiring and indeed generating biomedical observation data, for good performance signal analysis and machine learning that will lead us to the intelligent diagnosis and monitoring of COPD conditions for individual patients. Further, we investigated on the multi-resolution analysis and compression of lung audio signals, while we performed their machine classification under two distinct experiments. These respectively refer to conditions involving (1) "Healthy" or "COPD" and (2) "Healthy", "COPD", or "Pneumonia" classes. Signal reconstruction with the extracted features for machine learning and testing was also performed for securing the integrity of the original audio recordings. These showed high levels of accuracy together with the performances of the selected machine learning-based classifiers using diverse metrics. Our study shows promising levels of accuracy in classifying Healthy and COPD and also Healthy, COPD, and Pneumonia conditions. Further work in this study will be imminently extended to new experiments using multi-modal sensing hardware and data fusion techniques for the development of the next generation diagnosis systems for COPD healthcare of the future.
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A Neural Network-Based Method for Respiratory Sound Analysis and Lung Disease Detection. APPLIED SCIENCES-BASEL 2022. [DOI: 10.3390/app12083877] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
Abstract
Background: Respiratory sound analysis represents a research topic of growing interest in recent times. In fact, in this area, there is the potential to automatically infer the abnormalities in the preliminary stages of a lung dysfunction. Methods: In this paper, we propose a method to analyse respiratory sounds in an automatic way. The aim is to show the effectiveness of machine learning techniques in respiratory sound analysis. A feature vector is gathered directly from breath audio and, thus, by exploiting supervised machine learning techniques, we detect if the feature vector is related to a patient affected by a lung disease. Moreover, the proposed method is able to characterise the lung disease in asthma, bronchiectasis, bronchiolitis, chronic obstructive pulmonary disease, pneumonia, and lower or upper respiratory tract infection. Results: A retrospective experimental analysis on 126 patients with 920 recording sessions showed the effectiveness of the proposed method. Conclusion: The experimental analysis demonstrated that it is possible to detect lung disease by exploiting machine learning techniques. We considered several supervised machine learning algorithms, obtaining the most interesting performance with the neural network model, with an F-Measure of 0.983 in lung disease detection and equal to 0.923 in lung disease characterisation, increasing the state-of-the-art performance.
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McLane I, Lauwers E, Stas T, Busch-Vishniac I, Ides K, Verhulst S, Steckel J. Comprehensive Analysis System for Automated Respiratory Cycle Segmentation and Crackle Peak Detection. IEEE J Biomed Health Inform 2021; 26:1847-1860. [PMID: 34705660 DOI: 10.1109/jbhi.2021.3123353] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
Digital auscultation is a well-known method for assessing lung sounds, but remains a subjective process in typical practice, relying on the human interpretation. Several methods have been presented for detecting or analyzing crackles but are limited in their real-world application because few have been integrated into comprehensive systems or validated on non-ideal data. This work details a complete signal analysis methodology for analyzing crackles in challenging recordings. The procedure comprises five sequential processing blocks: (1) motion artifact detection, (2) deep learning denoising network, (3) respiratory cycle segmentation, (4) separation of discontinuous adventitious sounds from vesicular sounds, and (5) crackle peak detection. This system uses a collection of new methods and robustness-focused improvements on previous methods to analyze respiratory cycles and crackles therein. To validate the accuracy, the system is tested on a database of 1000 simulated lung sounds with varying levels of motion artifacts, ambient noise, cycle lengths and crackle intensities, in which ground truths are exactly known. The system performs with average F-score of 91.07% for detecting motion artifacts and 94.43% for respiratory cycle extraction, and an overall F-score of 94.08% for detecting the locations of individual crackles. The process also successfully detects healthy recordings. Preliminary validation is also presented on a small set of 20 patient recordings, for which the system performs comparably. These methods provide quantifiable analysis of respiratory sounds to enable clinicians to distinguish between types of crackles, their timing within the respiratory cycle, and the level of occurrence. Crackles are one of the most common abnormal lung sounds, presenting in multiple cardiorespiratory diseases. These features will contribute to a better understanding of disease severity and progression in an objective, simple and non-invasive way.
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Multi-channel lung sounds intelligent diagnosis of chronic obstructive pulmonary disease. BMC Pulm Med 2021; 21:321. [PMID: 34654400 PMCID: PMC8518292 DOI: 10.1186/s12890-021-01682-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2021] [Accepted: 09/29/2021] [Indexed: 11/10/2022] Open
Abstract
Background Chronic obstructive pulmonary disease (COPD) is a chronic respiratory disease that seriously threatens people’s health, with high morbidity and mortality worldwide. At present, the clinical diagnosis methods of COPD are time-consuming, invasive, and radioactive. Therefore, it is urgent to develop a non-invasive and rapid COPD severity diagnosis technique suitable for daily screening in clinical practice. Results This study established an effective model for the preliminary diagnosis of COPD severity using lung sounds with few channels. Firstly, the time-frequency-energy features of 12 channels lung sounds were extracted by Hilbert–Huang transform. And then, channels and features were screened by the reliefF algorithm. Finally, the feature sets were input into a support vector machine to diagnose COPD severity, and the performance with Bayes, decision tree, and deep belief network was compared. Experimental results show that high classification performance using only 4-channel lung sounds of L1, L2, L3, and L4 channels can be achieved by the proposed model. The accuracy, sensitivity, and specificity of mild COPD and moderate + severe COPD were 89.13%, 87.72%, and 91.01%, respectively. The classification performance rates of moderate COPD and severe COPD were 94.26%, 97.32%, and 89.93% for accuracy, sensitivity, and specificity, respectively. Conclusion This model provides a standardized evaluation with high classification performance rates, which can assist doctors to complete the preliminary diagnosis of COPD severity immediately, and has important clinical significance.
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Multi-Time-Scale Features for Accurate Respiratory Sound Classification. APPLIED SCIENCES-BASEL 2020. [DOI: 10.3390/app10238606] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
The COVID-19 pandemic has amplified the urgency of the developments in computer-assisted medicine and, in particular, the need for automated tools supporting the clinical diagnosis and assessment of respiratory symptoms. This need was already clear to the scientific community, which launched an international challenge in 2017 at the International Conference on Biomedical Health Informatics (ICBHI) for the implementation of accurate algorithms for the classification of respiratory sound. In this work, we present a framework for respiratory sound classification based on two different kinds of features: (i) short-term features which summarize sound properties on a time scale of tenths of a second and (ii) long-term features which assess sounds properties on a time scale of seconds. Using the publicly available dataset provided by ICBHI, we cross-validated the classification performance of a neural network model over 6895 respiratory cycles and 126 subjects. The proposed model reached an accuracy of 85%±3% and an precision of 80%±8%, which compare well with the body of literature. The robustness of the predictions was assessed by comparison with state-of-the-art machine learning tools, such as the support vector machine, Random Forest and deep neural networks. The model presented here is therefore suitable for large-scale applications and for adoption in clinical practice. Finally, an interesting observation is that both short-term and long-term features are necessary for accurate classification, which could be the subject of future studies related to its clinical interpretation.
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Pan Q, Brulin D, Campo E. Current Status and Future Challenges of Sleep Monitoring Systems: Systematic Review. JMIR BIOMEDICAL ENGINEERING 2020. [DOI: 10.2196/20921] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022] Open
Abstract
Background
Sleep is essential for human health. Considerable effort has been put into academic and industrial research and in the development of wireless body area networks for sleep monitoring in terms of nonintrusiveness, portability, and autonomy. With the help of rapid advances in smart sensing and communication technologies, various sleep monitoring systems (hereafter, sleep monitoring systems) have been developed with advantages such as being low cost, accessible, discreet, contactless, unmanned, and suitable for long-term monitoring.
Objective
This paper aims to review current research in sleep monitoring to serve as a reference for researchers and to provide insights for future work. Specific selection criteria were chosen to include articles in which sleep monitoring systems or devices are covered.
Methods
This review investigates the use of various common sensors in the hardware implementation of current sleep monitoring systems as well as the types of parameters collected, their position in the body, the possible description of sleep phases, and the advantages and drawbacks. In addition, the data processing algorithms and software used in different studies on sleep monitoring systems and their results are presented. This review was not only limited to the study of laboratory research but also investigated the various popular commercial products available for sleep monitoring, presenting their characteristics, advantages, and disadvantages. In particular, we categorized existing research on sleep monitoring systems based on how the sensor is used, including the number and type of sensors, and the preferred position in the body. In addition to focusing on a specific system, issues concerning sleep monitoring systems such as privacy, economic, and social impact are also included. Finally, we presented an original sleep monitoring system solution developed in our laboratory.
Results
By retrieving a large number of articles and abstracts, we found that hotspot techniques such as big data, machine learning, artificial intelligence, and data mining have not been widely applied to the sleep monitoring research area. Accelerometers are the most commonly used sensor in sleep monitoring systems. Most commercial sleep monitoring products cannot provide performance evaluation based on gold standard polysomnography.
Conclusions
Combining hotspot techniques such as big data, machine learning, artificial intelligence, and data mining with sleep monitoring may be a promising research approach and will attract more researchers in the future. Balancing user acceptance and monitoring performance is the biggest challenge in sleep monitoring system research.
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Automated extraction of fine and coarse crackles by independent component analysis. HEALTH AND TECHNOLOGY 2020. [DOI: 10.1007/s12553-019-00365-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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Reyes BA, Olvera-Montes N, Charleston-Villalobos S, González-Camarena R, Mejía-Ávila M, Aljama-Corrales T. A Smartphone-Based System for Automated Bedside Detection of Crackle Sounds in Diffuse Interstitial Pneumonia Patients. SENSORS (BASEL, SWITZERLAND) 2018; 18:E3813. [PMID: 30405036 PMCID: PMC6263477 DOI: 10.3390/s18113813] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/28/2018] [Revised: 10/30/2018] [Accepted: 11/03/2018] [Indexed: 11/20/2022]
Abstract
In this work, we present a mobile health system for the automated detection of crackle sounds comprised by an acoustical sensor, a smartphone device, and a mobile application (app) implemented in Android. Although pulmonary auscultation with traditional stethoscopes had been used for decades, it has limitations for detecting discontinuous adventitious respiratory sounds (crackles) that commonly occur in respiratory diseases. The proposed app allows the physician to record, store, reproduce, and analyze respiratory sounds directly on the smartphone. Furthermore, the algorithm for crackle detection was based on a time-varying autoregressive modeling. The performance of the automated detector was analyzed using: (1) synthetic fine and coarse crackle sounds randomly inserted to the basal respiratory sounds acquired from healthy subjects with different signal to noise ratios, and (2) real bedside acquired respiratory sounds from patients with interstitial diffuse pneumonia. In simulated scenarios, for fine crackles, an accuracy ranging from 84.86% to 89.16%, a sensitivity ranging from 93.45% to 97.65%, and a specificity ranging from 99.82% to 99.84% were found. The detection of coarse crackles was found to be a more challenging task in the simulated scenarios. In the case of real data, the results show the feasibility of using the developed mobile health system in clinical no controlled environment to help the expert in evaluating the pulmonary state of a subject.
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Affiliation(s)
- Bersain A Reyes
- Faculty of Sciences, Universidad Autónoma de San Luis Potosí, San Luis Potosi 78290, Mexico.
| | - Nemecio Olvera-Montes
- Electrical Engineering Department, Universidad Autónoma Metropolitana Iztapalapa, Mexico City 09340, Mexico.
| | - Sonia Charleston-Villalobos
- Electrical Engineering Department, Universidad Autónoma Metropolitana Iztapalapa, Mexico City 09340, Mexico.
| | - Ramón González-Camarena
- Health Science Department, Universidad Autónoma Metropolitana Iztapalapa, Mexico City 09340, Mexico.
| | - Mayra Mejía-Ávila
- National Institute of Respiratory Diseases, Mexico City 14080, Mexico.
| | - Tomas Aljama-Corrales
- Electrical Engineering Department, Universidad Autónoma Metropolitana Iztapalapa, Mexico City 09340, Mexico.
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Speranza CG, Moraes R. Instantaneous frequency based index to characterize respiratory crackles. Comput Biol Med 2018; 102:21-29. [PMID: 30240835 DOI: 10.1016/j.compbiomed.2018.09.007] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2018] [Revised: 09/11/2018] [Accepted: 09/11/2018] [Indexed: 11/16/2022]
Abstract
BACKGROUND Crackle is a lung sound widely employed by health staff to identify respiratory diseases. The two-cycle duration (2CD) is a quantitative index pointed out by the American Thoracic Society and the European Respiratory Society to classify respiratory crackles as fine or coarse. However, this index, measured in the time domain, is highly affected by noise and filters of recording systems. Such factors hamper the analysis of data reported by different research groups. This work proposes a new index based on the instantaneous frequency of crackles estimated by means of discrete-time pseudo Wigner-Ville distribution. METHOD Comparisons between 2CD and the proposed index were carried out for simulated and actual crackles. Normal breathing sounds were added to simulated crackles; the resulting signals were then applied to a band-pass filter that mimics those belonging to lung sound acquisition systems. Thus, the impact of noise and filtering on these two indices was assessed for simulated crackles. Kruskal-Wallis and Dunn's tests as well as Gaussian mixture model (GMM) were applied to the two indices measured from 382 actual crackles belonging to open databases. RESULTS The proposed index is much less susceptible to waveform distortions due to noise and filtering when compared to the 2CD. Thus, the statistical analyses allow the identification of two classes of crackles from actual databases; the same does not occur when using 2CD. CONCLUSIONS The new proposed index has the potential to contribute for a better characterization of crackles generated by different respiratory diseases, assisting their diagnosis during clinical exams.
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Affiliation(s)
- Carlos G Speranza
- Electronic Academic Department (DAELN), Federal Institute of Santa Catarina (IFSC), Av. Mauro Ramos, 950, Florianopolis/SC, 88020-300, Brazil.
| | - Raimes Moraes
- Electrical and Electronic Engineering Department (EEL), Federal University of Santa Catarina (UFSC), Campus Universitario Reitor João David Ferreira Lima, Rua Delfino Conti, s/n, Trindade, Florianopolis/SC, 88040-370, Brazil.
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Albuerne-Sanchez L, Gonzalez-Camarena R, Mejia-Avila M, Carrillo-Rodriguez G, Aljama-Corrales T, Charleston-Villalobos S. Linear and Nonlinear Analysis of Base Lung Sound in Extrinsic Allergic Alveolitis Patients in Comparison to Healthy Subjects. Methods Inf Med 2018; 52:266-76. [DOI: 10.3414/me12-01-0037] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2012] [Accepted: 12/02/2012] [Indexed: 11/09/2022]
Abstract
SummaryObjective: Pulmonary disorders are frequently characterized by the presence of adventitious sounds added to the breathing or base lung sound (BLS). The aim of this work was to assess the features of BLS in extrinsic allergic alveolitis (EAA) patients in comparison to healthy subjects, applying linear and nonlinear analysis techniques.Methods: We investigated the multichannel lung sounds on the posterior chest of 16 females, 8 healthy and 8 EAA patients, when breathing at 1.5 L/s. BLS linear features were obtained from the power spectral density (PSD) while nonlinear features were extracted by the concepts of irregularity and complexity, i.e., spectral, sample and multi-scale entropy.Results: The results demonstrated that spectral percentiles of BLS were lower in EAA patients than in healthy subjects but statistical significance (p<0.05) was obtained only for expiration at the left apical and both basal regions. Also, the maximum amplitude of the PSD in patients reached statistical significance ( p < 0.05) for the expiratory phase at basal regions. In the case of nonlinear techniques, significant lower values ( p < 0.05) were obtained for EAA patients during both respiratory phases at left apical and both basal regions.Conclusion: In conclusion, we found that BLS in chronic EAA patients is characterized by lower spectral percentiles, lower irregularity and lower complexity than in healthy subjects suggesting the feasibility of its clinical usefulness by screening its temporal alteration.
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Foo DCG. An analysis of sounds for lungs with excessive water. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2017; 2016:3662-3665. [PMID: 28269088 DOI: 10.1109/embc.2016.7591522] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
Excessive lung water occurs when too much water accumulates in the lung, causing breathing difficulty. Current diagnosis methods include X-rays and CT-scans. However, because of their bulk and the need for trained professionals to operate, physicians rely on auscultation for preliminary diagnosis. Recent attempts have been made to automate the auscultation process and some degree of success has been reported. Thus, it would be useful to provide more analysis of such lung sounds. This paper attempts to study the characteristics of breathing sounds from lungs with excessive water and compare them with breathing sounds from healthy lungs. Using a modified empirical mode decomposition to split the signals, the root-mean-squared energy (RMS) and kurtosis were used as characteristics. These characteristics were extracted from the intrinsic mode functions (IMF) and were analyzed. Results showed that certain IMF were effective in characterizing both kinds of sounds due to their small spread in RMS or kurtosis. Results also (using p-values from statistical tests) showed that for certain intrinsic mode functions, lung sounds with excessive lung water exhibit different medians from sounds of healthy lungs. There was strong linear independence between each IMF of the two sounds. Empirical mode decomposition was shown to be able to extract useful information for analyses.
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Ulukaya S, Serbes G, Kahya YP. Resonance based respiratory sound decomposition aiming at localization of crackles in noisy measurements. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2017; 2016:3688-3691. [PMID: 28269094 DOI: 10.1109/embc.2016.7591528] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
In this work, resonance based decomposition of lung sounds that aims to separate wheeze, crackle and vesicular sounds into three individual channels while automatically localizing crackles for both synthetic and real data is presented. Previous works focus on stationary-non stationary discrimination to separate crackles and vesicular sounds disregarding wheezes which are stationary as compared to crackles. However, wheeze sounds include important cues about the underlying pathology. Using two different threshold methods and synthetic sound generation scenarios in the presence of wheezes, resonance based decomposition performs 89.5 % crackle localization recall rate for white Gaussian noise and 98.6 % crackle localization recall rate for healthy vesicular sound treated as noise at low signal-to-noise ratios. Besides, an adaptive threshold determination which is independent from the channel at which it will be applied is used and is found to be robust to noise.
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13
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Fault Diagnosis of Rotating Machinery Based on Empirical Mode Decomposition. SMART SENSORS, MEASUREMENT AND INSTRUMENTATION 2017. [DOI: 10.1007/978-3-319-56126-4_10] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/10/2023]
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14
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Quandt VI, Pacola ER, Pichorim SF, Gamba HR, Sovierzoski MA. Pulmonary crackle characterization: approaches in the use of discrete wavelet transform regarding border effect, mother-wavelet selection, and subband reduction. ACTA ACUST UNITED AC 2015. [DOI: 10.1590/2446-4740.0639] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Reyes BA, Charleston-Villalobos S, González-Camarena R, Aljama-Corrales T. Assessment of time-frequency representation techniques for thoracic sounds analysis. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2014; 114:276-290. [PMID: 24680639 DOI: 10.1016/j.cmpb.2014.02.016] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/17/2013] [Revised: 02/07/2014] [Accepted: 02/24/2014] [Indexed: 06/03/2023]
Abstract
A step forward in the knowledge about the underlying physiological phenomena of thoracic sounds requires a reliable estimate of their time-frequency behavior that overcomes the disadvantages of the conventional spectrogram. A more detailed time-frequency representation could lead to a better feature extraction for diseases classification and stratification purposes, among others. In this respect, the aim of this study was to look for an omnibus technique to obtain the time-frequency representation (TFR) of thoracic sounds by comparing generic goodness-of-fit criteria in different simulated thoracic sounds scenarios. The performance of ten TFRs for heart, normal tracheal and adventitious lung sounds was assessed using time-frequency patterns obtained by mathematical functions of the thoracic sounds. To find the best TFR performance measures, such as the 2D local (ρ(mean)) and global (ρ) central correlation, the normalized root-mean-square error (NRMSE), the cross-correlation coefficient (ρ(IF)) and the time-frequency resolution (res(TF)) were used. Simulation results pointed out that the Hilbert-Huang spectrum (HHS) had a superior performance as compared with other techniques and then, it can be considered as a reliable TFR for thoracic sounds. Furthermore, the goodness of HHS was assessed using noisy simulated signals. Additionally, HHS was applied to first and second heart sounds taken from a young healthy male subject, to tracheal sound from a middle-age healthy male subject, and to abnormal lung sounds acquired from a male patient with diffuse interstitial pneumonia. It is expected that the results of this research could be used to obtain a better signature of thoracic sounds for pattern recognition purpose, among other tasks.
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Affiliation(s)
- B A Reyes
- Electrical Engineering Department, Universidad Autonoma Metropolitana, Mexico City 09340, Mexico
| | - S Charleston-Villalobos
- Electrical Engineering Department, Universidad Autonoma Metropolitana, Mexico City 09340, Mexico.
| | - R González-Camarena
- Health Science Department, Universidad Autonoma Metropolitana, Mexico City 09340, Mexico
| | - T Aljama-Corrales
- Electrical Engineering Department, Universidad Autonoma Metropolitana, Mexico City 09340, Mexico
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Castañeda-Villa N, Charleston-Villalobos S, González-Camarena R, Aljama-Corrales T. Assessment of ICA algorithms for the analysis of crackles sounds. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2013; 2012:605-8. [PMID: 23365965 DOI: 10.1109/embc.2012.6346004] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
Blind source separation by independent component analysis has been applied extensively in the biomedical field for extracting different contributing sources in a signal. Regarding lung sounds analysis to isolate the adventitious sounds from normal breathing sound is relevant. In this work the performance of FastICA, Infomax, JADE and TDSEP algorithms was assessed using different scenarios including simulated fine and coarse crackles embedded in recorded normal breathing sounds. Our results pointed out that Infomax obtained the minimum Amari index (0.10037) and the maximum signal to interference ratio (1.4578e+009). Afterwards, Infomax was applied to 25 channels of recorded normal breathing sound where simulated fine and coarse crackles were added including acoustic propagation effects. A robust blind crackle separation could improve previous results in generating an adventitious acoustic thoracic imaging.
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Affiliation(s)
- N Castañeda-Villa
- Electrical Engineering Department, Universidad Autónoma Metropolitana, Mexico City 09340, Mexico.
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Fontecave-Jallon J, Videlier B, Baconnier P, Tanguy S, Calabrese P, Guméry PY. Detecting variations of blood volume shift due to heart beat from respiratory inductive plethysmography measurements in man. Physiol Meas 2013; 34:1085-101. [PMID: 23954865 DOI: 10.1088/0967-3334/34/9/1085] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
The simultaneous study of the cardiac and respiratory activities and their interactions is of great physiological and clinical interest. For this purpose, we want to investigate if respiratory inductive plethysmography (RIP) can be used for cardiac functional exploration. We propose a system, based on RIP technology and time-scale approaches of signal processing, for the extraction of cardiac information. This study focuses on the monitoring of blood volume shift due to heart beat, noted ▵Vtr_c and investigates RIP for the detection of ▵Vtr_c variations by comparison to stroke volume (SV) variations estimated by impedance cardiography (IMP). We proposed a specific respiratory protocol assumed to induce significant variations of the SV. Fifteen healthy volunteers in the seated and supine positions were asked to alternate rest respiration and maneuvers, consisting in blowing into a manometer. A multi-step treatment including a variant of empirical mode decomposition was applied on RIP signals to extract cardiac volume signals and estimate beat-to-beat ▵Vtr_c. These were averaged in quasi-stationary states at rest and during the respiratory maneuvers, and analysed in view of SV estimations from IMP signals simultaneously acquired. Correlation and statistical tests over the data show that RIP can be used to detect variations of the cardiac blood shift in healthy young subjects.
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Affiliation(s)
- J Fontecave-Jallon
- University Joseph Fourier-Grenoble 1, CNRS, TIMC-IMAG Laboratory CNRS UMR 5525, PRETA team, Grenoble, F-38041, France.
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Rosas-Cholula G, Ramirez-Cortes JM, Alarcon-Aquino V, Gomez-Gil P, Rangel-Magdaleno JDJ, Reyes-Garcia C. Gyroscope-driven mouse pointer with an EMOTIV® EEG headset and data analysis based on Empirical Mode Decomposition. SENSORS 2013; 13:10561-83. [PMID: 23948873 PMCID: PMC3812618 DOI: 10.3390/s130810561] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/30/2013] [Revised: 08/02/2013] [Accepted: 08/06/2013] [Indexed: 11/17/2022]
Abstract
This paper presents a project on the development of a cursor control emulating the typical operations of a computer-mouse, using gyroscope and eye-blinking electromyographic signals which are obtained through a commercial 16-electrode wireless headset, recently released by Emotiv. The cursor position is controlled using information from a gyroscope included in the headset. The clicks are generated through the user's blinking with an adequate detection procedure based on the spectral-like technique called Empirical Mode Decomposition (EMD). EMD is proposed as a simple and quick computational tool, yet effective, aimed to artifact reduction from head movements as well as a method to detect blinking signals for mouse control. Kalman filter is used as state estimator for mouse position control and jitter removal. The detection rate obtained in average was 94.9%. Experimental setup and some obtained results are presented.
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Affiliation(s)
- Gerardo Rosas-Cholula
- Department of Electronics, National Institute of Astrophysics, Optics and Electronics, Luis Enrique Erro No. 1, Tonantzintla, Puebla 72760, Mexico; E-Mails: (G.R.-C.); (J.J.R.-M.)
| | - Juan Manuel Ramirez-Cortes
- Department of Electronics, National Institute of Astrophysics, Optics and Electronics, Luis Enrique Erro No. 1, Tonantzintla, Puebla 72760, Mexico; E-Mails: (G.R.-C.); (J.J.R.-M.)
- Author to whom correspondence should be addressed; E-Mail: ; Tel.: +52-222-266-3100; Fax: +52-222-247-2580
| | - Vicente Alarcon-Aquino
- Department of Electronics and Computer Science, Exhda. Sta. Catarina Martir, Cholula, University of the Americas, Puebla, Puebla 72720, Mexico; E-Mail:
| | - Pilar Gomez-Gil
- Department of Computer Science, National Institute of Astrophysics, Optics and Electronics, Luis Enrique Erro No. 1, Tonantzintla, Puebla 72760, Mexico; E-Mails: (P.G.-G.); (C.R.-G.)
| | - Jose de Jesus Rangel-Magdaleno
- Department of Electronics, National Institute of Astrophysics, Optics and Electronics, Luis Enrique Erro No. 1, Tonantzintla, Puebla 72760, Mexico; E-Mails: (G.R.-C.); (J.J.R.-M.)
| | - Carlos Reyes-Garcia
- Department of Computer Science, National Institute of Astrophysics, Optics and Electronics, Luis Enrique Erro No. 1, Tonantzintla, Puebla 72760, Mexico; E-Mails: (P.G.-G.); (C.R.-G.)
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Ponte DF, Moraes R, Hizume DC, Alencar AM. Characterization of crackles from patients with fibrosis, heart failure and pneumonia. Med Eng Phys 2013; 35:448-56. [DOI: 10.1016/j.medengphy.2012.06.009] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2011] [Revised: 04/12/2012] [Accepted: 06/15/2012] [Indexed: 11/25/2022]
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20
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Fontecave-Jallon J, Guméry PY, Calabrese P, Briot R, Baconnier P. A Wearable Technology Revisited for Cardio-Respiratory Functional Exploration. INTERNATIONAL JOURNAL OF E-HEALTH AND MEDICAL COMMUNICATIONS 2013. [DOI: 10.4018/jehmc.2013010102] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
Abstract
The objective of the present study is to extract new information from complex signals generated by Respiratory Inductive Plethysmography (RIP). This indirect cardio-respiratory (CR) measure is a well-known wearable solution. The authors applied time-scale analysis to estimate cardiac activity from thoracic volume variations, witnesses of CR interactions. Calibrated RIP signals gathered from 4 healthy volunteers in resting conditions are processed by Ensemble Empirical Mode Decomposition to extract cardiac volume signals and estimate stroke volumes. Averaged values of these stroke volumes (SVRIP) are compared with averaged values of stroke volumes determined simultaneously by electrical impedance cardiography (SVICG). There is a satisfactory correlation between SVRIP and SVICG (r=0.76, p<0.001) and the limits of agreement between the 2 types of measurements (±23%) satisfies the required criterion (±30%). The observed under-estimation (-58%) is argued. This validates the use of RIP for following stroke volume variations and suggests that one simple transducer can provide a quantitative exploration of both ventilatory and cardiac volumes.
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Affiliation(s)
- Julie Fontecave-Jallon
- University Joseph Fourier-Grenoble 1, CNRS, TIMC-IMAG Laboratory CNRS UMR 5525, PRETA team, Grenoble, F-38041, France
| | - Pierre-Yves Guméry
- University Joseph Fourier-Grenoble 1, CNRS, TIMC-IMAG Laboratory CNRS UMR 5525, PRETA team, Grenoble, F-38041, France
| | - Pascale Calabrese
- University Joseph Fourier-Grenoble 1, CNRS, TIMC-IMAG Laboratory CNRS UMR 5525, PRETA team, Grenoble, F-38041, France
| | - Raphaël Briot
- University Joseph Fourier-Grenoble 1, CNRS, TIMC-IMAG Laboratory CNRS UMR 5525, PRETA team, Grenoble, F-38041, France
| | - Pierre Baconnier
- University Joseph Fourier-Grenoble 1, CNRS, TIMC-IMAG Laboratory CNRS UMR 5525, PRETA team, Grenoble, F-38041, France
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21
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Castañeda-Villa S, Castaneda-Villa N, Gonzalez-Camarena R, Mejia-Avila M, Aljama-Corrales T. Adventitious lung sounds imaging by ICA-TVAR scheme. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2013; 2013:1354-1357. [PMID: 24109947 DOI: 10.1109/embc.2013.6609760] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
Adventitious lung sounds (ALS) as crackles and wheezes are present in different lung alterations and their automated characterization and recognition have become relevant. In fact, recently their 2D spatial distribution (SD) imaging has been proposed to help diagnose of pulmonary diseases. In this work, independent component analysis (ICA) by infomax was used to find crackles sources and from them to apply a time variant autoregressive model (TVAR) to count and imaging the ALS. The proposed methodology was assessed on multichannel LS recordings by embedding simulated fine crackles with known SD in recorded normal breathing sounds. Afterwards, the adventitious image of two patients with fibrosis and emphysema were obtained and contrasted with the classical pulmonary auscultation provided by a pneumologist. The results showed that combining ICA and TVAR leads to a robust methodology to imaging ALS.
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Van Nort D, Braasch J, Oliveros P. Sound texture recognition through dynamical systems modeling of empirical mode decomposition. THE JOURNAL OF THE ACOUSTICAL SOCIETY OF AMERICA 2012; 132:2734-2744. [PMID: 23039465 DOI: 10.1121/1.4751535] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
This paper describes a system for modeling, recognizing, and classifying sound textures. The described system translates contemporary approaches from video texture analysis, creating a unique approach in the realm of audio and music. The signal is first represented as a set of mode functions by way of the Empirical Mode Decomposition technique for time/frequency analysis, before expressing the dynamics of these modes as a linear dynamical system (LDS). Both linear and nonlinear techniques are utilized in order to learn the system dynamics, which leads to a successful distinction between unique classes of textures. Five classes of sounds comprised a data set, consisting of crackling fire, typewriter action, rainstorms, carbonated beverages, and crowd applause, drawing on a variety of source recordings. Based on this data set the system achieved a classification accuracy of 90%, which outperformed both a Mel-Frequency Cepstral Coefficient based LDS-modeling approach from the literature, as well as one based on a standard Gaussian Mixture Model classifier.
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Affiliation(s)
- Doug Van Nort
- School of Architecture and Electronic Arts Department, Rensselaer Polytechnic Institute, 110 8th Street, Troy, New York 12180, USA.
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23
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Karagiannis A, Constantinou P. A prediction model for the number of intrinsic mode functions in biomedical signals: The case of electrocardiogram. Biomed Signal Process Control 2011. [DOI: 10.1016/j.bspc.2011.02.005] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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24
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Charleston-Villalobos S, Martinez-Hernandez G, Gonzalez-Camarena R, Chi-Lem G, Carrillo J, Aljama-Corrales T. Assessment of multichannel lung sounds parameterization for two-class classification in interstitial lung disease patients. Comput Biol Med 2011; 41:473-82. [PMID: 21571265 DOI: 10.1016/j.compbiomed.2011.04.009] [Citation(s) in RCA: 35] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2010] [Revised: 12/07/2010] [Accepted: 04/18/2011] [Indexed: 10/18/2022]
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25
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Karagiannis A, Constantinou P. Noise-assisted data processing with empirical mode decomposition in biomedical signals. ACTA ACUST UNITED AC 2010; 15:11-8. [PMID: 21075730 DOI: 10.1109/titb.2010.2091648] [Citation(s) in RCA: 51] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
In this paper, a methodology is described in order to investigate the performance of empirical mode decomposition (EMD) in biomedical signals, and especially in the case of electrocardiogram (ECG). Synthetic ECG signals corrupted with white Gaussian noise are employed and time series of various lengths are processed with EMD in order to extract the intrinsic mode functions (IMFs). A statistical significance test is implemented for the identification of IMFs with high-level noise components and their exclusion from denoising procedures. Simulation campaign results reveal that a decrease of processing time is accomplished with the introduction of preprocessing stage, prior to the application of EMD in biomedical time series. Furthermore, the variation in the number of IMFs according to the type of the preprocessing stage is studied as a function of SNR and time-series length. The application of the methodology in MIT-BIH ECG records is also presented in order to verify the findings in real ECG signals.
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Affiliation(s)
- Alexandros Karagiannis
- Mobile Radio Communications Laboratory, Electrical and Computer Engineering Department, National Technical University of Athens, Athens, Attiki GR-15773,
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26
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Acoustic thoracic image of crackle sounds using linear and nonlinear processing techniques. Med Biol Eng Comput 2010; 49:15-24. [DOI: 10.1007/s11517-010-0663-5] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2010] [Accepted: 07/04/2010] [Indexed: 10/19/2022]
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27
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Caseiro P, Fonseca-Pinto R, Andrade A. Screening of obstructive sleep apnea using Hilbert-Huang decomposition of oronasal airway pressure recordings. Med Eng Phys 2010; 32:561-8. [PMID: 20447855 DOI: 10.1016/j.medengphy.2010.01.008] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2009] [Revised: 12/11/2009] [Accepted: 01/30/2010] [Indexed: 11/24/2022]
Abstract
Polysomnographic signals are usually recorded from patients exhibiting symptoms related to sleep disorders such as obstructive sleep apnea (OSA). Analysis of polysomnographic data allows for the determination of the type and severity of sleep apnea or other sleep-related disorders by a specialist or technician. The usual procedure entails an overnight recording several hours long. This paper presents a methodology to help with the screening of OSA using a 5-min oronasal airway pressure signal emanating from a polysomnographic recording during the awake period, eschewing the need for an overnight recording. The clinical sample consisted of a total of 41 subjects, 20 non-OSA individuals and 21 individuals with OSA. A signal analysis technique based on the Hilbert-Huang transform was used to extract intrinsic oscillatory modes from the signals. The frequency distribution of both the first mode and second mode and their sum were shown to differ significantly between non-OSA subjects and OSA patients. An index measure based on the distribution frequencies of the oscillatory modes yielded a sensitivity of 81.0% (for 95% specificity) for the detection of OSA. Two other index measures based on the relation between the area and the maximum of the 1st and 2nd halves of the frequency histogram both yielded a sensitivity of 76.2% (for 95% specificity). Although further tests will be needed to test the reproducibility of these results, the proposed measures seem to provide a fast method to screen OSA patients, thus reducing the costs and the waiting time for diagnosis.
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Affiliation(s)
- P Caseiro
- Institute of Biophysics and Biomedical Engineering, Faculty of Sciences, University of Lisbon, Campo Grande, 1749-016 Lisbon, Portugal.
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28
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Abdulhay E, Guméry PY, Fontecave J, Baconnier P. Cardiogenic oscillations extraction in inductive plethysmography: Ensemble empirical mode decomposition. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2010; 2009:2240-3. [PMID: 19965156 DOI: 10.1109/iembs.2009.5335004] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
The purpose of this study is to investigate the potential of the ensemble empirical mode decomposition (EEMD) to extract cardiogenic oscillations from inductive plethysmography signals in order to measure cardiac stroke volume. First, a simple cardio-respiratory model is used to simulate cardiac, respiratory, and cardio-respiratory signals. Second, application of empirical mode decomposition (EMD) to simulated cardio-respiratory signals demonstrates that the mode mixing phenomenon affects the extraction performance and hence also the cardiac stroke volume measurement. Stroke volume is measured as the amplitude of extracted cardiogenic oscillations, and it is compared to the stroke volume of simulated cardiac activity. Finally, we show that the EEMD leads to mode mixing removal.
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Affiliation(s)
- Enas Abdulhay
- PRETA team, TIMC-IMAG, Joseph Fourier University, La Tronche, France.
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29
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Reyes BA, Charleston-Villalobos S, Gonzalez-Camarena R, Aljama-Corrales T. Analysis of discontinuous adventitious lung sounds by Hilbert-Huang spectrum. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2009; 2008:3620-3. [PMID: 19163493 DOI: 10.1109/iembs.2008.4649990] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
It is now widely accepted that crackles are associated with different pulmonary pathologies and different efforts have been done to detect and to extract them. Consequently, due to the difficulty for their characterization, the selection of an adequate time-frequency representation (TFR) for the analysis of their time-frequency dynamics is important. Traditionally, normal and abnormal lung sounds have been analyzed by the Spectrogram (SP). However, this analysis tool has certain disadvantages when one deals with nonstationary signals. As an effort to point out the appropriate analysis tool for crackles, this paper shows the performance of the Hilbert-Huang spectrum (HHS) for the analysis of fine and coarse crackles, simulated and real ones. The HHS allowed to analyze the evolving time-frequency of crackle sounds straightforward with good resolution compared with SP. Beside this enhanced time-frequency course, HHS could be useful to establish a signature to detect and separate fine from coarse crackles in order to screen pathologies and their progress during medication.
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Affiliation(s)
- B A Reyes
- Biomedical Engineering Program, Universidad Autónoma Metropolitana, Mexico City 09340, Mexico.
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30
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Albuerne-Sánchez L, Charleston-Villalobos S, González-Camarena R, Chi-Lem G, Carrillo JG, Aljama-Corrales T. Base lung sound in diffuse interstitial pneumonia analyzed by linear and nonlinear techniques. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2009; 2008:1615-8. [PMID: 19162985 DOI: 10.1109/iembs.2008.4649482] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
Abnormal lung sounds in diffuse interstitial pneumonia have been characterized by the presence of crackles. However, few attempts have tried to analyze the sound where crackles are immersed. In this work base lung sounds (BLS) were analyzed by linear and nonlinear techniques to find possible differences between normal subjects and patients with diffuse interstitial pneumonia. In both groups, segments of lung sounds (crackles absent) and segments of BLS (lung sound in between crackles) were analyzed from acquired lung sounds from four points at the posterior chest, two apical and two basal. In this study, 8 healthy subjects and 8 patients participated and BLS were analyzed by spectral percentiles and sample entropy. Although spectral percentiles and sample entropy (SampEn) tended to be lower in the group of patients, statistical differences (p0.05) between normal subjects and patients were found in BLS at the left hemithorax at basal and apical regions, while at the right hemithorax significant differences were found only at the basal region using the nonlinear technique. We conclude that in respect to normal subjects, BLS of patients with diffuse interstitial pneumonia present differences as assessed by SampEn, so that BLS by itself provides useful information. Moreover, it seems that nonlinear technique did a better discrimination of abnormal BLS than spectral percentile parameters.
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Affiliation(s)
- L Albuerne-Sánchez
- Biomedical Engineering Program, Universidad Autónoma Metropolitana, Mexico City 09340, Mexico.
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31
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Reichert S, Gass R, Brandt C, Andrès E. Analysis of respiratory sounds: state of the art. CLINICAL MEDICINE. CIRCULATORY, RESPIRATORY AND PULMONARY MEDICINE 2008; 2:45-58. [PMID: 21157521 PMCID: PMC2990233 DOI: 10.4137/ccrpm.s530] [Citation(s) in RCA: 100] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
OBJECTIVE This paper describes state of the art, scientific publications and ongoing research related to the methods of analysis of respiratory sounds. METHODS AND MATERIAL Review of the current medical and technological literature using Pubmed and personal experience. RESULTS The study includes a description of the various techniques that are being used to collect auscultation sounds, a physical description of known pathologic sounds for which automatic detection tools were developed. Modern tools are based on artificial intelligence and on technics such as artificial neural networks, fuzzy systems, and genetic algorithms… CONCLUSION The next step will consist in finding new markers so as to increase the efficiency of decision aid algorithms and tools.
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Affiliation(s)
- Sandra Reichert
- Ph.D., e-health UTBM student, Alcatel-Lucent, Chief Technical Office, Strasbourg, France
| | - Raymond Gass
- Technical Academy Fellow, Alcatel-Lucent, Chief Technical Office, Strasbourg, France
| | - Christian Brandt
- M.D., Head of the Cardiology Department, Clinique Médicale B, CHRU Strasbourg, Strasbourg, France
| | - Emmanuel Andrès
- M.D., Ph.D., Head of the Internal Medicine Department, Clinique Médicale B, CHRU Strasbourg, Strasbourg, France
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32
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Bu N, Ueno N, Fukuda O. Monitoring of respiration and heartbeat during sleep using a flexible piezoelectric film sensor and empirical mode decomposition. ACTA ACUST UNITED AC 2008; 2007:1362-6. [PMID: 18002217 DOI: 10.1109/iembs.2007.4352551] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Cardio-respiratory monitoring during sleep is one of the basic means for assessment of personal health, and has been widely used in diagnosis of sleep disorders. This paper proposes a novel method for non-invasive and unconstrained measurement of respiration and heartbeat during sleep. A flexible piezoelectric film sensor made of aluminum nitride (AlN) material is used in this study. This sensor measures pressure fluctuation due to respiration and heartbeat on the contact surface when a subject is lying on it. Since the AlN film sensor has good sensitivity, the pressure fluctuation measured can be further separated into signals corresponding to respiration and heartbeat, respectively. In the proposed method, the signal separation is achieved using an algorithm based on empirical mode decomposition (EMD). Experiments have been conducted with three subjects. The experimental results show that respiration and heartbeat signals can be successfully obtained with the proposed method.
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Affiliation(s)
- Nan Bu
- On-site Sensing and Diagnosis Research Laboratory, National Institute of Advanced Industrial Science and Technology (AIST), 807-1, Shuku-machi, Tosu, Saga, 841-0052, Japan.
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Dorantes-Méndez G, Charleston-Villalobos S, González-Camarena R, Chi-Lem G, Carrillo JG, Aljama-Corrales T. Crackles detection using a time-variant autoregressive model. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2008; 2008:1894-1897. [PMID: 19163059 DOI: 10.1109/iembs.2008.4649556] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
Several techniques have been explored to detect automatically fine and coarse crackles; however, the solution for automatic detection of crackles remains insufficient. The purpose of this work was to explore the capacity of the time-variant autoregressive (TVAR) model to detect and to provide an estimate number of fine and coarse crackles in lung sounds. Thus, simulated crackles inserted in normal lung sounds and real lung sounds containing adventitious sounds were processed with TVAR and by an expert that based crackle detection on time-expanded waveform-analysis. The coefficients of the TVAR were obtained by an adaptive filtering prediction scheme. The adaptive filter used the recursive least squares algorithm with a forgetting factor of 0.97 and the model order was four. TVAR model showed an efficiency to detect crackles over 90% even with crackles overlapping and amplitudes as low as 1.5 of the standard deviation of background lung sounds, where expert presented an efficiency around 30%. In conclusion, TVAR model is a proper alternative to detect and to provide an estimate number of fine and coarse crackles, even in presence of crackles overlapping and crackles with low amplitude, conditions where crackles detection based on time-expanded waveform-analysis reveals evident limitations.
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Affiliation(s)
- G Dorantes-Méndez
- Biomedical Engineering Program, Universidad Autónoma Metropolitana, Mexico City 09340, Mexico.
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34
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Dorantes-Mendez G, Charleston-Villalobos S, Gonzalez-Camarena R, Chi-Lem G, Aljama-Corrales T. Imaging of simulated crackle sounds distribution on the chest. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2008; 2008:4801-4804. [PMID: 19163790 DOI: 10.1109/iembs.2008.4650287] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
Crackles sounds have been associated with several pulmonary pathologies and diverse algorithms have been proposed for extracting and counting them from the acquired lung sound. These tasks depend among other factors, of the relation between the magnitude of the crackle and the background lung sound. In this work, we explore multivariate signal processing to deal with the tasks and propose a new concept, the discontinuous adventitious sounds imaging. The image formation is founded on the results of two proposed methodologies that use an autoregressive (AR) model. In the first case, the AR coefficients feed an artificial neural network (ANN) to classify temporal acoustic information as healthy or sick and; in the second case, a time-variant AR (TVAR) model, obtained by the RLS algorithm, permits to detect changes in the TVAR coefficients to be associated with the number of crackles. For AR-ANN, the ratio of the temporal windows classified as sick to the classified as healthy is used as an index to form the adventitious image, while for TVAR-RLS, an estimation of the number of crackles is obtained to form the corresponding image. The results indicated that fine and coarse crackles could be detected and counted even with very low crackle magnitude so that the formation of a crackle distribution image was consistent.
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Affiliation(s)
- G Dorantes-Mendez
- Master student of the Biomedical Engineering Program, Universidad Autónoma Metropolitana, Mexico City 09340, Mexico.
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